PF3D7_1017200 | enoyl-CoA hydratase-related protein, putative

_IDPredictionOTHERSPmTPCS_Position
PF3D7_1017200OTHER0.9348950.0000350.065070
No Results

  • Fasta :-

    >PF3D7_1017200 MLFKLKYLRKHNKIYDMIQLSKCKNGYVIKRSVRTSIFKDDDIYLNPQDIHNESLPKINY LNSGKLDEYVYNRNNIGMDTIIINSKYMNIKMINKLYKKLCDSEVNYTKRFIFLTSLYNN IFNYSYNLYDLLKILELYQKSKDIHYLNLFKKILQNTNDLAYLIFSYKKPIISYCNGKIK GSAGFLSFLANNSASFNHSSYTYNNLNYSFLPYGGISFILANLRANLGFYFALTGQVIQS SDLVWCGLTKRWISDESLELMEISSESQLEVSEQDAHILLEEHFLKIPEKYTLKNYEQVI HEHFKHNNLLTILKCLDQSRNSSDQNIKKWADETYQKIITLPPLATHLTFEILNILRNYK MELLKKAQVNKRLWNEMIKNSYKVPTTKEQISMNELKYTIDKELFIKSLNIETNTLLNFI SCPDILNGITSYLVKDTNHAFSSTYLNNNIFQIKKDIIYYFLFYKNSYEYNIYDRPDISY SSLSVLEKYNQHYNAEGNTSHDKLFFSKQFERWNDDYLQEELEDINKHFL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_1017200.fa Sequence name : PF3D7_1017200 Sequence length : 530 VALUES OF COMPUTED PARAMETERS Coef20 : 3.811 CoefTot : -1.296 ChDiff : 7 ZoneTo : 39 KR : 11 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.918 1.188 0.002 0.518 MesoH : 0.224 0.351 -0.223 0.302 MuHd_075 : 33.022 26.433 11.026 8.124 MuHd_095 : 31.651 17.347 6.024 6.894 MuHd_100 : 25.585 16.415 5.537 5.837 MuHd_105 : 42.774 20.419 10.905 8.703 Hmax_075 : 13.900 18.800 4.141 5.170 Hmax_095 : 9.800 15.300 1.132 3.937 Hmax_100 : 0.800 15.300 -3.066 2.710 Hmax_105 : 7.583 8.750 -0.151 4.177 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0337 0.9663 DFMC : 0.0891 0.9109 This protein is probably imported in mitochondria. f(Ser) = 0.0769 f(Arg) = 0.0769 CMi = 0.43290 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 530 PF3D7_1017200 MLFKLKYLRKHNKIYDMIQLSKCKNGYVIKRSVRTSIFKDDDIYLNPQDIHNESLPKINYLNSGKLDEYVYNRNNIGMDT 80 IIINSKYMNIKMINKLYKKLCDSEVNYTKRFIFLTSLYNNIFNYSYNLYDLLKILELYQKSKDIHYLNLFKKILQNTNDL 160 AYLIFSYKKPIISYCNGKIKGSAGFLSFLANNSASFNHSSYTYNNLNYSFLPYGGISFILANLRANLGFYFALTGQVIQS 240 SDLVWCGLTKRWISDESLELMEISSESQLEVSEQDAHILLEEHFLKIPEKYTLKNYEQVIHEHFKHNNLLTILKCLDQSR 320 NSSDQNIKKWADETYQKIITLPPLATHLTFEILNILRNYKMELLKKAQVNKRLWNEMIKNSYKVPTTKEQISMNELKYTI 400 DKELFIKSLNIETNTLLNFISCPDILNGITSYLVKDTNHAFSSTYLNNNIFQIKKDIIYYFLFYKNSYEYNIYDRPDISY 480 SSLSVLEKYNQHYNAEGNTSHDKLFFSKQFERWNDDYLQEELEDINKHFL 560 ..............................P................................................. 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 .................................................. 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PF3D7_1017200 4 ---MLFK|LK 0.055 . PF3D7_1017200 6 -MLFKLK|YL 0.067 . PF3D7_1017200 9 FKLKYLR|KH 0.082 . PF3D7_1017200 10 KLKYLRK|HN 0.085 . PF3D7_1017200 13 YLRKHNK|IY 0.085 . PF3D7_1017200 22 DMIQLSK|CK 0.056 . PF3D7_1017200 24 IQLSKCK|NG 0.061 . PF3D7_1017200 30 KNGYVIK|RS 0.057 . PF3D7_1017200 31 NGYVIKR|SV 0.514 *ProP* PF3D7_1017200 34 VIKRSVR|TS 0.196 . PF3D7_1017200 39 VRTSIFK|DD 0.075 . PF3D7_1017200 57 HNESLPK|IN 0.057 . PF3D7_1017200 65 NYLNSGK|LD 0.058 . PF3D7_1017200 73 DEYVYNR|NN 0.079 . PF3D7_1017200 86 TIIINSK|YM 0.065 . PF3D7_1017200 91 SKYMNIK|MI 0.072 . PF3D7_1017200 95 NIKMINK|LY 0.057 . PF3D7_1017200 98 MINKLYK|KL 0.094 . PF3D7_1017200 99 INKLYKK|LC 0.087 . PF3D7_1017200 109 SEVNYTK|RF 0.056 . PF3D7_1017200 110 EVNYTKR|FI 0.160 . PF3D7_1017200 133 NLYDLLK|IL 0.066 . PF3D7_1017200 140 ILELYQK|SK 0.073 . PF3D7_1017200 142 ELYQKSK|DI 0.075 . PF3D7_1017200 151 HYLNLFK|KI 0.058 . PF3D7_1017200 152 YLNLFKK|IL 0.101 . PF3D7_1017200 168 YLIFSYK|KP 0.060 . PF3D7_1017200 169 LIFSYKK|PI 0.091 . PF3D7_1017200 178 ISYCNGK|IK 0.076 . PF3D7_1017200 180 YCNGKIK|GS 0.074 . PF3D7_1017200 224 FILANLR|AN 0.067 . PF3D7_1017200 250 VWCGLTK|RW 0.061 . PF3D7_1017200 251 WCGLTKR|WI 0.188 . PF3D7_1017200 286 LEEHFLK|IP 0.061 . PF3D7_1017200 290 FLKIPEK|YT 0.077 . PF3D7_1017200 294 PEKYTLK|NY 0.071 . PF3D7_1017200 305 VIHEHFK|HN 0.065 . PF3D7_1017200 314 NLLTILK|CL 0.068 . PF3D7_1017200 320 KCLDQSR|NS 0.089 . PF3D7_1017200 328 SSDQNIK|KW 0.064 . PF3D7_1017200 329 SDQNIKK|WA 0.139 . PF3D7_1017200 337 ADETYQK|II 0.054 . PF3D7_1017200 357 EILNILR|NY 0.066 . PF3D7_1017200 360 NILRNYK|ME 0.083 . PF3D7_1017200 365 YKMELLK|KA 0.062 . PF3D7_1017200 366 KMELLKK|AQ 0.082 . PF3D7_1017200 371 KKAQVNK|RL 0.068 . PF3D7_1017200 372 KAQVNKR|LW 0.207 . PF3D7_1017200 379 LWNEMIK|NS 0.071 . PF3D7_1017200 383 MIKNSYK|VP 0.068 . PF3D7_1017200 388 YKVPTTK|EQ 0.061 . PF3D7_1017200 397 ISMNELK|YT 0.094 . PF3D7_1017200 402 LKYTIDK|EL 0.063 . PF3D7_1017200 407 DKELFIK|SL 0.086 . PF3D7_1017200 435 ITSYLVK|DT 0.096 . PF3D7_1017200 454 NNIFQIK|KD 0.062 . PF3D7_1017200 455 NIFQIKK|DI 0.108 . PF3D7_1017200 465 YYFLFYK|NS 0.057 . PF3D7_1017200 475 EYNIYDR|PD 0.071 . PF3D7_1017200 488 SLSVLEK|YN 0.077 . PF3D7_1017200 503 GNTSHDK|LF 0.063 . PF3D7_1017200 508 DKLFFSK|QF 0.068 . PF3D7_1017200 512 FSKQFER|WN 0.116 . PF3D7_1017200 527 ELEDINK|HF 0.057 . ____________________________^_________________

  • Fasta :-

    >PF3D7_1017200 ATGTTGTTTAAGTTAAAATATTTAAGGAAACATAACAAAATTTATGATATGATTCAACTT TCCAAATGTAAGAATGGATATGTAATAAAAAGGTCTGTAAGAACCAGTATTTTTAAAGAT GATGATATATATTTAAACCCACAAGATATACATAATGAATCCTTACCTAAAATAAATTAT TTAAATTCTGGAAAATTAGATGAATATGTATATAATCGTAATAATATAGGAATGGATACT ATTATAATTAATAGTAAATATATGAATATAAAAATGATTAATAAATTATATAAAAAATTA TGTGATAGTGAAGTTAATTATACTAAAAGGTTTATTTTTTTAACATCCTTATATAATAAT ATATTTAATTATAGTTATAATTTATATGATTTATTAAAAATTTTAGAATTATATCAAAAA AGTAAAGATATACATTATCTAAATTTATTCAAAAAAATTTTACAAAATACAAATGATTTA GCATATCTTATATTTTCTTATAAAAAACCAATTATATCATATTGTAACGGAAAAATAAAA GGATCTGCAGGATTCTTGTCTTTTCTAGCTAATAATAGTGCTTCATTCAATCATTCTTCA TATACATATAATAATTTAAATTATTCATTCTTACCTTATGGAGGAATATCTTTTATACTA GCTAATTTAAGAGCTAACTTAGGATTTTATTTCGCCTTAACAGGTCAGGTAATTCAATCA TCAGATTTGGTTTGGTGTGGATTAACTAAAAGATGGATATCTGATGAAAGTTTGGAATTA ATGGAGATAAGTTCTGAGAGTCAATTAGAAGTTTCAGAACAAGATGCACATATTTTATTA GAGGAGCATTTTTTAAAAATACCTGAAAAATATACCTTAAAAAATTATGAACAAGTCATA CATGAACATTTTAAACATAACAATTTGTTAACTATATTAAAATGTTTGGATCAATCAAGA AATAGTTCAGATCAAAACATAAAAAAATGGGCTGATGAAACGTATCAAAAAATTATTACC CTTCCACCATTAGCTACTCATTTGACATTTGAAATATTAAATATTTTAAGAAATTATAAA ATGGAATTATTAAAAAAAGCTCAAGTAAATAAACGTTTATGGAATGAAATGATAAAAAAT AGTTATAAAGTACCAACAACAAAAGAACAAATAAGTATGAATGAATTAAAATATACTATT GATAAAGAATTATTTATTAAATCATTAAATATTGAAACTAATACATTATTAAATTTTATA TCATGTCCTGATATTCTAAATGGTATAACATCCTATTTAGTAAAAGATACCAACCATGCC TTCTCATCAACATATTTAAATAATAATATATTTCAAATTAAAAAAGATATTATTTATTAT TTCCTCTTTTATAAAAATTCTTATGAATACAATATATATGACAGACCCGATATAAGTTAT TCAAGTTTGAGTGTTTTAGAAAAATATAATCAGCACTACAATGCTGAAGGTAATACAAGT CACGACAAACTTTTCTTTTCTAAGCAGTTTGAAAGGTGGAACGATGATTACCTCCAAGAA GAGCTGGAAGATATTAACAAACATTTTTTATAG
  • Download Fasta

  • Fasta :-

    MLFKLKYLRKHNKIYDMIQLSKCKNGYVIKRSVRTSIFKDDDIYLNPQDIHNESLPKINY LNSGKLDEYVYNRNNIGMDTIIINSKYMNIKMINKLYKKLCDSEVNYTKRFIFLTSLYNN IFNYSYNLYDLLKILELYQKSKDIHYLNLFKKILQNTNDLAYLIFSYKKPIISYCNGKIK GSAGFLSFLANNSASFNHSSYTYNNLNYSFLPYGGISFILANLRANLGFYFALTGQVIQS SDLVWCGLTKRWISDESLELMEISSESQLEVSEQDAHILLEEHFLKIPEKYTLKNYEQVI HEHFKHNNLLTILKCLDQSRNSSDQNIKKWADETYQKIITLPPLATHLTFEILNILRNYK MELLKKAQVNKRLWNEMIKNSYKVPTTKEQISMNELKYTIDKELFIKSLNIETNTLLNFI SCPDILNGITSYLVKDTNHAFSSTYLNNNIFQIKKDIIYYFLFYKNSYEYNIYDRPDISY SSLSVLEKYNQHYNAEGNTSHDKLFFSKQFERWNDDYLQEELEDINKHFL

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PF3D7_1017200392 SKEQISMNEL0.994unspPF3D7_1017200392 SKEQISMNEL0.994unspPF3D7_1017200392 SKEQISMNEL0.994unspPF3D7_101720036 SSVRTSIFKD0.995unspPF3D7_1017200254 SKRWISDESL0.996unsp

PF10_0167      PF10_0167:exon:2      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India