PF3D7_1019900 | autophagy-related protein 8

_IDPredictionOTHERSPmTPCS_Position
PF3D7_1019900OTHER0.9981200.0002760.001604
No Results

  • Fasta :-

    >PF3D7_1019900 MPSLKDEVSFENRVAETHKIRSKYPNRIPVVCERANRSNLPIIEKKKFLVPMNMLVGEFK FILHQHINQSAYGSNMKLFRERTIYLFVNNIVPKTGLLMQDLYEMYKDEDGYLYMEYSCE SCLG
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_1019900.fa Sequence name : PF3D7_1019900 Sequence length : 124 VALUES OF COMPUTED PARAMETERS Coef20 : 3.554 CoefTot : -0.132 ChDiff : 2 ZoneTo : 5 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.647 1.200 -0.118 0.527 MesoH : -1.050 0.067 -0.594 0.132 MuHd_075 : 24.995 18.574 7.146 3.826 MuHd_095 : 10.799 9.570 2.769 4.123 MuHd_100 : 18.389 14.536 3.905 5.364 MuHd_105 : 22.267 17.380 4.668 5.844 Hmax_075 : 3.617 9.217 -1.256 2.730 Hmax_095 : -10.800 1.200 -5.125 1.200 Hmax_100 : -5.600 3.800 -4.557 2.040 Hmax_105 : 3.150 6.767 -1.019 2.835 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8636 0.1364 DFMC : 0.8976 0.1024
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 124 PF3D7_1019900 MPSLKDEVSFENRVAETHKIRSKYPNRIPVVCERANRSNLPIIEKKKFLVPMNMLVGEFKFILHQHINQSAYGSNMKLFR 80 ERTIYLFVNNIVPKTGLLMQDLYEMYKDEDGYLYMEYSCESCLG 160 ................................................................................ 80 ............................................ 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_1019900 5 --MPSLK|DE 0.064 . PF3D7_1019900 13 EVSFENR|VA 0.113 . PF3D7_1019900 19 RVAETHK|IR 0.068 . PF3D7_1019900 21 AETHKIR|SK 0.132 . PF3D7_1019900 23 THKIRSK|YP 0.069 . PF3D7_1019900 27 RSKYPNR|IP 0.085 . PF3D7_1019900 34 IPVVCER|AN 0.102 . PF3D7_1019900 37 VCERANR|SN 0.284 . PF3D7_1019900 45 NLPIIEK|KK 0.059 . PF3D7_1019900 46 LPIIEKK|KF 0.093 . PF3D7_1019900 47 PIIEKKK|FL 0.113 . PF3D7_1019900 60 MLVGEFK|FI 0.072 . PF3D7_1019900 77 AYGSNMK|LF 0.055 . PF3D7_1019900 80 SNMKLFR|ER 0.102 . PF3D7_1019900 82 MKLFRER|TI 0.089 . PF3D7_1019900 94 VNNIVPK|TG 0.064 . PF3D7_1019900 107 DLYEMYK|DE 0.073 . ____________________________^_________________

  • Fasta :-

    >PF3D7_1019900 ATGCCATCGCTTAAAGACGAAGTATCTTTCGAAAACAGAGTTGCAGAGACTCATAAAATT CGTTCCAAATATCCTAATCGTATACCTGTAGTATGTGAGAGAGCTAACAGATCTAATTTA CCCATAATAGAAAAGAAGAAATTCCTTGTACCTATGAATATGTTAGTTGGTGAATTTAAA TTTATATTACATCAACATATTAATCAAAGTGCATATGGAAGTAACATGAAATTATTTCGA GAACGTACCATATATTTATTTGTAAATAATATAGTTCCTAAAACAGGATTGTTAATGCAA GATTTGTATGAAATGTATAAAGATGAAGATGGATATTTATATATGGAATATAGTTGTGAG AGTTGTCTAGGATAA
  • Download Fasta

  • Fasta :-

    MPSLKDEVSFENRVAETHKIRSKYPNRIPVVCERANRSNLPIIEKKKFLVPMNMLVGEFK FILHQHINQSAYGSNMKLFRERTIYLFVNNIVPKTGLLMQDLYEMYKDEDGYLYMEYSCE SCLG

No Results
No Results
No Results

PF10_0193      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India