PF3D7_1030600 | tRNA N6-adenosine threonylcarbamoyltransferase

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0000408      GO:0005737      

  • Curated_GO_Components:  EKC/KEOPS complex      cytoplasm      

  • Curated_GO_Function_IDs:  GO:0005515      

  • Curated_GO_Functions:  protein binding      

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PF3D7_1030600OTHER0.9999330.0000320.000035
No Results

  • Fasta :-

    >PF3D7_1030600 MFDNMEVDKKNGKKKYILGIEGSANKLGISIINEDMNILVNMRRTYISEIGCGFIPREIS AHHKYYIIDMIKSCLKKVNIKISDITLICYTKGPGIGSALYIGYNIAKILYSYFNIPVVG VNHCIAHIEMGIFITKLYNPIVLYVSGSNTQIIYYNDHKKKYEIIGETLDIAIGNVIDRS ARILKISNAPSPGYNVELLARKKYLLNIMKRNNNKNKNNITKEQEMKDNDFNPNELNDEQ INDNKKMEDFTELLFFPYTIKGMDISFSGYDFYITKYFSKYMNKKSKTLNKLEKQTTNQG CNEKRKDNQYDNKIKCNQKKQQQEKEKDTYSNINKKCKIENVSQQTIESNQNNNNMYNQN KLGKETFKNIEPLKDNYKNDYVKVKEDIRDNHNGTVQNINDDNNSSNNYQKSNKLFYVAG LKGNSYYEDNIIFESEHKENYGENDEYIDDNCSIETASDFYEKSVNEEGEGEGEEDVIDL TEEEKRKIQICYSLQHHIFSMLIEITERAIAFTNSKEVIIVGGVGCNLFLQNMMKKMAKQ KNIKIGFMDHSYCVDNGAMIAYTGYLEYLHAKNKDIYNFNNITIHQRYRTDDVFVTWK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_1030600.fa Sequence name : PF3D7_1030600 Sequence length : 598 VALUES OF COMPUTED PARAMETERS Coef20 : 3.028 CoefTot : 0.000 ChDiff : 1 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.259 1.565 0.150 0.605 MesoH : 0.347 0.820 -0.098 0.427 MuHd_075 : 26.609 15.883 8.773 7.156 MuHd_095 : 17.139 6.764 3.743 2.239 MuHd_100 : 17.263 1.340 3.503 1.879 MuHd_105 : 17.815 6.145 3.375 2.305 Hmax_075 : 0.088 4.112 -2.101 3.115 Hmax_095 : -3.237 1.400 -3.980 1.417 Hmax_100 : -6.800 -2.300 -4.826 0.820 Hmax_105 : -6.500 3.500 -4.521 1.180 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9543 0.0457 DFMC : 0.9487 0.0513
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 598 PF3D7_1030600 MFDNMEVDKKNGKKKYILGIEGSANKLGISIINEDMNILVNMRRTYISEIGCGFIPREISAHHKYYIIDMIKSCLKKVNI 80 KISDITLICYTKGPGIGSALYIGYNIAKILYSYFNIPVVGVNHCIAHIEMGIFITKLYNPIVLYVSGSNTQIIYYNDHKK 160 KYEIIGETLDIAIGNVIDRSARILKISNAPSPGYNVELLARKKYLLNIMKRNNNKNKNNITKEQEMKDNDFNPNELNDEQ 240 INDNKKMEDFTELLFFPYTIKGMDISFSGYDFYITKYFSKYMNKKSKTLNKLEKQTTNQGCNEKRKDNQYDNKIKCNQKK 320 QQQEKEKDTYSNINKKCKIENVSQQTIESNQNNNNMYNQNKLGKETFKNIEPLKDNYKNDYVKVKEDIRDNHNGTVQNIN 400 DDNNSSNNYQKSNKLFYVAGLKGNSYYEDNIIFESEHKENYGENDEYIDDNCSIETASDFYEKSVNEEGEGEGEEDVIDL 480 TEEEKRKIQICYSLQHHIFSMLIEITERAIAFTNSKEVIIVGGVGCNLFLQNMMKKMAKQKNIKIGFMDHSYCVDNGAMI 560 AYTGYLEYLHAKNKDIYNFNNITIHQRYRTDDVFVTWK 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ...................................... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_1030600 9 DNMEVDK|KN 0.074 . PF3D7_1030600 10 NMEVDKK|NG 0.080 . PF3D7_1030600 13 VDKKNGK|KK 0.061 . PF3D7_1030600 14 DKKNGKK|KY 0.105 . PF3D7_1030600 15 KKNGKKK|YI 0.291 . PF3D7_1030600 26 IEGSANK|LG 0.055 . PF3D7_1030600 43 NILVNMR|RT 0.082 . PF3D7_1030600 44 ILVNMRR|TY 0.124 . PF3D7_1030600 57 GCGFIPR|EI 0.121 . PF3D7_1030600 64 EISAHHK|YY 0.076 . PF3D7_1030600 72 YIIDMIK|SC 0.069 . PF3D7_1030600 76 MIKSCLK|KV 0.071 . PF3D7_1030600 77 IKSCLKK|VN 0.115 . PF3D7_1030600 81 LKKVNIK|IS 0.066 . PF3D7_1030600 92 TLICYTK|GP 0.067 . PF3D7_1030600 108 IGYNIAK|IL 0.068 . PF3D7_1030600 136 MGIFITK|LY 0.064 . PF3D7_1030600 159 IYYNDHK|KK 0.062 . PF3D7_1030600 160 YYNDHKK|KY 0.154 . PF3D7_1030600 161 YNDHKKK|YE 0.156 . PF3D7_1030600 179 IGNVIDR|SA 0.169 . PF3D7_1030600 182 VIDRSAR|IL 0.246 . PF3D7_1030600 185 RSARILK|IS 0.118 . PF3D7_1030600 201 NVELLAR|KK 0.070 . PF3D7_1030600 202 VELLARK|KY 0.060 . PF3D7_1030600 203 ELLARKK|YL 0.087 . PF3D7_1030600 210 YLLNIMK|RN 0.058 . PF3D7_1030600 211 LLNIMKR|NN 0.185 . PF3D7_1030600 215 MKRNNNK|NK 0.069 . PF3D7_1030600 217 RNNNKNK|NN 0.102 . PF3D7_1030600 222 NKNNITK|EQ 0.079 . PF3D7_1030600 227 TKEQEMK|DN 0.081 . PF3D7_1030600 245 EQINDNK|KM 0.062 . PF3D7_1030600 246 QINDNKK|ME 0.097 . PF3D7_1030600 261 FFPYTIK|GM 0.063 . PF3D7_1030600 276 YDFYITK|YF 0.070 . PF3D7_1030600 280 ITKYFSK|YM 0.070 . PF3D7_1030600 284 FSKYMNK|KS 0.059 . PF3D7_1030600 285 SKYMNKK|SK 0.129 . PF3D7_1030600 287 YMNKKSK|TL 0.094 . PF3D7_1030600 291 KSKTLNK|LE 0.066 . PF3D7_1030600 294 TLNKLEK|QT 0.088 . PF3D7_1030600 304 NQGCNEK|RK 0.061 . PF3D7_1030600 305 QGCNEKR|KD 0.157 . PF3D7_1030600 306 GCNEKRK|DN 0.108 . PF3D7_1030600 313 DNQYDNK|IK 0.070 . PF3D7_1030600 315 QYDNKIK|CN 0.072 . PF3D7_1030600 319 KIKCNQK|KQ 0.060 . PF3D7_1030600 320 IKCNQKK|QQ 0.154 . PF3D7_1030600 325 KKQQQEK|EK 0.072 . PF3D7_1030600 327 QQQEKEK|DT 0.087 . PF3D7_1030600 335 TYSNINK|KC 0.067 . PF3D7_1030600 336 YSNINKK|CK 0.112 . PF3D7_1030600 338 NINKKCK|IE 0.080 . PF3D7_1030600 361 NMYNQNK|LG 0.061 . PF3D7_1030600 364 NQNKLGK|ET 0.074 . PF3D7_1030600 368 LGKETFK|NI 0.073 . PF3D7_1030600 374 KNIEPLK|DN 0.070 . PF3D7_1030600 378 PLKDNYK|ND 0.059 . PF3D7_1030600 383 YKNDYVK|VK 0.078 . PF3D7_1030600 385 NDYVKVK|ED 0.070 . PF3D7_1030600 389 KVKEDIR|DN 0.102 . PF3D7_1030600 411 SSNNYQK|SN 0.082 . PF3D7_1030600 414 NYQKSNK|LF 0.064 . PF3D7_1030600 422 FYVAGLK|GN 0.062 . PF3D7_1030600 438 IFESEHK|EN 0.059 . PF3D7_1030600 463 ASDFYEK|SV 0.123 . PF3D7_1030600 485 DLTEEEK|RK 0.056 . PF3D7_1030600 486 LTEEEKR|KI 0.135 . PF3D7_1030600 487 TEEEKRK|IQ 0.077 . PF3D7_1030600 508 LIEITER|AI 0.074 . PF3D7_1030600 516 IAFTNSK|EV 0.077 . PF3D7_1030600 535 FLQNMMK|KM 0.066 . PF3D7_1030600 536 LQNMMKK|MA 0.143 . PF3D7_1030600 539 MMKKMAK|QK 0.079 . PF3D7_1030600 541 KKMAKQK|NI 0.096 . PF3D7_1030600 544 AKQKNIK|IG 0.059 . PF3D7_1030600 572 LEYLHAK|NK 0.068 . PF3D7_1030600 574 YLHAKNK|DI 0.080 . PF3D7_1030600 587 NITIHQR|YR 0.086 . PF3D7_1030600 589 TIHQRYR|TD 0.105 . PF3D7_1030600 598 DVFVTWK|-- 0.062 . ____________________________^_________________

  • Fasta :-

    >PF3D7_1030600 ATGTTTGACAATATGGAAGTTGATAAAAAGAATGGGAAGAAGAAATATATTTTAGGCATA GAAGGAAGCGCCAATAAATTAGGCATAAGTATTATAAATGAAGATATGAATATTTTAGTA AATATGAGAAGGACATATATATCTGAAATAGGTTGTGGATTTATACCTAGAGAAATTAGT GCTCATCATAAATATTATATTATTGATATGATAAAGAGTTGTTTAAAAAAAGTAAATATA AAAATAAGTGATATTACATTAATATGTTACACGAAAGGTCCCGGTATCGGATCAGCTCTC TATATAGGTTATAATATAGCAAAAATATTATATTCTTATTTTAATATACCAGTGGTTGGT GTTAATCATTGTATTGCTCATATCGAAATGGGGATATTTATAACAAAATTATATAATCCT ATAGTACTTTATGTCAGTGGAAGTAATACACAAATTATATATTATAATGATCATAAAAAG AAATATGAAATAATAGGAGAAACTTTAGATATTGCTATAGGAAATGTTATAGATCGCTCA GCAAGAATTTTAAAAATATCTAATGCACCCTCACCAGGATATAATGTAGAGCTGTTAGCT AGAAAAAAATATCTACTAAATATTATGAAAAGAAATAATAATAAAAATAAAAATAATATC ACGAAGGAACAAGAAATGAAAGATAATGACTTTAACCCAAATGAATTAAATGATGAACAA ATAAATGATAATAAAAAAATGGAAGACTTTACAGAATTATTATTCTTTCCTTATACTATC AAAGGGATGGATATATCTTTTAGTGGGTACGATTTTTATATCACCAAATATTTTTCCAAA TATATGAATAAGAAGTCAAAAACATTAAATAAGTTGGAAAAACAAACAACCAATCAAGGA TGCAATGAAAAACGAAAGGATAACCAATATGATAATAAAATAAAATGTAATCAAAAGAAA CAACAACAAGAAAAAGAAAAAGATACATATAGTAATATAAATAAAAAATGTAAAATAGAA AATGTGAGTCAACAAACAATTGAATCTAATCAAAATAACAATAATATGTATAATCAAAAT AAACTAGGAAAAGAAACGTTTAAGAATATTGAACCTTTGAAGGATAACTATAAAAATGAT TATGTTAAGGTCAAAGAAGATATTAGAGATAATCATAACGGTACCGTTCAAAATATAAAT GATGATAATAATAGTAGTAATAACTATCAAAAAAGTAATAAATTATTTTATGTTGCTGGT CTTAAAGGTAATTCCTATTATGAAGATAATATAATTTTTGAAAGTGAACATAAAGAAAAT TACGGAGAGAATGATGAATATATTGATGATAATTGTTCTATTGAGACTGCTAGTGATTTT TATGAAAAAAGTGTAAATGAAGAAGGAGAAGGAGAAGGAGAAGAAGATGTAATTGATCTG ACAGAAGAAGAAAAAAGAAAAATACAAATATGCTATAGCCTACAACATCATATTTTTAGT ATGCTTATTGAAATTACGGAAAGAGCTATAGCATTTACAAATAGTAAAGAGGTTATTATT GTAGGAGGTGTTGGATGTAATTTATTTCTTCAAAATATGATGAAAAAAATGGCGAAACAA AAAAATATTAAAATTGGATTTATGGATCACAGTTATTGTGTTGATAATGGAGCCATGATT GCATATACCGGATATTTAGAATATCTACATGCAAAAAATAAAGATATATATAATTTTAAC AATATAACTATTCATCAGAGATATAGAACTGATGATGTTTTCGTAACATGGAAATAA
  • Download Fasta

  • Fasta :-

    MFDNMEVDKKNGKKKYILGIEGSANKLGISIINEDMNILVNMRRTYISEIGCGFIPREIS AHHKYYIIDMIKSCLKKVNIKISDITLICYTKGPGIGSALYIGYNIAKILYSYFNIPVVG VNHCIAHIEMGIFITKLYNPIVLYVSGSNTQIIYYNDHKKKYEIIGETLDIAIGNVIDRS ARILKISNAPSPGYNVELLARKKYLLNIMKRNNNKNKNNITKEQEMKDNDFNPNELNDEQ INDNKKMEDFTELLFFPYTIKGMDISFSGYDFYITKYFSKYMNKKSKTLNKLEKQTTNQG CNEKRKDNQYDNKIKCNQKKQQQEKEKDTYSNINKKCKIENVSQQTIESNQNNNNMYNQN KLGKETFKNIEPLKDNYKNDYVKVKEDIRDNHNGTVQNINDDNNSSNNYQKSNKLFYVAG LKGNSYYEDNIIFESEHKENYGENDEYIDDNCSIETASDFYEKSVNEEGEGEGEEDVIDL TEEEKRKIQICYSLQHHIFSMLIEITERAIAFTNSKEVIIVGGVGCNLFLQNMMKKMAKQ KNIKIGFMDHSYCVDNGAMIAYTGYLEYLHAKNKDIYNFNNITIHQRYRTDDVFVTWK

No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PF3D7_1030600330 YEKDTYSNIN0.991unspPF3D7_1030600447 YENDEYIDDN0.991unsp

PF10_0299      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India