PF3D7_1116200 | pyridoxine biosynthesis protein PDX2

Computed_GO_Component_IDs:
Computed_GO_Components:
Computed_GO_Function_IDs: GO:0004359
Computed_GO_Functions: glutaminase activity
Computed_GO_Process_IDs: GO:0042823 GO:0042819
Computed_GO_Processes: pyridoxal phosphate biosynthetic process vitamin B6 biosynthetic process
Curated_GO_Component_IDs: GO:0005829
Curated_GO_Components: cytosol
Curated_GO_Function_IDs: GO:0004359
Curated_GO_Functions: glutaminase activity
Curated_GO_Processes: response to singlet oxygen vitamin B6 biosynthetic process

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	PF3D7_1116200	OTHER	0.998698	0.001272	0.000030

No Results

Fasta :-
>PF3D7_1116200 MSEITIGVLSLQGDFEPHINHFIKLQIPSLNIIQVRNVHDLGLCDGLVIPGGESTTVRRC CAYENDTLYNALVHFIHVLKKPIWGTCAGCILLSKNVENIKLYSNFGNKFSFGGLDITIC RNFYGSQNDSFICSLNIISDSSAFKKDLTAACIRAPYIREILSDEVKVLATFSHESYGPN IIAAVEQNNCLGTVFHPELLPHTAFQQYFYEKVKNYKYS
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MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_1116200.fa Sequence name : PF3D7_1116200 Sequence length : 219 VALUES OF COMPUTED PARAMETERS Coef20 : 3.242 CoefTot : 0.112 ChDiff : -2 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.629 1.106 0.073 0.430 MesoH : -0.410 0.416 -0.290 0.229 MuHd_075 : 15.911 11.925 4.686 2.197 MuHd_095 : 12.160 10.589 3.136 2.256 MuHd_100 : 15.558 12.456 3.028 2.806 MuHd_105 : 16.377 11.225 2.156 2.716 Hmax_075 : 17.267 13.417 2.281 4.795 Hmax_095 : 10.937 10.200 0.978 4.140 Hmax_100 : 13.600 13.600 0.981 5.520 Hmax_105 : 10.200 8.837 -0.109 4.043 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9727 0.0273 DFMC : 0.9723 0.0277

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 219 PF3D7_1116200 MSEITIGVLSLQGDFEPHINHFIKLQIPSLNIIQVRNVHDLGLCDGLVIPGGESTTVRRCCAYENDTLYNALVHFIHVLK 80 KPIWGTCAGCILLSKNVENIKLYSNFGNKFSFGGLDITICRNFYGSQNDSFICSLNIISDSSAFKKDLTAACIRAPYIRE 160 ILSDEVKVLATFSHESYGPNIIAAVEQNNCLGTVFHPELLPHTAFQQYFYEKVKNYKYS 240 ................................................................................ 80 ................................................................................ 160 ........................................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_1116200 24 HINHFIK|LQ 0.085 . PF3D7_1116200 36 LNIIQVR|NV 0.169 . PF3D7_1116200 58 GESTTVR|RC 0.132 . PF3D7_1116200 59 ESTTVRR|CC 0.130 . PF3D7_1116200 80 HFIHVLK|KP 0.061 . PF3D7_1116200 81 FIHVLKK|PI 0.110 . PF3D7_1116200 95 GCILLSK|NV 0.070 . PF3D7_1116200 101 KNVENIK|LY 0.063 . PF3D7_1116200 109 YSNFGNK|FS 0.082 . PF3D7_1116200 121 LDITICR|NF 0.087 . PF3D7_1116200 145 SDSSAFK|KD 0.064 . PF3D7_1116200 146 DSSAFKK|DL 0.202 . PF3D7_1116200 154 LTAACIR|AP 0.081 . PF3D7_1116200 159 IRAPYIR|EI 0.104 . PF3D7_1116200 167 ILSDEVK|VL 0.064 . PF3D7_1116200 212 QQYFYEK|VK 0.059 . PF3D7_1116200 214 YFYEKVK|NY 0.061 . PF3D7_1116200 217 EKVKNYK|YS 0.072 . ____________________________^_________________

Fasta :-
>PF3D7_1116200 ATGTCAGAAATAACTATAGGGGTATTATCACTACAAGGTGATTTTGAACCGCATATAAAT CATTTTATCAAATTACAAATACCGTCGTTAAATATTATCCAAGTAAGAAATGTTCATGAT TTGGGACTATGTGACGGGCTTGTAATTCCAGGTGGAGAATCCACAACTGTACGTCGATGT TGTGCTTATGAAAATGATACCTTATATAATGCTTTAGTACATTTCATTCATGTGCTAAAA AAGCCAATTTGGGGCACTTGTGCAGGTTGTATTCTCTTATCTAAGAATGTAGAAAATATA AAACTTTATAGCAATTTTGGAAATAAATTTTCTTTTGGAGGATTGGATATAACTATATGT AGAAATTTTTATGGATCACAAAATGATAGTTTTATATGCTCATTAAACATAATATCTGAT AGTAGTGCTTTTAAGAAAGACTTAACAGCGGCCTGCATAAGGGCACCTTATATAAGAGAA ATATTATCAGATGAAGTAAAAGTACTTGCTACATTTTCACATGAATCATATGGCCCAAAT ATTATAGCAGCCGTTGAACAGAATAATTGTTTAGGCACAGTTTTCCATCCAGAATTATTG CCACATACCGCTTTTCAACAATATTTTTATGAGAAGGTTAAAAATTACAAATATTCATAA
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Fasta :-

MSEITIGVLSLQGDFEPHINHFIKLQIPSLNIIQVRNVHDLGLCDGLVIPGGESTTVRRC CAYENDTLYNALVHFIHVLKKPIWGTCAGCILLSKNVENIKLYSNFGNKFSFGGLDITIC RNFYGSQNDSFICSLNIISDSSAFKKDLTAACIRAPYIREILSDEVKVLATFSHESYGPN IIAAVEQNNCLGTVFHPELLPHTAFQQYFYEKVKNYKYS