_IDPredictionOTHERSPmTPCS_Position
PF3D7_1126600OTHER0.9984870.0004350.001078
No Results
  • Fasta :-

    >PF3D7_1126600 MPKPPFSNITQKLGNLLNICKDMCRKGYNCYYIKEKENDKGSQEDVRCHIKNKINIKRNE EKAEKGETLDQMEKLLLDLTQGKYKAEKHYVYTIDGYRLNLYRIVNNNSENIINDKVVQK ERINEQVFEEDKKEVFCLNHGLFESSINYTCKGYNSLTFQIFSNNHDVWISNNRGNNFTQ YVGKNIAINKLRENYTEEDLRDLGLNIKSDQIEKEMRKKKKKKRKKKDNNINQCDNKNMY HFKILHNLFFQTIKYIYPKKNNFTYYMKNFLMRKYLCNYHMNRSNKNCFNHYDRENIDLH KKKKIIIIKKKNNNNNNNNNNNNNNSHLIFRPLADNNFFNIFVRNINEKKKGNIYFKATQ EREDANIKRGGTLGCDKIKEKESSEYFVDNKKLKNKSSNLTDNCDNKINKYDYNDDDNDD KDDDDDNDDNDNDNDDNDDDDNEYTFEDMSTKDLPCIIKYIKNKTKKDKIIYVGFSQGSI QLLISSCLNEYVRKSIKRCYLMSLPIILRNKYNLEIPMKFLLYISKYYSFVFKGKSFFQH MIPYHISTFIISNLAHIIAHHVFKYYNENIKPEEKKLFFYHTPNGSTSKANLTRWAKAFN TCPVTNVLEKYPHECAFPITLIYGNKDTIIHVDKSIKYMNKIFDRKILKIITVPNWAHLD PLWSDNDGIVISCILKDINRGD
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_1126600.fa Sequence name : PF3D7_1126600 Sequence length : 682 VALUES OF COMPUTED PARAMETERS Coef20 : 3.435 CoefTot : -1.427 ChDiff : 25 ZoneTo : 21 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.165 1.265 0.173 0.571 MesoH : -0.265 0.446 -0.364 0.272 MuHd_075 : 19.959 7.325 7.133 4.267 MuHd_095 : 31.730 27.104 10.421 8.310 MuHd_100 : 28.588 29.191 10.867 7.195 MuHd_105 : 37.784 34.258 13.899 8.639 Hmax_075 : 6.000 5.700 1.386 2.860 Hmax_095 : 15.925 15.225 4.622 5.933 Hmax_100 : 18.400 20.500 4.990 6.140 Hmax_105 : 20.417 25.550 6.325 7.572 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.1342 0.8658 DFMC : 0.3699 0.6301 This protein is probably imported in mitochondria. f(Ser) = 0.0476 f(Arg) = 0.0000 CMi = 0.68027 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 682 PF3D7_1126600 MPKPPFSNITQKLGNLLNICKDMCRKGYNCYYIKEKENDKGSQEDVRCHIKNKINIKRNEEKAEKGETLDQMEKLLLDLT 80 QGKYKAEKHYVYTIDGYRLNLYRIVNNNSENIINDKVVQKERINEQVFEEDKKEVFCLNHGLFESSINYTCKGYNSLTFQ 160 IFSNNHDVWISNNRGNNFTQYVGKNIAINKLRENYTEEDLRDLGLNIKSDQIEKEMRKKKKKKRKKKDNNINQCDNKNMY 240 HFKILHNLFFQTIKYIYPKKNNFTYYMKNFLMRKYLCNYHMNRSNKNCFNHYDRENIDLHKKKKIIIIKKKNNNNNNNNN 320 NNNNNSHLIFRPLADNNFFNIFVRNINEKKKGNIYFKATQEREDANIKRGGTLGCDKIKEKESSEYFVDNKKLKNKSSNL 400 TDNCDNKINKYDYNDDDNDDKDDDDDNDDNDNDNDDNDDDDNEYTFEDMSTKDLPCIIKYIKNKTKKDKIIYVGFSQGSI 480 QLLISSCLNEYVRKSIKRCYLMSLPIILRNKYNLEIPMKFLLYISKYYSFVFKGKSFFQHMIPYHISTFIISNLAHIIAH 560 HVFKYYNENIKPEEKKLFFYHTPNGSTSKANLTRWAKAFNTCPVTNVLEKYPHECAFPITLIYGNKDTIIHVDKSIKYMN 640 KIFDRKILKIITVPNWAHLDPLWSDNDGIVISCILKDINRGD 720 ................................................................................ 80 ................................................................................ 160 ..................................................................P............. 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 .......................................... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PF3D7_1126600 3 ----MPK|PP 0.066 . PF3D7_1126600 12 FSNITQK|LG 0.060 . PF3D7_1126600 21 NLLNICK|DM 0.064 . PF3D7_1126600 25 ICKDMCR|KG 0.071 . PF3D7_1126600 26 CKDMCRK|GY 0.072 . PF3D7_1126600 34 YNCYYIK|EK 0.061 . PF3D7_1126600 36 CYYIKEK|EN 0.066 . PF3D7_1126600 40 KEKENDK|GS 0.061 . PF3D7_1126600 47 GSQEDVR|CH 0.086 . PF3D7_1126600 51 DVRCHIK|NK 0.063 . PF3D7_1126600 53 RCHIKNK|IN 0.069 . PF3D7_1126600 57 KNKINIK|RN 0.064 . PF3D7_1126600 58 NKINIKR|NE 0.280 . PF3D7_1126600 62 IKRNEEK|AE 0.068 . PF3D7_1126600 65 NEEKAEK|GE 0.056 . PF3D7_1126600 74 TLDQMEK|LL 0.056 . PF3D7_1126600 83 LDLTQGK|YK 0.060 . PF3D7_1126600 85 LTQGKYK|AE 0.068 . PF3D7_1126600 88 GKYKAEK|HY 0.067 . PF3D7_1126600 98 YTIDGYR|LN 0.060 . PF3D7_1126600 103 YRLNLYR|IV 0.099 . PF3D7_1126600 116 ENIINDK|VV 0.072 . PF3D7_1126600 120 NDKVVQK|ER 0.066 . PF3D7_1126600 122 KVVQKER|IN 0.118 . PF3D7_1126600 132 QVFEEDK|KE 0.055 . PF3D7_1126600 133 VFEEDKK|EV 0.111 . PF3D7_1126600 152 SINYTCK|GY 0.084 . PF3D7_1126600 174 VWISNNR|GN 0.078 . PF3D7_1126600 184 FTQYVGK|NI 0.067 . PF3D7_1126600 190 KNIAINK|LR 0.059 . PF3D7_1126600 192 IAINKLR|EN 0.108 . PF3D7_1126600 201 YTEEDLR|DL 0.101 . PF3D7_1126600 208 DLGLNIK|SD 0.071 . PF3D7_1126600 214 KSDQIEK|EM 0.057 . PF3D7_1126600 217 QIEKEMR|KK 0.082 . PF3D7_1126600 218 IEKEMRK|KK 0.075 . PF3D7_1126600 219 EKEMRKK|KK 0.080 . PF3D7_1126600 220 KEMRKKK|KK 0.357 . PF3D7_1126600 221 EMRKKKK|KK 0.150 . PF3D7_1126600 222 MRKKKKK|KR 0.143 . PF3D7_1126600 223 RKKKKKK|RK 0.120 . PF3D7_1126600 224 KKKKKKR|KK 0.260 . PF3D7_1126600 225 KKKKKRK|KK 0.144 . PF3D7_1126600 226 KKKKRKK|KD 0.110 . PF3D7_1126600 227 KKKRKKK|DN 0.598 *ProP* PF3D7_1126600 237 INQCDNK|NM 0.060 . PF3D7_1126600 243 KNMYHFK|IL 0.088 . PF3D7_1126600 254 LFFQTIK|YI 0.076 . PF3D7_1126600 259 IKYIYPK|KN 0.063 . PF3D7_1126600 260 KYIYPKK|NN 0.095 . PF3D7_1126600 268 NFTYYMK|NF 0.051 . PF3D7_1126600 273 MKNFLMR|KY 0.113 . PF3D7_1126600 274 KNFLMRK|YL 0.086 . PF3D7_1126600 283 CNYHMNR|SN 0.134 . PF3D7_1126600 286 HMNRSNK|NC 0.173 . PF3D7_1126600 294 CFNHYDR|EN 0.082 . PF3D7_1126600 301 ENIDLHK|KK 0.058 . PF3D7_1126600 302 NIDLHKK|KK 0.085 . PF3D7_1126600 303 IDLHKKK|KI 0.122 . PF3D7_1126600 304 DLHKKKK|II 0.142 . PF3D7_1126600 309 KKIIIIK|KK 0.062 . PF3D7_1126600 310 KIIIIKK|KN 0.085 . PF3D7_1126600 311 IIIIKKK|NN 0.101 . PF3D7_1126600 331 NSHLIFR|PL 0.097 . PF3D7_1126600 344 FFNIFVR|NI 0.099 . PF3D7_1126600 349 VRNINEK|KK 0.076 . PF3D7_1126600 350 RNINEKK|KG 0.093 . PF3D7_1126600 351 NINEKKK|GN 0.121 . PF3D7_1126600 357 KGNIYFK|AT 0.079 . PF3D7_1126600 362 FKATQER|ED 0.093 . PF3D7_1126600 368 REDANIK|RG 0.060 . PF3D7_1126600 369 EDANIKR|GG 0.170 . PF3D7_1126600 377 GTLGCDK|IK 0.057 . PF3D7_1126600 379 LGCDKIK|EK 0.073 . PF3D7_1126600 381 CDKIKEK|ES 0.069 . PF3D7_1126600 391 EYFVDNK|KL 0.056 . PF3D7_1126600 392 YFVDNKK|LK 0.070 . PF3D7_1126600 394 VDNKKLK|NK 0.077 . PF3D7_1126600 396 NKKLKNK|SS 0.077 . PF3D7_1126600 407 TDNCDNK|IN 0.062 . PF3D7_1126600 410 CDNKINK|YD 0.065 . PF3D7_1126600 421 DDDNDDK|DD 0.065 . PF3D7_1126600 452 FEDMSTK|DL 0.072 . PF3D7_1126600 459 DLPCIIK|YI 0.061 . PF3D7_1126600 462 CIIKYIK|NK 0.059 . PF3D7_1126600 464 IKYIKNK|TK 0.074 . PF3D7_1126600 466 YIKNKTK|KD 0.070 . PF3D7_1126600 467 IKNKTKK|DK 0.178 . PF3D7_1126600 469 NKTKKDK|II 0.092 . PF3D7_1126600 493 CLNEYVR|KS 0.072 . PF3D7_1126600 494 LNEYVRK|SI 0.129 . PF3D7_1126600 497 YVRKSIK|RC 0.055 . PF3D7_1126600 498 VRKSIKR|CY 0.222 . PF3D7_1126600 509 SLPIILR|NK 0.072 . PF3D7_1126600 511 PIILRNK|YN 0.064 . PF3D7_1126600 519 NLEIPMK|FL 0.065 . PF3D7_1126600 526 FLLYISK|YY 0.072 . PF3D7_1126600 533 YYSFVFK|GK 0.094 . PF3D7_1126600 535 SFVFKGK|SF 0.094 . PF3D7_1126600 564 IAHHVFK|YY 0.088 . PF3D7_1126600 571 YYNENIK|PE 0.068 . PF3D7_1126600 575 NIKPEEK|KL 0.056 . PF3D7_1126600 576 IKPEEKK|LF 0.102 . PF3D7_1126600 589 PNGSTSK|AN 0.058 . PF3D7_1126600 594 SKANLTR|WA 0.134 . PF3D7_1126600 597 NLTRWAK|AF 0.122 . PF3D7_1126600 610 VTNVLEK|YP 0.065 . PF3D7_1126600 626 TLIYGNK|DT 0.075 . PF3D7_1126600 634 TIIHVDK|SI 0.097 . PF3D7_1126600 637 HVDKSIK|YM 0.070 . PF3D7_1126600 641 SIKYMNK|IF 0.067 . PF3D7_1126600 645 MNKIFDR|KI 0.109 . PF3D7_1126600 646 NKIFDRK|IL 0.076 . PF3D7_1126600 649 FDRKILK|II 0.060 . PF3D7_1126600 676 VISCILK|DI 0.075 . PF3D7_1126600 680 ILKDINR|GD 0.085 . ____________________________^_________________
  • Fasta :-

    >PF3D7_1126600 ATGCCCAAACCGCCCTTCAGCAATATTACACAAAAGTTAGGGAATTTATTGAATATTTGT AAAGATATGTGCAGGAAGGGTTATAATTGTTACTATATAAAAGAAAAAGAAAATGACAAA GGTTCACAAGAAGATGTAAGATGTCATATAAAAAACAAGATAAACATAAAAAGAAATGAA GAGAAAGCGGAAAAAGGAGAAACACTTGATCAAATGGAAAAATTATTACTTGATTTAACA CAAGGGAAATATAAAGCAGAAAAACATTATGTGTATACAATTGATGGATATAGATTAAAT TTATATAGAATTGTAAATAATAATAGTGAAAATATAATAAATGATAAAGTTGTTCAAAAG GAAAGGATAAATGAACAAGTATTTGAAGAAGATAAGAAAGAAGTTTTTTGTTTAAATCAT GGGTTGTTTGAATCGTCTATTAATTATACATGTAAAGGTTATAATTCTTTAACTTTCCAA ATCTTCTCAAATAATCATGATGTATGGATAAGTAACAACAGAGGGAATAATTTCACACAG TACGTTGGGAAAAATATAGCTATAAATAAATTAAGGGAAAACTACACAGAGGAAGATTTA AGAGACTTGGGTCTTAACATAAAAAGTGATCAAATTGAAAAAGAGATGAGAAAAAAAAAA AAAAAAAAAAGAAAAAAAAAAGATAATAATATAAATCAATGTGATAATAAAAATATGTAC CATTTTAAAATTTTGCATAATTTATTTTTCCAAACAATTAAATATATATATCCAAAAAAA AATAACTTCACATATTATATGAAGAATTTTTTGATGAGGAAGTATTTATGTAATTATCAT ATGAATAGAAGTAATAAGAATTGCTTCAATCATTATGATAGAGAAAATATAGATCTACAC AAGAAAAAAAAAATAATAATAATAAAAAAAAAAAATAATAATAATAATAATAATAATAAT AATAATAATAATAATAGTCATCTCATTTTTAGGCCCTTGGCTGATAACAATTTTTTTAAT ATATTTGTTCGTAATATAAACGAAAAGAAAAAAGGAAATATATATTTTAAGGCCACACAG GAAAGAGAGGATGCTAATATTAAGCGTGGTGGTACTTTGGGTTGTGATAAAATTAAAGAA AAAGAAAGTTCTGAATATTTTGTAGATAACAAAAAATTAAAGAACAAAAGTTCTAATTTA ACAGACAATTGTGATAATAAGATAAATAAATATGATTACAACGATGATGATAATGATGAT AAGGATGATGATGATGATAATGATGACAATGATAATGATAATGATGATAATGATGATGAT GATAATGAATACACATTTGAAGATATGAGTACAAAAGATTTACCTTGCATAATAAAATAC ATAAAAAATAAAACTAAAAAAGATAAAATAATATATGTTGGTTTTTCACAAGGTAGTATT CAGTTACTTATAAGTTCATGTTTAAACGAATATGTACGAAAAAGTATAAAACGATGTTAT TTAATGTCATTACCTATTATATTAAGAAATAAATATAATTTAGAAATCCCTATGAAATTT TTATTATATATTTCTAAATATTACAGTTTTGTTTTTAAAGGGAAATCATTTTTTCAGCAT ATGATACCATATCACATTAGTACATTTATTATAAGTAATTTGGCACATATAATAGCACAT CATGTTTTTAAATATTATAATGAAAATATAAAACCTGAAGAAAAAAAATTATTCTTTTAT CATACCCCTAATGGGTCCACATCAAAAGCAAATTTAACGAGATGGGCAAAAGCATTTAAT ACATGTCCCGTTACAAATGTTCTAGAAAAATATCCACATGAATGTGCATTTCCAATAACA TTAATATATGGAAATAAAGATACTATTATACACGTAGACAAATCCATAAAATATATGAAC AAGATTTTCGACAGAAAAATTTTAAAAATAATTACAGTGCCTAATTGGGCACACTTGGAC CCTTTATGGTCTGACAATGATGGGATAGTAATTTCTTGTATTTTAAAAGATATAAACAGA GGTGATTAA
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  • Fasta :-

    MPKPPFSNITQKLGNLLNICKDMCRKGYNCYYIKEKENDKGSQEDVRCHIKNKINIKRNE EKAEKGETLDQMEKLLLDLTQGKYKAEKHYVYTIDGYRLNLYRIVNNNSENIINDKVVQK ERINEQVFEEDKKEVFCLNHGLFESSINYTCKGYNSLTFQIFSNNHDVWISNNRGNNFTQ YVGKNIAINKLRENYTEEDLRDLGLNIKSDQIEKEMRKKKKKKRKKKDNNINQCDNKNMY HFKILHNLFFQTIKYIYPKKNNFTYYMKNFLMRKYLCNYHMNRSNKNCFNHYDRENIDLH KKKKIIIIKKKNNNNNNNNNNNNNNSHLIFRPLADNNFFNIFVRNINEKKKGNIYFKATQ EREDANIKRGGTLGCDKIKEKESSEYFVDNKKLKNKSSNLTDNCDNKINKYDYNDDDNDD KDDDDDNDDNDNDNDDNDDDDNEYTFEDMSTKDLPCIIKYIKNKTKKDKIIYVGFSQGSI QLLISSCLNEYVRKSIKRCYLMSLPIILRNKYNLEIPMKFLLYISKYYSFVFKGKSFFQH MIPYHISTFIISNLAHIIAHHVFKYYNENIKPEEKKLFFYHTPNGSTSKANLTRWAKAFN TCPVTNVLEKYPHECAFPITLIYGNKDTIIHVDKSIKYMNKIFDRKILKIITVPNWAHLD PLWSDNDGIVISCILKDINRGD

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PF3D7_1126600495 SYVRKSIKRC0.997unspPF3D7_1126600495 SYVRKSIKRC0.997unspPF3D7_1126600495 SYVRKSIKRC0.997unspPF3D7_112660042 SNDKGSQEDV0.997unspPF3D7_1126600450 SFEDMSTKDL0.998unsp

PF11_0276      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India