PF3D7_1128700 | GPI-anchor transamidase, putative

_IDPredictionOTHERSPmTPCS_Position
PF3D7_1128700SP0.0101110.9896950.000193CS pos: 20-21. VCG-SV. Pr: 0.9363
No Results

  • Fasta :-

    >PF3D7_1128700 MGIKIIIYIFFLSWAKWVCGSVNFTGFDNKNMIGKHVELEGRYKKEYIDRFFLEELRKHN YMNNNVILLSTSRHYFNYRHTTNLLIAYKYLKYFGDTMDKNILLMIPFDQACDCRNIREG QIFREYELFPSSHNKETKIENINLYENLNIDYKNNNVRDEQIRRVLRHRYDAFTPKKNRL YNNGNNEKNLFLYMTGHGGVNFLKIQEFNIISSSEFNIYIQELLIKNFYKYIFVIIDTCQ GYSFYDDILNFVYKKKINNIFFLSSSKRNENSYSLFSSSYLSVSTVDRFTYHFFNYLQQI HKIYEKEPSKNIKAFSLYNILNYLKTQHIMSEPTTNNSKFNSSIFLHDKNILFFNSNLLI IHKDDVSIIYQDKQTHNHKYICLDNLSKCGHIKNNVHKKMQTLYEQTLYYNNNQQNFFSN HMSNFTDYFFTHDIYNIYNIYNVYNIYNVYNIYNVYDIYNVYSFLILLLSLFFIMCSLLT YYIVFFTEKAKMT
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_1128700.fa Sequence name : PF3D7_1128700 Sequence length : 493 VALUES OF COMPUTED PARAMETERS Coef20 : 4.344 CoefTot : -0.780 ChDiff : 12 ZoneTo : 27 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.629 2.712 0.541 0.860 MesoH : 0.221 0.633 -0.218 0.415 MuHd_075 : 9.904 8.437 3.858 2.759 MuHd_095 : 24.501 17.585 5.744 6.195 MuHd_100 : 20.386 13.781 4.707 4.775 MuHd_105 : 19.619 13.921 5.122 4.765 Hmax_075 : 17.000 18.500 4.691 6.000 Hmax_095 : 19.950 20.913 3.395 7.989 Hmax_100 : 18.200 18.700 4.527 6.630 Hmax_105 : 18.100 18.783 4.482 6.277 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8408 0.1592 DFMC : 0.9190 0.0810
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 493 PF3D7_1128700 MGIKIIIYIFFLSWAKWVCGSVNFTGFDNKNMIGKHVELEGRYKKEYIDRFFLEELRKHNYMNNNVILLSTSRHYFNYRH 80 TTNLLIAYKYLKYFGDTMDKNILLMIPFDQACDCRNIREGQIFREYELFPSSHNKETKIENINLYENLNIDYKNNNVRDE 160 QIRRVLRHRYDAFTPKKNRLYNNGNNEKNLFLYMTGHGGVNFLKIQEFNIISSSEFNIYIQELLIKNFYKYIFVIIDTCQ 240 GYSFYDDILNFVYKKKINNIFFLSSSKRNENSYSLFSSSYLSVSTVDRFTYHFFNYLQQIHKIYEKEPSKNIKAFSLYNI 320 LNYLKTQHIMSEPTTNNSKFNSSIFLHDKNILFFNSNLLIIHKDDVSIIYQDKQTHNHKYICLDNLSKCGHIKNNVHKKM 400 QTLYEQTLYYNNNQQNFFSNHMSNFTDYFFTHDIYNIYNIYNVYNIYNVYNIYNVYDIYNVYSFLILLLSLFFIMCSLLT 480 YYIVFFTEKAKMT 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ............. 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_1128700 4 ---MGIK|II 0.062 . PF3D7_1128700 16 FFLSWAK|WV 0.070 . PF3D7_1128700 30 FTGFDNK|NM 0.057 . PF3D7_1128700 35 NKNMIGK|HV 0.104 . PF3D7_1128700 42 HVELEGR|YK 0.091 . PF3D7_1128700 44 ELEGRYK|KE 0.058 . PF3D7_1128700 45 LEGRYKK|EY 0.293 . PF3D7_1128700 50 KKEYIDR|FF 0.105 . PF3D7_1128700 57 FFLEELR|KH 0.061 . PF3D7_1128700 58 FLEELRK|HN 0.074 . PF3D7_1128700 73 ILLSTSR|HY 0.090 . PF3D7_1128700 79 RHYFNYR|HT 0.103 . PF3D7_1128700 89 NLLIAYK|YL 0.069 . PF3D7_1128700 92 IAYKYLK|YF 0.073 . PF3D7_1128700 100 FGDTMDK|NI 0.054 . PF3D7_1128700 115 DQACDCR|NI 0.112 . PF3D7_1128700 118 CDCRNIR|EG 0.147 . PF3D7_1128700 124 REGQIFR|EY 0.083 . PF3D7_1128700 135 FPSSHNK|ET 0.081 . PF3D7_1128700 138 SHNKETK|IE 0.076 . PF3D7_1128700 153 NLNIDYK|NN 0.062 . PF3D7_1128700 158 YKNNNVR|DE 0.099 . PF3D7_1128700 163 VRDEQIR|RV 0.103 . PF3D7_1128700 164 RDEQIRR|VL 0.112 . PF3D7_1128700 167 QIRRVLR|HR 0.258 . PF3D7_1128700 169 RRVLRHR|YD 0.084 . PF3D7_1128700 176 YDAFTPK|KN 0.066 . PF3D7_1128700 177 DAFTPKK|NR 0.071 . PF3D7_1128700 179 FTPKKNR|LY 0.084 . PF3D7_1128700 188 NNGNNEK|NL 0.064 . PF3D7_1128700 204 GGVNFLK|IQ 0.064 . PF3D7_1128700 226 IQELLIK|NF 0.064 . PF3D7_1128700 230 LIKNFYK|YI 0.101 . PF3D7_1128700 254 ILNFVYK|KK 0.071 . PF3D7_1128700 255 LNFVYKK|KI 0.107 . PF3D7_1128700 256 NFVYKKK|IN 0.102 . PF3D7_1128700 267 FFLSSSK|RN 0.056 . PF3D7_1128700 268 FLSSSKR|NE 0.142 . PF3D7_1128700 288 SVSTVDR|FT 0.132 . PF3D7_1128700 302 YLQQIHK|IY 0.065 . PF3D7_1128700 306 IHKIYEK|EP 0.065 . PF3D7_1128700 310 YEKEPSK|NI 0.056 . PF3D7_1128700 313 EPSKNIK|AF 0.080 . PF3D7_1128700 325 NILNYLK|TQ 0.052 . PF3D7_1128700 339 PTTNNSK|FN 0.066 . PF3D7_1128700 349 SIFLHDK|NI 0.061 . PF3D7_1128700 363 NLLIIHK|DD 0.062 . PF3D7_1128700 373 SIIYQDK|QT 0.067 . PF3D7_1128700 379 KQTHNHK|YI 0.065 . PF3D7_1128700 388 CLDNLSK|CG 0.059 . PF3D7_1128700 393 SKCGHIK|NN 0.074 . PF3D7_1128700 398 IKNNVHK|KM 0.077 . PF3D7_1128700 399 KNNVHKK|MQ 0.195 . PF3D7_1128700 489 IVFFTEK|AK 0.062 . PF3D7_1128700 491 FFTEKAK|MT 0.070 . ____________________________^_________________

  • Fasta :-

    >PF3D7_1128700 ATGGGGATAAAAATTATAATTTATATATTTTTTCTATCGTGGGCGAAATGGGTGTGTGGG TCTGTTAATTTTACCGGGTTTGATAACAAAAATATGATAGGTAAGCACGTGGAACTAGAA GGGAGGTATAAAAAGGAATATATAGATAGGTTTTTTTTAGAAGAATTAAGAAAACACAAT TATATGAATAACAATGTTATATTATTAAGTACATCAAGACATTATTTTAATTATAGACAT ACCACTAATTTATTGATTGCATATAAATATCTTAAATATTTCGGTGATACTATGGATAAG AATATTTTATTAATGATTCCATTTGATCAAGCTTGTGATTGTAGGAATATAAGAGAAGGT CAAATATTTCGAGAATATGAATTATTTCCTAGTAGTCATAATAAAGAAACAAAAATAGAA AATATAAATTTATATGAGAATTTAAATATTGATTATAAAAATAATAATGTACGTGATGAA CAAATTAGAAGAGTACTTAGACATAGATATGATGCTTTTACACCTAAAAAAAATAGATTA TATAATAATGGAAATAATGAGAAAAATTTATTTCTTTATATGACCGGACATGGTGGTGTG AATTTTTTAAAAATTCAAGAATTTAATATTATTAGTTCTTCTGAATTTAATATATATATA CAAGAATTACTTATCAAAAATTTTTATAAATATATATTCGTAATTATTGATACGTGTCAA GGATATAGTTTTTATGATGATATTCTAAATTTTGTATATAAAAAAAAAATTAATAATATC TTCTTTTTATCATCTTCTAAAAGAAATGAAAATAGTTATAGTTTATTTTCCAGTAGTTAT TTAAGCGTTTCAACGGTCGACAGATTTACATACCATTTTTTTAATTATCTTCAACAAATA CATAAAATATATGAAAAAGAACCATCTAAAAATATAAAAGCCTTTTCATTATATAACATT TTAAATTATTTAAAAACACAACATATTATGTCAGAACCTACTACAAATAATTCTAAATTT AATTCGTCCATTTTTTTACATGATAAAAATATTCTTTTCTTCAATTCTAATTTGTTAATT ATACATAAAGATGATGTTTCTATAATATATCAAGATAAACAAACACACAATCACAAATAT ATATGTTTGGATAATCTATCTAAATGTGGTCATATAAAAAATAATGTACATAAAAAAATG CAAACTCTATATGAACAAACGTTATATTATAATAATAATCAACAGAATTTCTTTTCTAAT CATATGTCTAATTTTACAGATTATTTTTTTACACATGATATATATAATATATATAATATA TATAATGTATATAATATATATAATGTATATAATATATATAATGTATATGATATATATAAT GTATATTCTTTTCTTATATTATTGCTCTCTTTATTTTTTATTATGTGTTCTCTTCTTACA TATTATATTGTTTTTTTTACAGAAAAGGCTAAAATGACATAA
  • Download Fasta

  • Fasta :-

    MGIKIIIYIFFLSWAKWVCGSVNFTGFDNKNMIGKHVELEGRYKKEYIDRFFLEELRKHN YMNNNVILLSTSRHYFNYRHTTNLLIAYKYLKYFGDTMDKNILLMIPFDQACDCRNIREG QIFREYELFPSSHNKETKIENINLYENLNIDYKNNNVRDEQIRRVLRHRYDAFTPKKNRL YNNGNNEKNLFLYMTGHGGVNFLKIQEFNIISSSEFNIYIQELLIKNFYKYIFVIIDTCQ GYSFYDDILNFVYKKKINNIFFLSSSKRNENSYSLFSSSYLSVSTVDRFTYHFFNYLQQI HKIYEKEPSKNIKAFSLYNILNYLKTQHIMSEPTTNNSKFNSSIFLHDKNILFFNSNLLI IHKDDVSIIYQDKQTHNHKYICLDNLSKCGHIKNNVHKKMQTLYEQTLYYNNNQQNFFSN HMSNFTDYFFTHDIYNIYNIYNVYNIYNVYNIYNVYDIYNVYSFLILLLSLFFIMCSLLT YYIVFFTEKAKMT

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PF11_0298      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India