PF3D7_1226800 | ataxin-3, putative

_IDPredictionOTHERSPmTPCS_Position
PF3D7_1226800OTHER0.9999510.0000100.000038
No Results

  • Fasta :-

    >PF3D7_1226800 MSKKYVYWEKQGNDRMCGLHCINSILQGPYYSEDVLASIGKELDEKENEFLRSSSNDLVR NNSFNVLDDGFINISVIIESLRRMNILLKHVYEEDLIKIISSNHQDIGYICNLQEHWFSI RKIHNTWYVLDSLKSSPLYIKDMNLKFYFNDVIKKYHIFSVQNINPYVSLPKPDINFIPK NINQFYIPTNEISEISGVSDNFLLEDRYNLNKSENYSAFNQINNTPNFRWPENGGRRLND DINTTNMNNVDDDDDLKIALKLSMEEYIKNMVPPLEETSDENCINVMVKLPNKKIHKRFS FTKTLSDLFYWIEYESAQGQDITSSLLFKNNYYLYQLYPRRKFCKYQNGSIELHTGGKTE MVHDKCLKDLNFEKEETFMIS
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_1226800.fa Sequence name : PF3D7_1226800 Sequence length : 381 VALUES OF COMPUTED PARAMETERS Coef20 : 3.191 CoefTot : -0.428 ChDiff : -9 ZoneTo : 8 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.524 1.112 -0.012 0.431 MesoH : -1.111 0.051 -0.592 0.141 MuHd_075 : 35.718 16.404 9.563 5.130 MuHd_095 : 26.863 12.810 6.670 5.126 MuHd_100 : 25.275 12.161 6.055 4.501 MuHd_105 : 17.747 8.659 4.075 3.105 Hmax_075 : 7.175 3.938 0.560 2.083 Hmax_095 : -1.487 1.225 -1.869 1.400 Hmax_100 : 1.400 -0.500 -2.272 1.910 Hmax_105 : -1.517 0.117 -2.252 1.820 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9003 0.0997 DFMC : 0.8692 0.1308
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 381 PF3D7_1226800 MSKKYVYWEKQGNDRMCGLHCINSILQGPYYSEDVLASIGKELDEKENEFLRSSSNDLVRNNSFNVLDDGFINISVIIES 80 LRRMNILLKHVYEEDLIKIISSNHQDIGYICNLQEHWFSIRKIHNTWYVLDSLKSSPLYIKDMNLKFYFNDVIKKYHIFS 160 VQNINPYVSLPKPDINFIPKNINQFYIPTNEISEISGVSDNFLLEDRYNLNKSENYSAFNQINNTPNFRWPENGGRRLND 240 DINTTNMNNVDDDDDLKIALKLSMEEYIKNMVPPLEETSDENCINVMVKLPNKKIHKRFSFTKTLSDLFYWIEYESAQGQ 320 DITSSLLFKNNYYLYQLYPRRKFCKYQNGSIELHTGGKTEMVHDKCLKDLNFEKEETFMIS 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ............................................................. 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_1226800 3 ----MSK|KY 0.062 . PF3D7_1226800 4 ---MSKK|YV 0.179 . PF3D7_1226800 10 KYVYWEK|QG 0.066 . PF3D7_1226800 15 EKQGNDR|MC 0.088 . PF3D7_1226800 41 VLASIGK|EL 0.078 . PF3D7_1226800 46 GKELDEK|EN 0.060 . PF3D7_1226800 52 KENEFLR|SS 0.128 . PF3D7_1226800 60 SSNDLVR|NN 0.099 . PF3D7_1226800 82 VIIESLR|RM 0.077 . PF3D7_1226800 83 IIESLRR|MN 0.090 . PF3D7_1226800 89 RMNILLK|HV 0.076 . PF3D7_1226800 98 YEEDLIK|II 0.066 . PF3D7_1226800 121 EHWFSIR|KI 0.085 . PF3D7_1226800 122 HWFSIRK|IH 0.066 . PF3D7_1226800 134 YVLDSLK|SS 0.066 . PF3D7_1226800 141 SSPLYIK|DM 0.061 . PF3D7_1226800 146 IKDMNLK|FY 0.061 . PF3D7_1226800 154 YFNDVIK|KY 0.065 . PF3D7_1226800 155 FNDVIKK|YH 0.093 . PF3D7_1226800 172 PYVSLPK|PD 0.058 . PF3D7_1226800 180 DINFIPK|NI 0.068 . PF3D7_1226800 207 NFLLEDR|YN 0.066 . PF3D7_1226800 212 DRYNLNK|SE 0.073 . PF3D7_1226800 229 NNTPNFR|WP 0.092 . PF3D7_1226800 236 WPENGGR|RL 0.094 . PF3D7_1226800 237 PENGGRR|LN 0.158 . PF3D7_1226800 257 DDDDDLK|IA 0.055 . PF3D7_1226800 261 DLKIALK|LS 0.054 . PF3D7_1226800 269 SMEEYIK|NM 0.055 . PF3D7_1226800 289 CINVMVK|LP 0.067 . PF3D7_1226800 293 MVKLPNK|KI 0.063 . PF3D7_1226800 294 VKLPNKK|IH 0.071 . PF3D7_1226800 297 PNKKIHK|RF 0.059 . PF3D7_1226800 298 NKKIHKR|FS 0.291 . PF3D7_1226800 303 KRFSFTK|TL 0.087 . PF3D7_1226800 329 TSSLLFK|NN 0.065 . PF3D7_1226800 340 LYQLYPR|RK 0.073 . PF3D7_1226800 341 YQLYPRR|KF 0.130 . PF3D7_1226800 342 QLYPRRK|FC 0.095 . PF3D7_1226800 345 PRRKFCK|YQ 0.091 . PF3D7_1226800 358 ELHTGGK|TE 0.059 . PF3D7_1226800 365 TEMVHDK|CL 0.078 . PF3D7_1226800 368 VHDKCLK|DL 0.065 . PF3D7_1226800 374 KDLNFEK|EE 0.059 . ____________________________^_________________

  • Fasta :-

    >PF3D7_1226800 ATGAGCAAGAAATATGTATACTGGGAAAAACAAGGTAATGATCGTATGTGTGGATTGCAT TGTATAAATAGTATCCTTCAAGGCCCATATTACAGTGAAGATGTATTGGCTAGTATTGGA AAAGAATTAGATGAGAAAGAAAATGAATTTTTACGAAGTTCATCTAACGATTTAGTAAGA AATAATTCTTTTAATGTATTGGATGATGGGTTTATAAATATATCTGTAATAATTGAAAGT TTAAGAAGAATGAATATATTATTAAAACATGTTTATGAAGAAGATTTAATTAAAATAATA TCTAGTAATCATCAAGATATTGGTTATATTTGTAATTTACAAGAACATTGGTTTAGTATA CGTAAAATTCATAATACTTGGTATGTATTAGACAGTTTAAAAAGTTCTCCTTTATATATT AAAGATATGAATTTAAAATTTTATTTTAATGATGTTATTAAAAAATATCATATATTCTCT GTTCAAAATATAAATCCTTATGTATCTTTACCCAAACCAGATATCAATTTTATACCTAAA AATATTAATCAATTTTATATCCCAACAAATGAAATATCTGAAATTTCAGGAGTATCAGAT AACTTTTTATTAGAAGATAGATATAACCTGAACAAGTCAGAAAATTATTCAGCATTCAAC CAAATAAATAACACACCAAATTTTCGTTGGCCAGAAAATGGAGGTAGGAGATTAAATGAT GACATAAATACAACAAATATGAATAATGTAGACGACGATGATGATTTAAAAATTGCATTA AAATTGTCCATGGAGGAATATATTAAGAATATGGTTCCACCGCTTGAAGAAACATCGGAT GAAAATTGTATAAATGTGATGGTTAAATTACCGAATAAAAAAATCCACAAAAGGTTTAGT TTTACCAAAACTTTATCGGACTTATTTTATTGGATTGAATATGAGTCTGCTCAGGGCCAA GATATTACTTCATCTTTACTTTTTAAAAATAATTATTACCTTTATCAATTATACCCAAGA AGAAAATTCTGTAAGTATCAAAATGGTTCTATCGAATTACATACCGGAGGCAAGACCGAA ATGGTTCATGATAAATGCCTGAAAGATTTGAACTTTGAAAAAGAGGAAACATTTATGATT TCGTAA
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  • Fasta :-

    MSKKYVYWEKQGNDRMCGLHCINSILQGPYYSEDVLASIGKELDEKENEFLRSSSNDLVR NNSFNVLDDGFINISVIIESLRRMNILLKHVYEEDLIKIISSNHQDIGYICNLQEHWFSI RKIHNTWYVLDSLKSSPLYIKDMNLKFYFNDVIKKYHIFSVQNINPYVSLPKPDINFIPK NINQFYIPTNEISEISGVSDNFLLEDRYNLNKSENYSAFNQINNTPNFRWPENGGRRLND DINTTNMNNVDDDDDLKIALKLSMEEYIKNMVPPLEETSDENCINVMVKLPNKKIHKRFS FTKTLSDLFYWIEYESAQGQDITSSLLFKNNYYLYQLYPRRKFCKYQNGSIELHTGGKTE MVHDKCLKDLNFEKEETFMIS

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PF3D7_1226800300 SHKRFSFTKT0.994unspPF3D7_1226800300 SHKRFSFTKT0.994unspPF3D7_1226800300 SHKRFSFTKT0.994unspPF3D7_122680054 SFLRSSSNDL0.992unspPF3D7_1226800263 SALKLSMEEY0.994unsp

2277.t00259      MAL12P1.259      PFL1295w      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India