PF3D7_1234400 | microgamete surface protein MiGS, putative

  • Computed_GO_Component_IDs:  GO:0016020      

  • Computed_GO_Components:  membrane      

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0009986      GO:0044310      

  • Curated_GO_Components:  cell surface      osmiophilic body      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PF3D7_1234400OTHER0.9802110.0073460.012444
No Results

  • Fasta :-

    >PF3D7_1234400 MLFLLHIYIPQNSVAYVSNVFPMTYIYPSFTFVSFLLFSYLFSHFTYILKYEKKIIKRIL SSNSLHVVHNFSFVKNDIERNIIKDDKNDENIDNINKQYMSDEEKIEKKEKIEKNEKIEK NENGDHPQLFQHNYNNLNIRHNNNQMLDFLSSVQKKESRRFYSINLKEKNFRWSMILSIG SKKKDLELGILTNSNITGLYCSYNYKDNDELKNLKYDITLSEDLKYVECKSIMCDNVEHS SPCLPLENYFKLINDYKIRKRSCQNKFCDYVNNMNFLNMIDKLNDRNLSICSFNTTINNE QIKGFYFKDSFFLYKKIKTSFLYFACITESDPLHFNNKLSGFIGLANYINDKEKYHNQNK KIYSTILYSFIYKSISKKNIFSLCFKQGGGFITFGGYDQNVLTKKEAPLSKIQLYSIDKN TNKKYVQQLNSVDVYDLLWIHYYAKNKSYYSLFLKNVTATMDQNKMNSVINAEAKVDSYN YFLSFPADITIKLKNFVHDKCPDTDQFNDCSNLIEKGLIKLKNKNIKDFPKIELLFEEGT VIVHPEDYIIHESDGVYRVLINSSGELKLGIPFFLNKYLIFDNENERLGVSKSECALELN DNELFGVDLSSNDDPYEEKDDDSMKENLFQKYKTHIILISSGIFVSSIIGSILYFS
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_1234400.fa Sequence name : PF3D7_1234400 Sequence length : 656 VALUES OF COMPUTED PARAMETERS Coef20 : 3.998 CoefTot : -1.943 ChDiff : 2 ZoneTo : 76 KR : 6 DE : 1 CleavSite : 68 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.106 2.206 0.488 0.780 MesoH : 0.130 0.596 -0.290 0.331 MuHd_075 : 39.411 24.879 11.633 8.866 MuHd_095 : 36.791 30.233 12.001 11.067 MuHd_100 : 36.901 30.635 11.711 10.699 MuHd_105 : 37.675 31.908 11.967 10.466 Hmax_075 : 13.650 11.300 3.130 4.680 Hmax_095 : 10.700 21.100 2.492 7.160 Hmax_100 : 10.700 21.100 2.492 7.160 Hmax_105 : 12.600 20.912 2.554 7.315 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0930 0.9070 DFMC : 0.2060 0.7940 This protein is probably imported in chloroplast. f(Ser) = 0.1316 f(Arg) = 0.0132 CMi = 1.48810 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 656 PF3D7_1234400 MLFLLHIYIPQNSVAYVSNVFPMTYIYPSFTFVSFLLFSYLFSHFTYILKYEKKIIKRILSSNSLHVVHNFSFVKNDIER 80 NIIKDDKNDENIDNINKQYMSDEEKIEKKEKIEKNEKIEKNENGDHPQLFQHNYNNLNIRHNNNQMLDFLSSVQKKESRR 160 FYSINLKEKNFRWSMILSIGSKKKDLELGILTNSNITGLYCSYNYKDNDELKNLKYDITLSEDLKYVECKSIMCDNVEHS 240 SPCLPLENYFKLINDYKIRKRSCQNKFCDYVNNMNFLNMIDKLNDRNLSICSFNTTINNEQIKGFYFKDSFFLYKKIKTS 320 FLYFACITESDPLHFNNKLSGFIGLANYINDKEKYHNQNKKIYSTILYSFIYKSISKKNIFSLCFKQGGGFITFGGYDQN 400 VLTKKEAPLSKIQLYSIDKNTNKKYVQQLNSVDVYDLLWIHYYAKNKSYYSLFLKNVTATMDQNKMNSVINAEAKVDSYN 480 YFLSFPADITIKLKNFVHDKCPDTDQFNDCSNLIEKGLIKLKNKNIKDFPKIELLFEEGTVIVHPEDYIIHESDGVYRVL 560 INSSGELKLGIPFFLNKYLIFDNENERLGVSKSECALELNDNELFGVDLSSNDDPYEEKDDDSMKENLFQKYKTHIILIS 640 SGIFVSSIIGSILYFS 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................ 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_1234400 50 HFTYILK|YE 0.059 . PF3D7_1234400 53 YILKYEK|KI 0.058 . PF3D7_1234400 54 ILKYEKK|II 0.127 . PF3D7_1234400 57 YEKKIIK|RI 0.058 . PF3D7_1234400 58 EKKIIKR|IL 0.159 . PF3D7_1234400 75 HNFSFVK|ND 0.058 . PF3D7_1234400 80 VKNDIER|NI 0.093 . PF3D7_1234400 84 IERNIIK|DD 0.072 . PF3D7_1234400 87 NIIKDDK|ND 0.062 . PF3D7_1234400 97 NIDNINK|QY 0.057 . PF3D7_1234400 105 YMSDEEK|IE 0.060 . PF3D7_1234400 108 DEEKIEK|KE 0.054 . PF3D7_1234400 109 EEKIEKK|EK 0.092 . PF3D7_1234400 111 KIEKKEK|IE 0.060 . PF3D7_1234400 114 KKEKIEK|NE 0.057 . PF3D7_1234400 117 KIEKNEK|IE 0.055 . PF3D7_1234400 120 KNEKIEK|NE 0.061 . PF3D7_1234400 140 YNNLNIR|HN 0.104 . PF3D7_1234400 155 FLSSVQK|KE 0.069 . PF3D7_1234400 156 LSSVQKK|ES 0.130 . PF3D7_1234400 159 VQKKESR|RF 0.076 . PF3D7_1234400 160 QKKESRR|FY 0.232 . PF3D7_1234400 167 FYSINLK|EK 0.057 . PF3D7_1234400 169 SINLKEK|NF 0.072 . PF3D7_1234400 172 LKEKNFR|WS 0.088 . PF3D7_1234400 182 ILSIGSK|KK 0.066 . PF3D7_1234400 183 LSIGSKK|KD 0.078 . PF3D7_1234400 184 SIGSKKK|DL 0.210 . PF3D7_1234400 206 YCSYNYK|DN 0.078 . PF3D7_1234400 212 KDNDELK|NL 0.065 . PF3D7_1234400 215 DELKNLK|YD 0.056 . PF3D7_1234400 225 TLSEDLK|YV 0.090 . PF3D7_1234400 230 LKYVECK|SI 0.095 . PF3D7_1234400 251 PLENYFK|LI 0.061 . PF3D7_1234400 257 KLINDYK|IR 0.057 . PF3D7_1234400 259 INDYKIR|KR 0.089 . PF3D7_1234400 260 NDYKIRK|RS 0.078 . PF3D7_1234400 261 DYKIRKR|SC 0.234 . PF3D7_1234400 266 KRSCQNK|FC 0.121 . PF3D7_1234400 282 FLNMIDK|LN 0.067 . PF3D7_1234400 286 IDKLNDR|NL 0.079 . PF3D7_1234400 303 INNEQIK|GF 0.073 . PF3D7_1234400 308 IKGFYFK|DS 0.075 . PF3D7_1234400 315 DSFFLYK|KI 0.070 . PF3D7_1234400 316 SFFLYKK|IK 0.073 . PF3D7_1234400 318 FLYKKIK|TS 0.067 . PF3D7_1234400 338 PLHFNNK|LS 0.070 . PF3D7_1234400 352 ANYINDK|EK 0.061 . PF3D7_1234400 354 YINDKEK|YH 0.076 . PF3D7_1234400 360 KYHNQNK|KI 0.064 . PF3D7_1234400 361 YHNQNKK|IY 0.197 . PF3D7_1234400 373 LYSFIYK|SI 0.111 . PF3D7_1234400 377 IYKSISK|KN 0.057 . PF3D7_1234400 378 YKSISKK|NI 0.118 . PF3D7_1234400 386 IFSLCFK|QG 0.074 . PF3D7_1234400 404 DQNVLTK|KE 0.059 . PF3D7_1234400 405 QNVLTKK|EA 0.096 . PF3D7_1234400 411 KEAPLSK|IQ 0.059 . PF3D7_1234400 419 QLYSIDK|NT 0.062 . PF3D7_1234400 423 IDKNTNK|KY 0.072 . PF3D7_1234400 424 DKNTNKK|YV 0.158 . PF3D7_1234400 445 WIHYYAK|NK 0.063 . PF3D7_1234400 447 HYYAKNK|SY 0.073 . PF3D7_1234400 455 YYSLFLK|NV 0.083 . PF3D7_1234400 465 ATMDQNK|MN 0.073 . PF3D7_1234400 475 VINAEAK|VD 0.067 . PF3D7_1234400 492 PADITIK|LK 0.055 . PF3D7_1234400 494 DITIKLK|NF 0.053 . PF3D7_1234400 500 KNFVHDK|CP 0.070 . PF3D7_1234400 516 CSNLIEK|GL 0.066 . PF3D7_1234400 520 IEKGLIK|LK 0.062 . PF3D7_1234400 522 KGLIKLK|NK 0.057 . PF3D7_1234400 524 LIKLKNK|NI 0.069 . PF3D7_1234400 527 LKNKNIK|DF 0.098 . PF3D7_1234400 531 NIKDFPK|IE 0.062 . PF3D7_1234400 558 ESDGVYR|VL 0.082 . PF3D7_1234400 568 NSSGELK|LG 0.062 . PF3D7_1234400 577 IPFFLNK|YL 0.066 . PF3D7_1234400 587 FDNENER|LG 0.065 . PF3D7_1234400 592 ERLGVSK|SE 0.089 . PF3D7_1234400 619 DDPYEEK|DD 0.065 . PF3D7_1234400 625 KDDDSMK|EN 0.058 . PF3D7_1234400 631 KENLFQK|YK 0.076 . PF3D7_1234400 633 NLFQKYK|TH 0.062 . ____________________________^_________________

  • Fasta :-

    >PF3D7_1234400 ATGTTATTCCTTTTGCATATATATATACCACAAAATTCGGTTGCTTATGTGTCTAATGTA TTTCCTATGACATATATTTACCCATCCTTTACATTTGTATCATTCCTTTTATTTTCTTAT TTGTTTTCCCATTTTACGTACATCTTAAAGTACGAAAAAAAAATTATTAAGAGAATATTA TCATCGAATTCATTACATGTTGTACATAATTTTTCCTTTGTGAAAAATGACATAGAAAGG AATATTATAAAGGATGACAAAAATGATGAAAATATAGACAATATAAATAAACAATACATG AGTGATGAAGAAAAAATTGAAAAAAAGGAAAAAATTGAAAAAAATGAAAAAATTGAAAAA AATGAAAATGGAGATCATCCACAGCTATTTCAACATAATTATAATAATTTAAATATCCGA CACAATAACAATCAAATGCTAGATTTCCTTTCTAGTGTTCAAAAAAAAGAAAGTAGAAGA TTTTATTCCATAAACCTGAAAGAGAAAAACTTTAGATGGAGTATGATATTGAGTATAGGT TCCAAAAAAAAAGATTTAGAATTAGGTATCCTTACGAATAGTAATATTACTGGTTTATAT TGTTCTTATAATTATAAAGATAATGATGAACTAAAAAACCTTAAATATGATATTACATTA TCAGAAGATTTAAAGTATGTAGAATGTAAGAGTATAATGTGTGACAATGTAGAACATAGT AGTCCTTGTTTACCTTTAGAAAATTATTTTAAATTAATAAATGATTATAAAATAAGAAAG AGAAGTTGTCAAAATAAATTTTGTGATTATGTAAACAATATGAATTTTCTAAATATGATA GATAAATTAAATGATAGAAATTTATCTATTTGTTCTTTTAATACTACAATTAATAATGAA CAAATAAAAGGTTTTTATTTTAAAGATTCCTTTTTTTTATATAAGAAAATAAAAACTTCT TTTTTATATTTTGCATGTATAACAGAAAGTGACCCTTTACATTTTAATAATAAACTTTCT GGATTTATAGGATTAGCAAATTATATTAATGATAAAGAAAAATATCATAATCAAAATAAA AAGATATACTCTACAATTTTGTATTCATTTATATATAAATCTATTTCGAAAAAAAATATT TTTTCTTTATGTTTTAAACAAGGAGGAGGATTTATTACTTTTGGTGGGTATGATCAAAAT GTCTTAACAAAAAAGGAAGCACCTTTATCAAAAATACAATTATATTCTATAGATAAAAAT ACTAATAAGAAATATGTACAACAATTAAATTCTGTTGATGTATATGATCTTTTGTGGATA CATTATTATGCAAAGAATAAATCTTATTATAGTCTTTTCCTCAAAAATGTTACAGCAACA ATGGATCAAAATAAAATGAACAGTGTAATTAATGCAGAGGCAAAAGTCGATTCCTATAAT TATTTTTTATCCTTTCCAGCTGATATTACAATAAAATTAAAAAATTTTGTTCATGACAAA TGTCCTGACACAGATCAATTTAATGACTGCTCAAATTTAATTGAAAAGGGACTCATCAAA TTGAAGAACAAAAACATAAAGGATTTTCCAAAAATAGAATTGTTATTTGAAGAAGGAACA GTAATAGTACACCCAGAAGATTATATAATACATGAAAGTGATGGTGTATATAGAGTGTTA ATAAATTCATCAGGGGAATTAAAATTAGGCATTCCATTCTTTTTAAATAAATATTTAATA TTTGATAATGAAAATGAGAGACTAGGGGTTAGTAAATCAGAATGTGCTCTTGAACTAAAC GACAATGAATTATTTGGAGTTGACCTTTCATCAAATGATGATCCTTACGAAGAAAAAGAT GACGATTCAATGAAGGAGAATTTGTTTCAGAAATACAAAACACACATTATTTTGATTTCT AGTGGGATATTTGTCTCTTCTATTATTGGAAGTATCTTATATTTTAGTTGA
  • Download Fasta

  • Fasta :-

    MLFLLHIYIPQNSVAYVSNVFPMTYIYPSFTFVSFLLFSYLFSHFTYILKYEKKIIKRIL SSNSLHVVHNFSFVKNDIERNIIKDDKNDENIDNINKQYMSDEEKIEKKEKIEKNEKIEK NENGDHPQLFQHNYNNLNIRHNNNQMLDFLSSVQKKESRRFYSINLKEKNFRWSMILSIG SKKKDLELGILTNSNITGLYCSYNYKDNDELKNLKYDITLSEDLKYVECKSIMCDNVEHS SPCLPLENYFKLINDYKIRKRSCQNKFCDYVNNMNFLNMIDKLNDRNLSICSFNTTINNE QIKGFYFKDSFFLYKKIKTSFLYFACITESDPLHFNNKLSGFIGLANYINDKEKYHNQNK KIYSTILYSFIYKSISKKNIFSLCFKQGGGFITFGGYDQNVLTKKEAPLSKIQLYSIDKN TNKKYVQQLNSVDVYDLLWIHYYAKNKSYYSLFLKNVTATMDQNKMNSVINAEAKVDSYN YFLSFPADITIKLKNFVHDKCPDTDQFNDCSNLIEKGLIKLKNKNIKDFPKIELLFEEGT VIVHPEDYIIHESDGVYRVLINSSGELKLGIPFFLNKYLIFDNENERLGVSKSECALELN DNELFGVDLSSNDDPYEEKDDDSMKENLFQKYKTHIILISSGIFVSSIIGSILYFS

No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PF3D7_1234400623 SKDDDSMKEN0.998unspPF3D7_1234400623 SKDDDSMKEN0.998unspPF3D7_1234400623 SKDDDSMKEN0.998unspPF3D7_1234400101 SKQYMSDEEK0.99unspPF3D7_1234400376 SYKSISKKNI0.996unsp

2277.t00332      MAL12P1.331      PFL1660c      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India