PF3D7_1239700 | ATP-dependent zinc metalloprotease FTSH 1

_IDPredictionOTHERSPmTPCS_Position
PF3D7_1239700OTHER0.9999920.0000010.000007
No Results

  • Fasta :-

    >PF3D7_1239700 MSSKYDNQSFLSTGSDKYGEQENSVLLHDEEDEYINENKKKRNERDKKFRYYENFFNRRR SKKWNYFIIFFLGVCLGFAIWPFFMTIITYRLFYKDNFNNTNYRTNNSSTSLKSYGNEKN KKSDNNGKVPMKDQSPNKVSPHFKPIRFEEIAGIDESKLELLEVVDFIKNREKYHEMGAR MPKGVLLVGPPGSGKTMLARAVATEANVPYIYTSGPEFIEIYVGQGAKRIRQLFAHARSV APSIVFIDEIDAIGGKRSSGSVNGAGQREHDQTLNQLLVEMDGFSNTVHIMVIGATNRID TLDSALLRPGRFDRIVYVPLPDINGRKKILEIYIKKIKSDLKLEDIEKIARLTPGFSGAD LENVVNEATILATRNNKSLVTINELYEARDKVSMGPERKSLRQSDHQRRITAYHEAGHAI VAYFLQPKTDPIHKATIISRGNALGYVEQIPVDDRHNYFKSQMEAKLAVCMGGRTAEEIV FGKSETSSGASSDISRATEIAYKMVTEWGMSDKLGPLNYKKRMGDGYSSNRLSAQTVSSI EVEVKSLVEKGKSLSEEILRRHRKELDNLAFALLDKETLSGEEIKNIIDPNNSKNYSGKV EMLKNDTKKNEKKSNSVSKNKSTISEDYDKNQNNVEQNYQSHDHTLVKNEENLNNMKNDI DDNNTRDGQVNSDSFVKRKEVTDQDINGKELSEMDNKEIKENKKLDGEELNKIIIDNDKM GDMKKNIKEVIKKMKKKQSKGSYKTYKNVLKSVSEHKELKTQKKADENKIVADNNEKSSN NSLDKNNTQGSIDEKGYKNNNNNNNNMVKNINELFEENFPEYKKYDNENNDFVKTKENYF DNFNEVIDISHIKNVDEMKKFNIFEHNLNKLFLFDIFKSD
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_1239700.fa Sequence name : PF3D7_1239700 Sequence length : 880 VALUES OF COMPUTED PARAMETERS Coef20 : 3.189 CoefTot : -0.046 ChDiff : 8 ZoneTo : 5 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.565 2.371 0.475 0.959 MesoH : -0.543 0.332 -0.336 0.218 MuHd_075 : 18.003 13.485 5.714 4.820 MuHd_095 : 8.272 5.138 2.683 2.490 MuHd_100 : 6.267 3.720 0.739 1.384 MuHd_105 : 11.661 4.139 3.050 1.771 Hmax_075 : 10.033 3.383 0.116 2.590 Hmax_095 : 3.200 -0.200 -1.402 1.900 Hmax_100 : -3.500 -3.300 -2.993 0.580 Hmax_105 : 1.000 -5.900 -2.540 -0.650 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9252 0.0748 DFMC : 0.9383 0.0617
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 880 PF3D7_1239700 MSSKYDNQSFLSTGSDKYGEQENSVLLHDEEDEYINENKKKRNERDKKFRYYENFFNRRRSKKWNYFIIFFLGVCLGFAI 80 WPFFMTIITYRLFYKDNFNNTNYRTNNSSTSLKSYGNEKNKKSDNNGKVPMKDQSPNKVSPHFKPIRFEEIAGIDESKLE 160 LLEVVDFIKNREKYHEMGARMPKGVLLVGPPGSGKTMLARAVATEANVPYIYTSGPEFIEIYVGQGAKRIRQLFAHARSV 240 APSIVFIDEIDAIGGKRSSGSVNGAGQREHDQTLNQLLVEMDGFSNTVHIMVIGATNRIDTLDSALLRPGRFDRIVYVPL 320 PDINGRKKILEIYIKKIKSDLKLEDIEKIARLTPGFSGADLENVVNEATILATRNNKSLVTINELYEARDKVSMGPERKS 400 LRQSDHQRRITAYHEAGHAIVAYFLQPKTDPIHKATIISRGNALGYVEQIPVDDRHNYFKSQMEAKLAVCMGGRTAEEIV 480 FGKSETSSGASSDISRATEIAYKMVTEWGMSDKLGPLNYKKRMGDGYSSNRLSAQTVSSIEVEVKSLVEKGKSLSEEILR 560 RHRKELDNLAFALLDKETLSGEEIKNIIDPNNSKNYSGKVEMLKNDTKKNEKKSNSVSKNKSTISEDYDKNQNNVEQNYQ 640 SHDHTLVKNEENLNNMKNDIDDNNTRDGQVNSDSFVKRKEVTDQDINGKELSEMDNKEIKENKKLDGEELNKIIIDNDKM 720 GDMKKNIKEVIKKMKKKQSKGSYKTYKNVLKSVSEHKELKTQKKADENKIVADNNEKSSNNSLDKNNTQGSIDEKGYKNN 800 NNNNNNMVKNINELFEENFPEYKKYDNENNDFVKTKENYFDNFNEVIDISHIKNVDEMKKFNIFEHNLNKLFLFDIFKSD 880 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_1239700 4 ---MSSK|YD 0.072 . PF3D7_1239700 17 LSTGSDK|YG 0.074 . PF3D7_1239700 39 EYINENK|KK 0.060 . PF3D7_1239700 40 YINENKK|KR 0.075 . PF3D7_1239700 41 INENKKK|RN 0.115 . PF3D7_1239700 42 NENKKKR|NE 0.230 . PF3D7_1239700 45 KKKRNER|DK 0.257 . PF3D7_1239700 47 KRNERDK|KF 0.084 . PF3D7_1239700 48 RNERDKK|FR 0.278 . PF3D7_1239700 50 ERDKKFR|YY 0.143 . PF3D7_1239700 58 YENFFNR|RR 0.107 . PF3D7_1239700 59 ENFFNRR|RS 0.099 . PF3D7_1239700 60 NFFNRRR|SK 0.165 . PF3D7_1239700 62 FNRRRSK|KW 0.141 . PF3D7_1239700 63 NRRRSKK|WN 0.479 . PF3D7_1239700 91 MTIITYR|LF 0.081 . PF3D7_1239700 95 TYRLFYK|DN 0.077 . PF3D7_1239700 104 FNNTNYR|TN 0.085 . PF3D7_1239700 113 NSSTSLK|SY 0.113 . PF3D7_1239700 119 KSYGNEK|NK 0.058 . PF3D7_1239700 121 YGNEKNK|KS 0.071 . PF3D7_1239700 122 GNEKNKK|SD 0.155 . PF3D7_1239700 128 KSDNNGK|VP 0.060 . PF3D7_1239700 132 NGKVPMK|DQ 0.079 . PF3D7_1239700 138 KDQSPNK|VS 0.058 . PF3D7_1239700 144 KVSPHFK|PI 0.093 . PF3D7_1239700 147 PHFKPIR|FE 0.117 . PF3D7_1239700 158 AGIDESK|LE 0.056 . PF3D7_1239700 169 EVVDFIK|NR 0.063 . PF3D7_1239700 171 VDFIKNR|EK 0.094 . PF3D7_1239700 173 FIKNREK|YH 0.072 . PF3D7_1239700 180 YHEMGAR|MP 0.099 . PF3D7_1239700 183 MGARMPK|GV 0.233 . PF3D7_1239700 195 GPPGSGK|TM 0.056 . PF3D7_1239700 200 GKTMLAR|AV 0.144 . PF3D7_1239700 228 YVGQGAK|RI 0.065 . PF3D7_1239700 229 VGQGAKR|IR 0.110 . PF3D7_1239700 231 QGAKRIR|QL 0.122 . PF3D7_1239700 238 QLFAHAR|SV 0.260 . PF3D7_1239700 256 IDAIGGK|RS 0.064 . PF3D7_1239700 257 DAIGGKR|SS 0.284 . PF3D7_1239700 268 VNGAGQR|EH 0.097 . PF3D7_1239700 298 VIGATNR|ID 0.065 . PF3D7_1239700 308 LDSALLR|PG 0.076 . PF3D7_1239700 311 ALLRPGR|FD 0.201 . PF3D7_1239700 314 RPGRFDR|IV 0.492 . PF3D7_1239700 326 LPDINGR|KK 0.078 . PF3D7_1239700 327 PDINGRK|KI 0.071 . PF3D7_1239700 328 DINGRKK|IL 0.123 . PF3D7_1239700 335 ILEIYIK|KI 0.061 . PF3D7_1239700 336 LEIYIKK|IK 0.084 . PF3D7_1239700 338 IYIKKIK|SD 0.081 . PF3D7_1239700 342 KIKSDLK|LE 0.057 . PF3D7_1239700 348 KLEDIEK|IA 0.059 . PF3D7_1239700 351 DIEKIAR|LT 0.070 . PF3D7_1239700 374 ATILATR|NN 0.065 . PF3D7_1239700 377 LATRNNK|SL 0.157 . PF3D7_1239700 389 NELYEAR|DK 0.092 . PF3D7_1239700 391 LYEARDK|VS 0.056 . PF3D7_1239700 398 VSMGPER|KS 0.080 . PF3D7_1239700 399 SMGPERK|SL 0.185 . PF3D7_1239700 402 PERKSLR|QS 0.140 . PF3D7_1239700 408 RQSDHQR|RI 0.131 . PF3D7_1239700 409 QSDHQRR|IT 0.172 . PF3D7_1239700 428 AYFLQPK|TD 0.059 . PF3D7_1239700 434 KTDPIHK|AT 0.066 . PF3D7_1239700 440 KATIISR|GN 0.083 . PF3D7_1239700 455 QIPVDDR|HN 0.077 . PF3D7_1239700 460 DRHNYFK|SQ 0.101 . PF3D7_1239700 466 KSQMEAK|LA 0.077 . PF3D7_1239700 474 AVCMGGR|TA 0.105 . PF3D7_1239700 483 EEIVFGK|SE 0.082 . PF3D7_1239700 496 ASSDISR|AT 0.164 . PF3D7_1239700 503 ATEIAYK|MV 0.076 . PF3D7_1239700 513 EWGMSDK|LG 0.056 . PF3D7_1239700 520 LGPLNYK|KR 0.056 . PF3D7_1239700 521 GPLNYKK|RM 0.117 . PF3D7_1239700 522 PLNYKKR|MG 0.228 . PF3D7_1239700 531 DGYSSNR|LS 0.075 . PF3D7_1239700 545 SIEVEVK|SL 0.091 . PF3D7_1239700 550 VKSLVEK|GK 0.083 . PF3D7_1239700 552 SLVEKGK|SL 0.116 . PF3D7_1239700 560 LSEEILR|RH 0.081 . PF3D7_1239700 561 SEEILRR|HR 0.099 . PF3D7_1239700 563 EILRRHR|KE 0.129 . PF3D7_1239700 564 ILRRHRK|EL 0.351 . PF3D7_1239700 576 AFALLDK|ET 0.062 . PF3D7_1239700 585 LSGEEIK|NI 0.072 . PF3D7_1239700 594 IDPNNSK|NY 0.067 . PF3D7_1239700 599 SKNYSGK|VE 0.077 . PF3D7_1239700 604 GKVEMLK|ND 0.060 . PF3D7_1239700 608 MLKNDTK|KN 0.068 . PF3D7_1239700 609 LKNDTKK|NE 0.116 . PF3D7_1239700 612 DTKKNEK|KS 0.057 . PF3D7_1239700 613 TKKNEKK|SN 0.207 . PF3D7_1239700 619 KSNSVSK|NK 0.091 . PF3D7_1239700 621 NSVSKNK|ST 0.086 . PF3D7_1239700 630 ISEDYDK|NQ 0.064 . PF3D7_1239700 648 HDHTLVK|NE 0.069 . PF3D7_1239700 657 ENLNNMK|ND 0.060 . PF3D7_1239700 666 IDDNNTR|DG 0.086 . PF3D7_1239700 677 NSDSFVK|RK 0.059 . PF3D7_1239700 678 SDSFVKR|KE 0.231 . PF3D7_1239700 679 DSFVKRK|EV 0.169 . PF3D7_1239700 689 DQDINGK|EL 0.064 . PF3D7_1239700 697 LSEMDNK|EI 0.059 . PF3D7_1239700 700 MDNKEIK|EN 0.066 . PF3D7_1239700 703 KEIKENK|KL 0.075 . PF3D7_1239700 704 EIKENKK|LD 0.101 . PF3D7_1239700 712 DGEELNK|II 0.063 . PF3D7_1239700 719 IIIDNDK|MG 0.061 . PF3D7_1239700 724 DKMGDMK|KN 0.064 . PF3D7_1239700 725 KMGDMKK|NI 0.118 . PF3D7_1239700 728 DMKKNIK|EV 0.074 . PF3D7_1239700 732 NIKEVIK|KM 0.063 . PF3D7_1239700 733 IKEVIKK|MK 0.115 . PF3D7_1239700 735 EVIKKMK|KK 0.068 . PF3D7_1239700 736 VIKKMKK|KQ 0.089 . PF3D7_1239700 737 IKKMKKK|QS 0.169 . PF3D7_1239700 740 MKKKQSK|GS 0.080 . PF3D7_1239700 744 QSKGSYK|TY 0.077 . PF3D7_1239700 747 GSYKTYK|NV 0.097 . PF3D7_1239700 751 TYKNVLK|SV 0.122 . PF3D7_1239700 757 KSVSEHK|EL 0.068 . PF3D7_1239700 760 SEHKELK|TQ 0.064 . PF3D7_1239700 763 KELKTQK|KA 0.069 . PF3D7_1239700 764 ELKTQKK|AD 0.129 . PF3D7_1239700 769 KKADENK|IV 0.084 . PF3D7_1239700 777 VADNNEK|SS 0.068 . PF3D7_1239700 785 SNNSLDK|NN 0.070 . PF3D7_1239700 795 QGSIDEK|GY 0.067 . PF3D7_1239700 798 IDEKGYK|NN 0.061 . PF3D7_1239700 809 NNNNMVK|NI 0.071 . PF3D7_1239700 823 ENFPEYK|KY 0.065 . PF3D7_1239700 824 NFPEYKK|YD 0.084 . PF3D7_1239700 834 ENNDFVK|TK 0.076 . PF3D7_1239700 836 NDFVKTK|EN 0.069 . PF3D7_1239700 853 IDISHIK|NV 0.081 . PF3D7_1239700 859 KNVDEMK|KF 0.072 . PF3D7_1239700 860 NVDEMKK|FN 0.085 . PF3D7_1239700 870 FEHNLNK|LF 0.055 . PF3D7_1239700 878 FLFDIFK|SD 0.071 . ____________________________^_________________

  • Fasta :-

    >PF3D7_1239700 ATGAGTTCGAAGTATGACAATCAGAGTTTTCTGTCAACAGGATCAGATAAATATGGTGAA CAAGAAAATTCTGTTTTATTGCATGATGAGGAAGATGAATATATAAATGAGAATAAAAAG AAGAGAAATGAACGTGATAAGAAATTTCGATATTATGAAAATTTTTTTAATAGAAGGAGA AGTAAAAAGTGGAATTATTTCATAATATTTTTTTTAGGTGTATGTTTAGGTTTTGCCATA TGGCCATTTTTTATGACTATAATAACGTATAGATTATTTTATAAAGATAATTTTAATAAT ACAAATTATCGAACAAATAATTCTTCCACTTCTTTGAAATCTTATGGAAATGAGAAAAAT AAGAAGAGTGATAACAATGGAAAAGTACCCATGAAAGATCAATCTCCAAATAAAGTATCT CCACATTTTAAACCTATACGATTTGAAGAAATAGCAGGAATAGATGAATCTAAATTAGAA TTATTAGAAGTAGTTGATTTTATAAAAAATAGAGAAAAGTATCATGAAATGGGTGCTAGA ATGCCAAAGGGTGTTTTATTAGTTGGACCTCCGGGTTCAGGAAAAACCATGTTAGCTAGA GCTGTAGCAACTGAAGCTAATGTTCCATATATTTATACTTCTGGACCAGAATTTATAGAA ATATATGTAGGTCAAGGGGCTAAAAGAATACGGCAGTTATTTGCTCATGCAAGATCAGTT GCTCCATCCATTGTATTTATTGATGAAATTGATGCAATTGGTGGAAAGAGAAGTTCAGGA TCTGTTAACGGTGCAGGTCAAAGAGAACATGATCAAACATTAAATCAATTGTTAGTTGAA ATGGATGGATTTAGTAATACTGTACATATTATGGTTATAGGTGCGACAAACAGAATTGAT ACCTTAGACAGTGCTTTATTACGACCAGGTAGATTTGATAGGATCGTTTATGTACCATTA CCCGATATTAATGGAAGAAAGAAAATTTTAGAAATATATATTAAAAAAATTAAGAGTGAT TTAAAATTAGAAGATATTGAAAAGATAGCAAGATTAACACCTGGGTTTTCTGGTGCAGAT TTAGAAAATGTTGTAAATGAGGCTACTATTTTAGCTACAAGAAATAATAAAAGTTTAGTT ACAATTAATGAATTATATGAAGCCAGAGATAAAGTTTCTATGGGCCCAGAAAGAAAATCA TTAAGACAATCAGACCATCAAAGAAGGATAACAGCTTATCATGAAGCTGGTCATGCTATC GTTGCATATTTTCTTCAACCTAAAACAGATCCAATACATAAGGCTACAATTATTTCAAGA GGTAATGCTCTTGGATATGTTGAACAAATTCCAGTTGATGATAGACATAATTATTTTAAG AGTCAAATGGAAGCAAAATTAGCTGTTTGTATGGGAGGTAGAACAGCTGAAGAAATTGTT TTTGGTAAATCAGAAACTAGTAGTGGTGCTTCAAGTGATATATCTAGAGCTACCGAAATT GCTTATAAAATGGTAACGGAATGGGGTATGTCTGATAAATTAGGACCATTAAATTATAAA AAAAGAATGGGAGATGGTTATTCGTCCAATCGATTATCTGCTCAAACTGTTTCATCTATA GAAGTCGAAGTAAAGTCCTTAGTAGAAAAAGGAAAAAGCTTATCAGAAGAAATATTAAGA AGACATAGAAAAGAATTAGATAATTTAGCTTTTGCATTATTAGATAAAGAAACCTTATCC GGAGAAGAGATCAAAAATATTATTGATCCAAATAATTCCAAAAATTATTCAGGTAAGGTA GAAATGTTAAAAAATGATACAAAGAAAAATGAGAAAAAGAGTAACAGTGTATCTAAAAAT AAAAGCACCATTTCTGAGGATTATGACAAAAATCAAAATAATGTGGAACAAAATTACCAA TCACATGATCATACCTTAGTTAAAAATGAAGAAAATTTGAATAATATGAAAAATGATATT GATGACAATAATACGAGAGATGGTCAAGTAAATTCAGACTCATTTGTAAAAAGAAAAGAA GTAACGGATCAGGATATAAATGGAAAAGAATTAAGTGAGATGGATAATAAAGAGATAAAA GAAAATAAAAAGTTAGATGGAGAGGAATTAAATAAAATTATTATTGATAACGATAAAATG GGTGATATGAAAAAGAATATAAAAGAAGTTATTAAAAAAATGAAAAAAAAACAATCTAAA GGTTCTTACAAGACATATAAAAATGTATTGAAATCTGTAAGTGAACACAAGGAATTGAAA ACTCAGAAGAAAGCGGATGAAAATAAAATCGTGGCTGATAATAATGAGAAGTCATCTAAT AATAGCTTGGATAAAAATAATACACAAGGTTCAATAGATGAAAAGGGATATAAAAATAAT AATAATAATAATAATAATATGGTGAAAAATATCAATGAATTGTTTGAAGAGAATTTTCCT GAATATAAGAAATATGATAATGAAAATAACGATTTTGTAAAAACCAAAGAAAATTACTTT GACAATTTTAATGAAGTAATAGATATATCTCATATAAAAAATGTTGATGAAATGAAAAAG TTTAATATATTTGAACATAACTTAAATAAATTATTTTTATTTGACATATTTAAAAGCGAC TAG
  • Download Fasta

  • Fasta :-

    MSSKYDNQSFLSTGSDKYGEQENSVLLHDEEDEYINENKKKRNERDKKFRYYENFFNRRR SKKWNYFIIFFLGVCLGFAIWPFFMTIITYRLFYKDNFNNTNYRTNNSSTSLKSYGNEKN KKSDNNGKVPMKDQSPNKVSPHFKPIRFEEIAGIDESKLELLEVVDFIKNREKYHEMGAR MPKGVLLVGPPGSGKTMLARAVATEANVPYIYTSGPEFIEIYVGQGAKRIRQLFAHARSV APSIVFIDEIDAIGGKRSSGSVNGAGQREHDQTLNQLLVEMDGFSNTVHIMVIGATNRID TLDSALLRPGRFDRIVYVPLPDINGRKKILEIYIKKIKSDLKLEDIEKIARLTPGFSGAD LENVVNEATILATRNNKSLVTINELYEARDKVSMGPERKSLRQSDHQRRITAYHEAGHAI VAYFLQPKTDPIHKATIISRGNALGYVEQIPVDDRHNYFKSQMEAKLAVCMGGRTAEEIV FGKSETSSGASSDISRATEIAYKMVTEWGMSDKLGPLNYKKRMGDGYSSNRLSAQTVSSI EVEVKSLVEKGKSLSEEILRRHRKELDNLAFALLDKETLSGEEIKNIIDPNNSKNYSGKV EMLKNDTKKNEKKSNSVSKNKSTISEDYDKNQNNVEQNYQSHDHTLVKNEENLNNMKNDI DDNNTRDGQVNSDSFVKRKEVTDQDINGKELSEMDNKEIKENKKLDGEELNKIIIDNDKM GDMKKNIKEVIKKMKKKQSKGSYKTYKNVLKSVSEHKELKTQKKADENKIVADNNEKSSN NSLDKNNTQGSIDEKGYKNNNNNNNNMVKNINELFEENFPEYKKYDNENNDFVKTKENYF DNFNEVIDISHIKNVDEMKKFNIFEHNLNKLFLFDIFKSD

  • title: ATP binding site
  • coordinates: P190,P191,G192,S193,G194,K195,T196,M197,D248,N297
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PF3D7_1239700400 SPERKSLRQS0.997unspPF3D7_1239700400 SPERKSLRQS0.997unspPF3D7_1239700400 SPERKSLRQS0.997unspPF3D7_1239700580 SKETLSGEEI0.997unspPF3D7_1239700742 SQSKGSYKTY0.995unspPF3D7_1239700752 SNVLKSVSEH0.997unspPF3D7_123970034 YEEDEYINEN0.993unspPF3D7_123970061 SNRRRSKKWN0.998unsp

2277.t00385      MAL12P1.383      PFL1925w      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India