PF3D7_1240000 | 3-hydroxyisobutyryl-CoA hydrolase, putative

_IDPredictionOTHERSPmTPCS_Position
PF3D7_1240000OTHER0.9662210.0000030.033776
No Results

  • Fasta :-

    >PF3D7_1240000 MLKFNCIPYKNIGTFHDALKQHNIKFEKRNNFIFFHAFSSLRKYKSQHSEKNNILNKLFF FKKEYKSYFHKLSNNLFLSSKRKNEVIFHKMDKTNKNVQMIKHNIITSQRRENGMEQYTA IDGKTKVNNNNNNDNSNNNNDNSNNNKNNNNDMKANIHHDMDKVKNNMIDLELSELWTKK SLIVNFQNNICEIILNRPEKLNAINKDMINALLNIIKSLDNDERCFMVIIRSTNSNCFSS GSDVKYVVENKEQGIQHLKQLYLYINYISQMKKNLLCIWNGYVMGGGLGISIYSKYKVIN KNAIFAMPENKIGFFPDIGCCYFFRKYFGRNIGLHLGLTSLRLNEVDLINFNVCNNYIEN VDTFMDNLNNIKATNQEDFNKKLNNLLTNKYVSKMSYNKSNNPVLTDELINNINTYYSSA NTLEDLITKLKKDNNDFCKKLLSDIYSNCYFSCMFWFSYYLYNYEKSLEEVLNNDFKITQ YFLFHKNSFERGVTEVLVKKNKNFQWSKDEETNNADFEDIDDILMNKNLLSIKEEFTNMS E
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_1240000.fa Sequence name : PF3D7_1240000 Sequence length : 541 VALUES OF COMPUTED PARAMETERS Coef20 : 3.483 CoefTot : -1.271 ChDiff : 13 ZoneTo : 16 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.465 1.247 0.250 0.644 MesoH : -0.356 0.371 -0.309 0.272 MuHd_075 : 2.809 7.560 0.738 1.915 MuHd_095 : 17.434 7.463 1.885 3.721 MuHd_100 : 25.919 10.777 4.123 5.151 MuHd_105 : 26.854 12.323 5.324 5.366 Hmax_075 : 7.700 6.125 -0.077 3.068 Hmax_095 : 5.900 6.300 -1.832 4.140 Hmax_100 : 10.500 8.700 -0.211 4.400 Hmax_105 : 10.237 7.000 1.149 3.940 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7675 0.2325 DFMC : 0.8741 0.1259
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 541 PF3D7_1240000 MLKFNCIPYKNIGTFHDALKQHNIKFEKRNNFIFFHAFSSLRKYKSQHSEKNNILNKLFFFKKEYKSYFHKLSNNLFLSS 80 KRKNEVIFHKMDKTNKNVQMIKHNIITSQRRENGMEQYTAIDGKTKVNNNNNNDNSNNNNDNSNNNKNNNNDMKANIHHD 160 MDKVKNNMIDLELSELWTKKSLIVNFQNNICEIILNRPEKLNAINKDMINALLNIIKSLDNDERCFMVIIRSTNSNCFSS 240 GSDVKYVVENKEQGIQHLKQLYLYINYISQMKKNLLCIWNGYVMGGGLGISIYSKYKVINKNAIFAMPENKIGFFPDIGC 320 CYFFRKYFGRNIGLHLGLTSLRLNEVDLINFNVCNNYIENVDTFMDNLNNIKATNQEDFNKKLNNLLTNKYVSKMSYNKS 400 NNPVLTDELINNINTYYSSANTLEDLITKLKKDNNDFCKKLLSDIYSNCYFSCMFWFSYYLYNYEKSLEEVLNNDFKITQ 480 YFLFHKNSFERGVTEVLVKKNKNFQWSKDEETNNADFEDIDDILMNKNLLSIKEEFTNMSE 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ............................................................. 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_1240000 3 ----MLK|FN 0.063 . PF3D7_1240000 10 FNCIPYK|NI 0.085 . PF3D7_1240000 20 TFHDALK|QH 0.064 . PF3D7_1240000 25 LKQHNIK|FE 0.066 . PF3D7_1240000 28 HNIKFEK|RN 0.066 . PF3D7_1240000 29 NIKFEKR|NN 0.192 . PF3D7_1240000 42 HAFSSLR|KY 0.077 . PF3D7_1240000 43 AFSSLRK|YK 0.098 . PF3D7_1240000 45 SSLRKYK|SQ 0.261 . PF3D7_1240000 51 KSQHSEK|NN 0.064 . PF3D7_1240000 57 KNNILNK|LF 0.062 . PF3D7_1240000 62 NKLFFFK|KE 0.065 . PF3D7_1240000 63 KLFFFKK|EY 0.099 . PF3D7_1240000 66 FFKKEYK|SY 0.085 . PF3D7_1240000 71 YKSYFHK|LS 0.069 . PF3D7_1240000 81 NLFLSSK|RK 0.062 . PF3D7_1240000 82 LFLSSKR|KN 0.165 . PF3D7_1240000 83 FLSSKRK|NE 0.083 . PF3D7_1240000 90 NEVIFHK|MD 0.064 . PF3D7_1240000 93 IFHKMDK|TN 0.068 . PF3D7_1240000 96 KMDKTNK|NV 0.078 . PF3D7_1240000 102 KNVQMIK|HN 0.060 . PF3D7_1240000 110 NIITSQR|RE 0.077 . PF3D7_1240000 111 IITSQRR|EN 0.168 . PF3D7_1240000 124 YTAIDGK|TK 0.059 . PF3D7_1240000 126 AIDGKTK|VN 0.060 . PF3D7_1240000 147 DNSNNNK|NN 0.068 . PF3D7_1240000 154 NNNNDMK|AN 0.080 . PF3D7_1240000 163 IHHDMDK|VK 0.065 . PF3D7_1240000 165 HDMDKVK|NN 0.075 . PF3D7_1240000 179 LSELWTK|KS 0.058 . PF3D7_1240000 180 SELWTKK|SL 0.154 . PF3D7_1240000 197 CEIILNR|PE 0.062 . PF3D7_1240000 200 ILNRPEK|LN 0.155 . PF3D7_1240000 206 KLNAINK|DM 0.078 . PF3D7_1240000 217 ALLNIIK|SL 0.088 . PF3D7_1240000 224 SLDNDER|CF 0.099 . PF3D7_1240000 231 CFMVIIR|ST 0.122 . PF3D7_1240000 245 SSGSDVK|YV 0.083 . PF3D7_1240000 251 KYVVENK|EQ 0.064 . PF3D7_1240000 259 QGIQHLK|QL 0.065 . PF3D7_1240000 272 NYISQMK|KN 0.055 . PF3D7_1240000 273 YISQMKK|NL 0.120 . PF3D7_1240000 295 GISIYSK|YK 0.068 . PF3D7_1240000 297 SIYSKYK|VI 0.064 . PF3D7_1240000 301 KYKVINK|NA 0.067 . PF3D7_1240000 311 FAMPENK|IG 0.055 . PF3D7_1240000 325 GCCYFFR|KY 0.089 . PF3D7_1240000 326 CCYFFRK|YF 0.118 . PF3D7_1240000 330 FRKYFGR|NI 0.148 . PF3D7_1240000 342 LGLTSLR|LN 0.077 . PF3D7_1240000 372 DNLNNIK|AT 0.064 . PF3D7_1240000 381 NQEDFNK|KL 0.068 . PF3D7_1240000 382 QEDFNKK|LN 0.073 . PF3D7_1240000 390 NNLLTNK|YV 0.073 . PF3D7_1240000 394 TNKYVSK|MS 0.070 . PF3D7_1240000 399 SKMSYNK|SN 0.099 . PF3D7_1240000 429 LEDLITK|LK 0.055 . PF3D7_1240000 431 DLITKLK|KD 0.055 . PF3D7_1240000 432 LITKLKK|DN 0.106 . PF3D7_1240000 439 DNNDFCK|KL 0.067 . PF3D7_1240000 440 NNDFCKK|LL 0.107 . PF3D7_1240000 466 YLYNYEK|SL 0.095 . PF3D7_1240000 477 VLNNDFK|IT 0.070 . PF3D7_1240000 486 QYFLFHK|NS 0.063 . PF3D7_1240000 491 HKNSFER|GV 0.210 . PF3D7_1240000 499 VTEVLVK|KN 0.057 . PF3D7_1240000 500 TEVLVKK|NK 0.079 . PF3D7_1240000 502 VLVKKNK|NF 0.065 . PF3D7_1240000 508 KNFQWSK|DE 0.078 . PF3D7_1240000 527 DDILMNK|NL 0.056 . PF3D7_1240000 533 KNLLSIK|EE 0.060 . ____________________________^_________________

  • Fasta :-

    >PF3D7_1240000 ATGTTAAAGTTTAATTGCATACCTTATAAAAATATAGGAACCTTTCATGATGCCCTTAAG CAGCATAATATAAAATTTGAAAAAAGAAACAATTTTATTTTTTTTCATGCTTTTTCATCT TTACGTAAATATAAATCACAACATTCTGAAAAGAATAATATTTTGAATAAATTATTTTTT TTTAAAAAAGAATACAAAAGTTACTTCCACAAACTTTCCAATAATTTGTTCTTGTCTAGT AAGAGAAAAAATGAAGTAATATTTCATAAAATGGATAAGACGAATAAAAATGTTCAAATG ATTAAACATAATATTATAACTAGCCAAAGAAGAGAAAATGGGATGGAACAATATACTGCT ATAGATGGTAAAACCAAAGTAAACAACAACAATAATAATGATAATAGTAATAACAATAAT GATAATAGTAATAACAATAAAAATAATAATAATGATATGAAAGCAAATATTCATCATGAT ATGGATAAAGTAAAAAATAATATGATCGATTTAGAACTATCAGAATTATGGACTAAAAAA TCATTAATTGTTAATTTTCAAAATAATATATGTGAAATAATTTTAAATAGGCCCGAAAAA TTAAATGCAATAAATAAGGATATGATAAATGCATTATTAAATATAATAAAAAGTTTAGAT AATGATGAAAGATGTTTTATGGTAATAATTCGAAGTACTAACAGCAACTGTTTTTCATCA GGCTCAGATGTAAAATATGTTGTTGAAAATAAAGAACAAGGTATACAACATTTAAAACAG CTATATTTGTATATTAATTATATATCCCAAATGAAAAAAAATTTACTATGTATATGGAAT GGATATGTTATGGGAGGTGGTCTAGGAATTTCTATTTATTCAAAATATAAAGTAATAAAT AAAAACGCTATATTTGCCATGCCTGAAAATAAAATAGGTTTTTTCCCTGATATTGGATGT TGTTATTTTTTCAGAAAATATTTTGGAAGAAATATAGGTTTACATTTAGGTTTAACATCA TTAAGATTAAATGAGGTGGATTTGATTAATTTTAATGTGTGTAATAATTATATTGAAAAT GTTGATACTTTTATGGATAATTTGAATAATATAAAAGCAACAAATCAAGAAGATTTCAAT AAGAAATTAAATAATTTATTAACAAATAAATATGTTTCAAAAATGTCTTATAATAAGTCT AATAATCCAGTCTTAACAGATGAGTTAATTAATAATATTAATACATATTATAGTAGTGCA AATACCTTGGAAGATTTAATAACCAAATTAAAAAAAGATAACAACGATTTCTGTAAAAAG TTATTATCTGATATTTATTCTAATTGCTATTTTAGTTGTATGTTCTGGTTTTCTTATTAT TTATATAATTATGAAAAATCATTAGAAGAGGTATTAAATAATGATTTCAAAATTACTCAA TATTTTCTGTTTCATAAAAATTCTTTTGAAAGGGGTGTAACAGAAGTATTGGTGAAAAAA AATAAAAACTTTCAATGGAGCAAAGACGAAGAAACAAATAATGCCGACTTTGAAGATATT GACGATATTTTGATGAACAAAAATTTGTTGTCAATAAAGGAAGAGTTTACAAATATGAGT GAATAA
  • Download Fasta

  • Fasta :-

    MLKFNCIPYKNIGTFHDALKQHNIKFEKRNNFIFFHAFSSLRKYKSQHSEKNNILNKLFF FKKEYKSYFHKLSNNLFLSSKRKNEVIFHKMDKTNKNVQMIKHNIITSQRRENGMEQYTA IDGKTKVNNNNNNDNSNNNNDNSNNNKNNNNDMKANIHHDMDKVKNNMIDLELSELWTKK SLIVNFQNNICEIILNRPEKLNAINKDMINALLNIIKSLDNDERCFMVIIRSTNSNCFSS GSDVKYVVENKEQGIQHLKQLYLYINYISQMKKNLLCIWNGYVMGGGLGISIYSKYKVIN KNAIFAMPENKIGFFPDIGCCYFFRKYFGRNIGLHLGLTSLRLNEVDLINFNVCNNYIEN VDTFMDNLNNIKATNQEDFNKKLNNLLTNKYVSKMSYNKSNNPVLTDELINNINTYYSSA NTLEDLITKLKKDNNDFCKKLLSDIYSNCYFSCMFWFSYYLYNYEKSLEEVLNNDFKITQ YFLFHKNSFERGVTEVLVKKNKNFQWSKDEETNNADFEDIDDILMNKNLLSIKEEFTNMS E

  • title: substrate binding site
  • coordinates: L201,A203,N236,S240,G241,S242,D243,V244,Y282,M284,G285,G286,P308,E309,I312
No Results
No Results
IDSitePeptideScoreMethod
PF3D7_124000049 SKSQHSEKNN0.997unsp

2277.t00388      MAL12P1.386      PFL1940w      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India