PF3D7_1319100 | ubiquitin carboxyl-terminal hydrolase MINDY, putative

_IDPredictionOTHERSPmTPCS_Position
PF3D7_1319100OTHER0.9999780.0000160.000006
No Results

  • Fasta :-

    >PF3D7_1319100 MSSLINIHYDENNDEEENLIIKFADYETFKLYVLKKYDKIYKTCNYEKSVINYYSVKWIN FINRKVPILLQNKSGPCPLLCITNILLLRNQLHIDRKVKKISQKVLESKIMNILLESNKK NVTENNSSCNYRKNIIECVEILPQLKYGLDVNCKFTNICSFEYTKGLCIFDMLNIPLYHG WVISSDDIIFYSYLKDYSYNVIINKIVRYNDYYEKKRKKKHLLEITHDEKDIMYELEDIK EEEYTPNFLQDRNKKKEKSKRKSVSPMNKNKTKNKNKNKNNNNNKNNNNNKNNNNNNNNN KNNHHNDINKINKIKFNCKHNKKNYNNNDDDDDDDYDNDHFGDNHNFSYPQFNGSFMKNN NFKKNSYNNYNVPIFPDDLDQTSEDNTITKMLVEDINISDHNLNFNDIKLAKKVSLQHNN THPCNNDFDTNNSSSISNHNNNNNNTHNHNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNSSSSCSNRRAFSTNIVRSSKMINNFCNMLEKKEDNVQSCFFKENNKSNKLSS RIKKSQSFIKKEKNYNKLMLYNDLDAHNNIDAPKFPEDTLTNSNNLITNEYSEKNYEESN IKLNNIDDDNFTNNEFFIESNKIESIINEQGFDNYTDNNTEISENFIMKNYNTEINLTPY EVHEALIISEFLETHKTQLTKVGLKLLHETLNPNQLVAFFRNNHFNTLFKYENKLFILAA DISFLHLSCTWELFDNVENDTSYYDNNFECLANQKTDKKDLNHSIIYSRNFDKSTARNNI YCLRSNATINNNKKKKKKKCTIM
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_1319100.fa Sequence name : PF3D7_1319100 Sequence length : 803 VALUES OF COMPUTED PARAMETERS Coef20 : 2.887 CoefTot : -0.184 ChDiff : 7 ZoneTo : 9 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.300 1.529 0.114 0.607 MesoH : -0.634 0.375 -0.337 0.263 MuHd_075 : 8.665 6.238 2.719 1.596 MuHd_095 : 18.042 10.648 3.233 3.431 MuHd_100 : 16.799 9.831 2.574 3.139 MuHd_105 : 11.112 8.048 0.937 2.398 Hmax_075 : -15.867 -4.083 -5.916 0.350 Hmax_095 : -7.400 -1.300 -5.275 1.480 Hmax_100 : -9.600 -3.500 -5.816 0.480 Hmax_105 : -9.600 -3.500 -6.017 0.320 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9924 0.0076 DFMC : 0.9889 0.0111
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 803 PF3D7_1319100 MSSLINIHYDENNDEEENLIIKFADYETFKLYVLKKYDKIYKTCNYEKSVINYYSVKWINFINRKVPILLQNKSGPCPLL 80 CITNILLLRNQLHIDRKVKKISQKVLESKIMNILLESNKKNVTENNSSCNYRKNIIECVEILPQLKYGLDVNCKFTNICS 160 FEYTKGLCIFDMLNIPLYHGWVISSDDIIFYSYLKDYSYNVIINKIVRYNDYYEKKRKKKHLLEITHDEKDIMYELEDIK 240 EEEYTPNFLQDRNKKKEKSKRKSVSPMNKNKTKNKNKNKNNNNNKNNNNNKNNNNNNNNNKNNHHNDINKINKIKFNCKH 320 NKKNYNNNDDDDDDDYDNDHFGDNHNFSYPQFNGSFMKNNNFKKNSYNNYNVPIFPDDLDQTSEDNTITKMLVEDINISD 400 HNLNFNDIKLAKKVSLQHNNTHPCNNDFDTNNSSSISNHNNNNNNTHNHNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 480 NNNNNNNNSSSSCSNRRAFSTNIVRSSKMINNFCNMLEKKEDNVQSCFFKENNKSNKLSSRIKKSQSFIKKEKNYNKLML 560 YNDLDAHNNIDAPKFPEDTLTNSNNLITNEYSEKNYEESNIKLNNIDDDNFTNNEFFIESNKIESIINEQGFDNYTDNNT 640 EISENFIMKNYNTEINLTPYEVHEALIISEFLETHKTQLTKVGLKLLHETLNPNQLVAFFRNNHFNTLFKYENKLFILAA 720 DISFLHLSCTWELFDNVENDTSYYDNNFECLANQKTDKKDLNHSIIYSRNFDKSTARNNIYCLRSNATINNNKKKKKKKC 800 TIM 880 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ...............................................................P................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ... 880 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PF3D7_1319100 22 EENLIIK|FA 0.072 . PF3D7_1319100 30 ADYETFK|LY 0.055 . PF3D7_1319100 35 FKLYVLK|KY 0.074 . PF3D7_1319100 36 KLYVLKK|YD 0.111 . PF3D7_1319100 39 VLKKYDK|IY 0.058 . PF3D7_1319100 42 KYDKIYK|TC 0.057 . PF3D7_1319100 48 KTCNYEK|SV 0.098 . PF3D7_1319100 57 INYYSVK|WI 0.071 . PF3D7_1319100 64 WINFINR|KV 0.127 . PF3D7_1319100 65 INFINRK|VP 0.064 . PF3D7_1319100 73 PILLQNK|SG 0.058 . PF3D7_1319100 89 TNILLLR|NQ 0.075 . PF3D7_1319100 96 NQLHIDR|KV 0.085 . PF3D7_1319100 97 QLHIDRK|VK 0.084 . PF3D7_1319100 99 HIDRKVK|KI 0.181 . PF3D7_1319100 100 IDRKVKK|IS 0.165 . PF3D7_1319100 104 VKKISQK|VL 0.076 . PF3D7_1319100 109 QKVLESK|IM 0.065 . PF3D7_1319100 119 ILLESNK|KN 0.059 . PF3D7_1319100 120 LLESNKK|NV 0.110 . PF3D7_1319100 132 NSSCNYR|KN 0.112 . PF3D7_1319100 133 SSCNYRK|NI 0.100 . PF3D7_1319100 146 EILPQLK|YG 0.058 . PF3D7_1319100 154 GLDVNCK|FT 0.066 . PF3D7_1319100 165 CSFEYTK|GL 0.062 . PF3D7_1319100 195 IFYSYLK|DY 0.060 . PF3D7_1319100 205 YNVIINK|IV 0.067 . PF3D7_1319100 208 IINKIVR|YN 0.127 . PF3D7_1319100 215 YNDYYEK|KR 0.053 . PF3D7_1319100 216 NDYYEKK|RK 0.097 . PF3D7_1319100 217 DYYEKKR|KK 0.141 . PF3D7_1319100 218 YYEKKRK|KK 0.091 . PF3D7_1319100 219 YEKKRKK|KH 0.083 . PF3D7_1319100 220 EKKRKKK|HL 0.456 . PF3D7_1319100 230 EITHDEK|DI 0.070 . PF3D7_1319100 240 YELEDIK|EE 0.052 . PF3D7_1319100 252 PNFLQDR|NK 0.076 . PF3D7_1319100 254 FLQDRNK|KK 0.069 . PF3D7_1319100 255 LQDRNKK|KE 0.211 . PF3D7_1319100 256 QDRNKKK|EK 0.133 . PF3D7_1319100 258 RNKKKEK|SK 0.114 . PF3D7_1319100 260 KKKEKSK|RK 0.076 . PF3D7_1319100 261 KKEKSKR|KS 0.156 . PF3D7_1319100 262 KEKSKRK|SV 0.277 . PF3D7_1319100 269 SVSPMNK|NK 0.068 . PF3D7_1319100 271 SPMNKNK|TK 0.071 . PF3D7_1319100 273 MNKNKTK|NK 0.074 . PF3D7_1319100 275 KNKTKNK|NK 0.069 . PF3D7_1319100 277 KTKNKNK|NK 0.062 . PF3D7_1319100 279 KNKNKNK|NN 0.069 . PF3D7_1319100 285 KNNNNNK|NN 0.066 . PF3D7_1319100 291 KNNNNNK|NN 0.069 . PF3D7_1319100 301 NNNNNNK|NN 0.069 . PF3D7_1319100 310 HHNDINK|IN 0.070 . PF3D7_1319100 313 DINKINK|IK 0.067 . PF3D7_1319100 315 NKINKIK|FN 0.075 . PF3D7_1319100 319 KIKFNCK|HN 0.066 . PF3D7_1319100 322 FNCKHNK|KN 0.070 . PF3D7_1319100 323 NCKHNKK|NY 0.085 . PF3D7_1319100 358 FNGSFMK|NN 0.066 . PF3D7_1319100 363 MKNNNFK|KN 0.076 . PF3D7_1319100 364 KNNNFKK|NS 0.120 . PF3D7_1319100 390 EDNTITK|ML 0.067 . PF3D7_1319100 409 LNFNDIK|LA 0.070 . PF3D7_1319100 412 NDIKLAK|KV 0.088 . PF3D7_1319100 413 DIKLAKK|VS 0.085 . PF3D7_1319100 496 SSSCSNR|RA 0.126 . PF3D7_1319100 497 SSCSNRR|AF 0.173 . PF3D7_1319100 505 FSTNIVR|SS 0.096 . PF3D7_1319100 508 NIVRSSK|MI 0.130 . PF3D7_1319100 519 FCNMLEK|KE 0.066 . PF3D7_1319100 520 CNMLEKK|ED 0.088 . PF3D7_1319100 530 VQSCFFK|EN 0.077 . PF3D7_1319100 534 FFKENNK|SN 0.060 . PF3D7_1319100 537 ENNKSNK|LS 0.082 . PF3D7_1319100 541 SNKLSSR|IK 0.090 . PF3D7_1319100 543 KLSSRIK|KS 0.067 . PF3D7_1319100 544 LSSRIKK|SQ 0.626 *ProP* PF3D7_1319100 550 KSQSFIK|KE 0.063 . PF3D7_1319100 551 SQSFIKK|EK 0.117 . PF3D7_1319100 553 SFIKKEK|NY 0.066 . PF3D7_1319100 557 KEKNYNK|LM 0.055 . PF3D7_1319100 574 NNIDAPK|FP 0.081 . PF3D7_1319100 594 TNEYSEK|NY 0.068 . PF3D7_1319100 602 YEESNIK|LN 0.057 . PF3D7_1319100 622 FFIESNK|IE 0.062 . PF3D7_1319100 649 SENFIMK|NY 0.079 . PF3D7_1319100 676 EFLETHK|TQ 0.054 . PF3D7_1319100 681 HKTQLTK|VG 0.061 . PF3D7_1319100 685 LTKVGLK|LL 0.058 . PF3D7_1319100 701 QLVAFFR|NN 0.089 . PF3D7_1319100 710 HFNTLFK|YE 0.064 . PF3D7_1319100 714 LFKYENK|LF 0.058 . PF3D7_1319100 755 ECLANQK|TD 0.058 . PF3D7_1319100 758 ANQKTDK|KD 0.058 . PF3D7_1319100 759 NQKTDKK|DL 0.118 . PF3D7_1319100 769 HSIIYSR|NF 0.093 . PF3D7_1319100 773 YSRNFDK|ST 0.087 . PF3D7_1319100 777 FDKSTAR|NN 0.091 . PF3D7_1319100 784 NNIYCLR|SN 0.118 . PF3D7_1319100 793 ATINNNK|KK 0.059 . PF3D7_1319100 794 TINNNKK|KK 0.113 . PF3D7_1319100 795 INNNKKK|KK 0.161 . PF3D7_1319100 796 NNNKKKK|KK 0.127 . PF3D7_1319100 797 NNKKKKK|KK 0.151 . PF3D7_1319100 798 NKKKKKK|KC 0.130 . PF3D7_1319100 799 KKKKKKK|CT 0.171 . ____________________________^_________________

  • Fasta :-

    >PF3D7_1319100 ATGTCTTCATTGATAAATATACACTATGATGAAAATAATGACGAAGAGGAGAATTTGATT ATAAAATTTGCTGACTATGAAACATTTAAATTATATGTTTTAAAAAAATATGATAAGATA TATAAGACTTGTAATTATGAGAAATCGGTTATAAATTATTATAGTGTAAAATGGATAAAT TTTATTAATCGTAAGGTTCCCATTTTGTTACAAAACAAAAGTGGTCCATGTCCTCTTTTA TGTATAACAAATATATTATTATTACGAAATCAATTACATATAGATAGAAAGGTTAAGAAG ATATCTCAAAAAGTATTAGAAAGTAAAATTATGAATATATTATTAGAATCAAATAAAAAA AATGTTACAGAAAATAATTCTTCATGTAATTATAGAAAAAATATTATAGAATGTGTTGAA ATATTACCACAATTAAAATATGGATTAGATGTTAATTGTAAATTTACAAATATTTGTTCT TTTGAATATACCAAAGGTTTATGTATTTTTGATATGTTAAATATTCCACTATATCATGGA TGGGTTATTTCGTCAGATGATATTATTTTTTATTCTTATTTAAAAGATTATTCGTATAAT GTTATTATCAATAAAATTGTTAGATATAATGATTACTATGAAAAAAAAAGGAAAAAAAAA CATCTTCTAGAAATAACACATGATGAGAAAGATATTATGTACGAACTCGAGGACATAAAG GAGGAGGAATATACACCAAATTTTTTACAAGATCGAAATAAAAAAAAGGAAAAATCAAAA AGGAAAAGTGTATCTCCAATGAATAAAAATAAAACGAAAAATAAAAACAAAAACAAAAAT AATAACAATAACAAAAATAATAACAATAACAAAAATAATAACAATAATAATAATAATAAT AAAAATAATCACCATAATGATATTAATAAGATTAATAAGATTAAGTTTAATTGTAAGCAT AATAAAAAAAATTATAATAATAATGACGATGATGATGATGATGATTATGATAACGACCAT TTTGGTGATAATCATAATTTCAGCTATCCTCAATTTAACGGTAGCTTTATGAAAAATAAT AATTTTAAAAAAAATAGCTATAATAATTATAATGTACCTATTTTTCCAGACGATTTAGAT CAAACATCGGAAGATAACACAATAACTAAAATGTTAGTAGAAGATATAAATATAAGTGAT CATAATTTAAATTTTAATGATATCAAATTAGCAAAAAAAGTAAGTCTTCAACATAATAAT ACACACCCATGTAATAATGATTTTGATACTAATAATAGTAGTAGCATTAGTAATCATAAT AATAATAATAATAATACTCATAACCACAACAATAATAATAATAACAATAATAATAATAAC AATAATAATAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAAC AACAACAACAACAACAATAATAATAGTAGTAGTAGTTGTAGTAATAGAAGAGCGTTCAGT ACCAATATTGTCAGATCCTCCAAAATGATTAATAATTTTTGTAATATGCTTGAAAAAAAA GAAGATAATGTACAATCATGTTTTTTCAAAGAAAATAATAAATCAAATAAATTGTCTTCT CGTATAAAAAAATCACAATCATTTATTAAAAAAGAAAAAAATTATAACAAATTAATGTTA TATAACGATCTAGATGCTCATAATAATATAGATGCTCCAAAATTCCCAGAAGACACATTA ACCAATTCTAATAATCTTATTACAAATGAATACTCAGAAAAAAATTATGAAGAAAGTAAT ATTAAATTAAATAATATTGATGATGATAATTTTACAAACAATGAATTTTTTATAGAATCG AATAAAATCGAAAGTATCATAAATGAACAAGGATTTGATAATTATACAGATAATAATACA GAAATAAGTGAAAATTTTATTATGAAAAATTATAATACTGAAATCAATCTAACACCATAT GAAGTACATGAAGCATTAATTATATCAGAATTTCTTGAAACACATAAAACACAATTAACA AAAGTAGGATTAAAGCTATTACATGAAACTCTAAATCCAAATCAACTAGTTGCATTCTTT AGAAATAATCATTTTAATACACTCTTCAAATATGAAAATAAACTCTTCATTCTAGCTGCT GATATATCCTTTCTACATCTAAGCTGTACATGGGAACTTTTTGATAATGTAGAAAATGAT ACTTCTTATTATGATAACAATTTTGAATGCTTAGCAAACCAAAAAACAGATAAAAAAGAT CTTAACCATTCAATCATATATTCTAGAAATTTCGACAAAAGCACGGCAAGAAACAATATT TATTGTTTAAGGTCTAATGCTACCATCAATAATAATAAAAAAAAAAAAAAAAAAAAATGT ACTATCATGTAA
  • Download Fasta

  • Fasta :-

    MSSLINIHYDENNDEEENLIIKFADYETFKLYVLKKYDKIYKTCNYEKSVINYYSVKWIN FINRKVPILLQNKSGPCPLLCITNILLLRNQLHIDRKVKKISQKVLESKIMNILLESNKK NVTENNSSCNYRKNIIECVEILPQLKYGLDVNCKFTNICSFEYTKGLCIFDMLNIPLYHG WVISSDDIIFYSYLKDYSYNVIINKIVRYNDYYEKKRKKKHLLEITHDEKDIMYELEDIK EEEYTPNFLQDRNKKKEKSKRKSVSPMNKNKTKNKNKNKNNNNNKNNNNNKNNNNNNNNN KNNHHNDINKINKIKFNCKHNKKNYNNNDDDDDDDYDNDHFGDNHNFSYPQFNGSFMKNN NFKKNSYNNYNVPIFPDDLDQTSEDNTITKMLVEDINISDHNLNFNDIKLAKKVSLQHNN THPCNNDFDTNNSSSISNHNNNNNNTHNHNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNSSSSCSNRRAFSTNIVRSSKMINNFCNMLEKKEDNVQSCFFKENNKSNKLSS RIKKSQSFIKKEKNYNKLMLYNDLDAHNNIDAPKFPEDTLTNSNNLITNEYSEKNYEESN IKLNNIDDDNFTNNEFFIESNKIESIINEQGFDNYTDNNTEISENFIMKNYNTEINLTPY EVHEALIISEFLETHKTQLTKVGLKLLHETLNPNQLVAFFRNNHFNTLFKYENKLFILAA DISFLHLSCTWELFDNVENDTSYYDNNFECLANQKTDKKDLNHSIIYSRNFDKSTARNNI YCLRSNATINNNKKKKKKKCTIM

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PF3D7_1319100263 SSKRKSVSPM0.994unspPF3D7_1319100263 SSKRKSVSPM0.994unspPF3D7_1319100263 SSKRKSVSPM0.994unspPF3D7_1319100102 SVKKISQKVL0.993unspPF3D7_1319100259 SKKEKSKRKS0.996unsp

PF13_0106      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India