PF3D7_1411200 | rhomboid protease ROM8

  • Computed_GO_Component_IDs:  GO:0016021      

  • Computed_GO_Components:  integral component of membrane      

  • Computed_GO_Function_IDs:  GO:0004252      

  • Computed_GO_Functions:  serine-type endopeptidase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PF3D7_1411200OTHER0.9997920.0000460.000162
No Results

  • Fasta :-

    >PF3D7_1411200 MVKKKTSVNVKSILETKNKREKKDEDDDEDNKTNKLYNNLYKRNKSIRINILDKNENNGE GISLSSEKQKVSFKKKNNNYDINESDGVGDYGDDECEEESEIENEDIINNKNNTNNINNI NITNNINNTNNFDNTNNIDNTNNIGNTNNIQINNILERNSKEKSLYKEELTTNIQNGENN TVQFFNFKKYDYNPDRKKTRDDLNDDNENSCSSFTRRGKYNKTKTIKKSNKLKLTNTHEN LLSDHHDYTSLKVNYKINKKSNYDKTKKRPFLSITFNEKQNRPVNRSSVCTDNAKFLSFL NDYERKTYLIKNRKRFNEKKIKKLQTNIKKREKYDTAETLNNYIVNIDEDNKYEENLPSE KIPKIDTTPRKHFPFPMKTDTCMFDYKKDRDDIQKLKSEERLKNYATLVEEQKKFLRDKS KSKDIEKHKKKKCFLLPKKKLRKRKEKIIIFLNHNSSAYKNGPFNDHFYKTVYKNDLENL DEEKLVIDYSKDNTFKKAIHRIFPQFSIFSLTLYVTFIQWVIFILLISVKSDFPLTPSND SLKNFGSNFPHNIFKNAEFYRLFTSLFLHSNFNHICANTYVQLTVGFLLEYLYGTYVVFL VYVFTGIYGIILSSPLTYCYSTTESSSSSSGIIGIFFSEILMMTNFNVDKISISVHLFCF FLLLLFLKFSLNTVSINIYSHFFGFLGGFLIGIILKRNQLKYFLRNNFLIQILCFVFLVI SLGAAIFISTYVVQNCPN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_1411200.fa Sequence name : PF3D7_1411200 Sequence length : 738 VALUES OF COMPUTED PARAMETERS Coef20 : 4.164 CoefTot : -0.240 ChDiff : 29 ZoneTo : 14 KR : 4 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.582 3.006 0.639 0.972 MesoH : 1.145 1.482 0.106 0.574 MuHd_075 : 10.953 0.857 2.727 0.489 MuHd_095 : 17.818 12.846 4.793 3.909 MuHd_100 : 20.237 11.777 6.233 3.697 MuHd_105 : 18.144 8.097 6.201 2.768 Hmax_075 : -7.000 3.500 -3.817 0.642 Hmax_095 : -5.338 4.462 -3.517 1.391 Hmax_100 : -2.700 8.200 -2.737 1.650 Hmax_105 : 4.550 4.550 -0.678 1.680 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9481 0.0519 DFMC : 0.9420 0.0580
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 738 PF3D7_1411200 MVKKKTSVNVKSILETKNKREKKDEDDDEDNKTNKLYNNLYKRNKSIRINILDKNENNGEGISLSSEKQKVSFKKKNNNY 80 DINESDGVGDYGDDECEEESEIENEDIINNKNNTNNINNINITNNINNTNNFDNTNNIDNTNNIGNTNNIQINNILERNS 160 KEKSLYKEELTTNIQNGENNTVQFFNFKKYDYNPDRKKTRDDLNDDNENSCSSFTRRGKYNKTKTIKKSNKLKLTNTHEN 240 LLSDHHDYTSLKVNYKINKKSNYDKTKKRPFLSITFNEKQNRPVNRSSVCTDNAKFLSFLNDYERKTYLIKNRKRFNEKK 320 IKKLQTNIKKREKYDTAETLNNYIVNIDEDNKYEENLPSEKIPKIDTTPRKHFPFPMKTDTCMFDYKKDRDDIQKLKSEE 400 RLKNYATLVEEQKKFLRDKSKSKDIEKHKKKKCFLLPKKKLRKRKEKIIIFLNHNSSAYKNGPFNDHFYKTVYKNDLENL 480 DEEKLVIDYSKDNTFKKAIHRIFPQFSIFSLTLYVTFIQWVIFILLISVKSDFPLTPSNDSLKNFGSNFPHNIFKNAEFY 560 RLFTSLFLHSNFNHICANTYVQLTVGFLLEYLYGTYVVFLVYVFTGIYGIILSSPLTYCYSTTESSSSSSGIIGIFFSEI 640 LMMTNFNVDKISISVHLFCFFLLLLFLKFSLNTVSINIYSHFFGFLGGFLIGIILKRNQLKYFLRNNFLIQILCFVFLVI 720 SLGAAIFISTYVVQNCPN 800 ......................P......................................................... 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 .................. 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PF3D7_1411200 3 ----MVK|KK 0.060 . PF3D7_1411200 4 ---MVKK|KT 0.128 . PF3D7_1411200 5 --MVKKK|TS 0.108 . PF3D7_1411200 11 KTSVNVK|SI 0.084 . PF3D7_1411200 17 KSILETK|NK 0.060 . PF3D7_1411200 19 ILETKNK|RE 0.062 . PF3D7_1411200 20 LETKNKR|EK 0.150 . PF3D7_1411200 22 TKNKREK|KD 0.073 . PF3D7_1411200 23 KNKREKK|DE 0.591 *ProP* PF3D7_1411200 32 DDDEDNK|TN 0.051 . PF3D7_1411200 35 EDNKTNK|LY 0.060 . PF3D7_1411200 42 LYNNLYK|RN 0.066 . PF3D7_1411200 43 YNNLYKR|NK 0.183 . PF3D7_1411200 45 NLYKRNK|SI 0.089 . PF3D7_1411200 48 KRNKSIR|IN 0.112 . PF3D7_1411200 54 RINILDK|NE 0.069 . PF3D7_1411200 68 ISLSSEK|QK 0.056 . PF3D7_1411200 70 LSSEKQK|VS 0.086 . PF3D7_1411200 74 KQKVSFK|KK 0.064 . PF3D7_1411200 75 QKVSFKK|KN 0.107 . PF3D7_1411200 76 KVSFKKK|NN 0.128 . PF3D7_1411200 111 EDIINNK|NN 0.062 . PF3D7_1411200 158 INNILER|NS 0.083 . PF3D7_1411200 161 ILERNSK|EK 0.101 . PF3D7_1411200 163 ERNSKEK|SL 0.159 . PF3D7_1411200 167 KEKSLYK|EE 0.055 . PF3D7_1411200 188 VQFFNFK|KY 0.061 . PF3D7_1411200 189 QFFNFKK|YD 0.083 . PF3D7_1411200 196 YDYNPDR|KK 0.075 . PF3D7_1411200 197 DYNPDRK|KT 0.084 . PF3D7_1411200 198 YNPDRKK|TR 0.087 . PF3D7_1411200 200 PDRKKTR|DD 0.102 . PF3D7_1411200 216 SCSSFTR|RG 0.086 . PF3D7_1411200 217 CSSFTRR|GK 0.259 . PF3D7_1411200 219 SFTRRGK|YN 0.127 . PF3D7_1411200 222 RRGKYNK|TK 0.069 . PF3D7_1411200 224 GKYNKTK|TI 0.081 . PF3D7_1411200 227 NKTKTIK|KS 0.062 . PF3D7_1411200 228 KTKTIKK|SN 0.130 . PF3D7_1411200 231 TIKKSNK|LK 0.066 . PF3D7_1411200 233 KKSNKLK|LT 0.095 . PF3D7_1411200 252 HDYTSLK|VN 0.063 . PF3D7_1411200 256 SLKVNYK|IN 0.065 . PF3D7_1411200 259 VNYKINK|KS 0.058 . PF3D7_1411200 260 NYKINKK|SN 0.115 . PF3D7_1411200 265 KKSNYDK|TK 0.071 . PF3D7_1411200 267 SNYDKTK|KR 0.063 . PF3D7_1411200 268 NYDKTKK|RP 0.072 . PF3D7_1411200 269 YDKTKKR|PF 0.197 . PF3D7_1411200 279 SITFNEK|QN 0.067 . PF3D7_1411200 282 FNEKQNR|PV 0.123 . PF3D7_1411200 286 QNRPVNR|SS 0.172 . PF3D7_1411200 295 VCTDNAK|FL 0.066 . PF3D7_1411200 305 FLNDYER|KT 0.077 . PF3D7_1411200 306 LNDYERK|TY 0.070 . PF3D7_1411200 311 RKTYLIK|NR 0.055 . PF3D7_1411200 313 TYLIKNR|KR 0.084 . PF3D7_1411200 314 YLIKNRK|RF 0.066 . PF3D7_1411200 315 LIKNRKR|FN 0.288 . PF3D7_1411200 319 RKRFNEK|KI 0.073 . PF3D7_1411200 320 KRFNEKK|IK 0.108 . PF3D7_1411200 322 FNEKKIK|KL 0.068 . PF3D7_1411200 323 NEKKIKK|LQ 0.086 . PF3D7_1411200 329 KLQTNIK|KR 0.068 . PF3D7_1411200 330 LQTNIKK|RE 0.068 . PF3D7_1411200 331 QTNIKKR|EK 0.245 . PF3D7_1411200 333 NIKKREK|YD 0.067 . PF3D7_1411200 352 NIDEDNK|YE 0.056 . PF3D7_1411200 361 ENLPSEK|IP 0.052 . PF3D7_1411200 364 PSEKIPK|ID 0.065 . PF3D7_1411200 370 KIDTTPR|KH 0.080 . PF3D7_1411200 371 IDTTPRK|HF 0.075 . PF3D7_1411200 378 HFPFPMK|TD 0.064 . PF3D7_1411200 387 TCMFDYK|KD 0.064 . PF3D7_1411200 388 CMFDYKK|DR 0.121 . PF3D7_1411200 390 FDYKKDR|DD 0.160 . PF3D7_1411200 395 DRDDIQK|LK 0.062 . PF3D7_1411200 397 DDIQKLK|SE 0.072 . PF3D7_1411200 401 KLKSEER|LK 0.075 . PF3D7_1411200 403 KSEERLK|NY 0.060 . PF3D7_1411200 413 TLVEEQK|KF 0.056 . PF3D7_1411200 414 LVEEQKK|FL 0.118 . PF3D7_1411200 417 EQKKFLR|DK 0.131 . PF3D7_1411200 419 KKFLRDK|SK 0.096 . PF3D7_1411200 421 FLRDKSK|SK 0.106 . PF3D7_1411200 423 RDKSKSK|DI 0.090 . PF3D7_1411200 427 KSKDIEK|HK 0.061 . PF3D7_1411200 429 KDIEKHK|KK 0.060 . PF3D7_1411200 430 DIEKHKK|KK 0.097 . PF3D7_1411200 431 IEKHKKK|KC 0.094 . PF3D7_1411200 432 EKHKKKK|CF 0.094 . PF3D7_1411200 438 KCFLLPK|KK 0.058 . PF3D7_1411200 439 CFLLPKK|KL 0.072 . PF3D7_1411200 440 FLLPKKK|LR 0.088 . PF3D7_1411200 442 LPKKKLR|KR 0.099 . PF3D7_1411200 443 PKKKLRK|RK 0.088 . PF3D7_1411200 444 KKKLRKR|KE 0.155 . PF3D7_1411200 445 KKLRKRK|EK 0.314 . PF3D7_1411200 447 LRKRKEK|II 0.192 . PF3D7_1411200 460 HNSSAYK|NG 0.062 . PF3D7_1411200 470 FNDHFYK|TV 0.077 . PF3D7_1411200 474 FYKTVYK|ND 0.060 . PF3D7_1411200 484 ENLDEEK|LV 0.064 . PF3D7_1411200 491 LVIDYSK|DN 0.068 . PF3D7_1411200 496 SKDNTFK|KA 0.069 . PF3D7_1411200 497 KDNTFKK|AI 0.237 . PF3D7_1411200 501 FKKAIHR|IF 0.076 . PF3D7_1411200 530 ILLISVK|SD 0.079 . PF3D7_1411200 543 PSNDSLK|NF 0.078 . PF3D7_1411200 555 FPHNIFK|NA 0.080 . PF3D7_1411200 561 KNAEFYR|LF 0.101 . PF3D7_1411200 650 TNFNVDK|IS 0.064 . PF3D7_1411200 668 LLLLFLK|FS 0.056 . PF3D7_1411200 696 LIGIILK|RN 0.054 . PF3D7_1411200 697 IGIILKR|NQ 0.124 . PF3D7_1411200 701 LKRNQLK|YF 0.072 . PF3D7_1411200 705 QLKYFLR|NN 0.085 . ____________________________^_________________

  • Fasta :-

    >PF3D7_1411200 ATGGTTAAAAAAAAAACAAGTGTTAATGTAAAATCTATTTTAGAAACAAAAAATAAAAGA GAAAAAAAAGACGAAGATGATGATGAAGATAATAAAACAAACAAGTTATATAATAATTTA TATAAGCGAAATAAATCAATCCGAATAAATATCTTAGATAAAAATGAAAATAATGGAGAG GGGATATCTCTTTCGAGTGAAAAGCAGAAGGTAAGTTTTAAAAAAAAGAATAATAACTAT GATATAAATGAAAGTGACGGTGTGGGGGATTATGGTGATGATGAATGTGAAGAAGAAAGT GAAATAGAAAACGAGGATATAATTAATAATAAAAATAATACAAATAATATAAACAATATA AATATTACAAATAATATTAATAATACAAACAATTTTGATAATACAAACAATATTGATAAT ACAAACAATATTGGTAATACAAATAATATTCAAATTAATAATATTCTTGAAAGGAATAGT AAAGAAAAAAGTCTTTATAAAGAAGAGCTGACTACAAATATACAAAATGGTGAAAATAAT ACAGTACAATTTTTTAATTTTAAAAAATATGATTATAACCCTGATCGTAAAAAAACGAGA GATGATTTAAATGATGATAACGAAAACAGCTGTAGTAGTTTTACGAGGAGAGGAAAATAT AATAAAACGAAAACTATTAAAAAAAGTAATAAGTTAAAATTAACAAATACACACGAAAAT TTATTATCTGATCATCATGATTATACATCGTTAAAAGTTAATTACAAAATTAATAAGAAA AGTAATTATGATAAAACAAAAAAGAGACCATTTTTATCTATAACGTTTAATGAAAAACAA AATAGGCCAGTTAATAGAAGTAGTGTTTGTACAGATAATGCAAAATTTTTAAGTTTCTTA AATGATTATGAAAGGAAGACATATCTTATAAAAAATAGAAAAAGATTTAATGAAAAGAAA ATAAAAAAATTACAAACAAACATCAAAAAAAGAGAAAAATATGATACAGCAGAAACCTTA AATAATTATATTGTTAATATTGATGAAGATAATAAATATGAAGAAAATCTTCCAAGTGAA AAAATACCTAAAATAGACACCACACCTAGAAAACATTTTCCTTTTCCAATGAAAACAGAT ACCTGTATGTTTGATTATAAAAAAGATAGAGATGATATTCAAAAATTAAAAAGTGAAGAA CGTTTAAAAAATTATGCTACTCTTGTGGAAGAACAAAAAAAGTTTTTAAGAGACAAAAGC AAAAGTAAAGATATAGAAAAACATAAAAAGAAAAAATGCTTCTTATTACCTAAAAAAAAA TTAAGGAAAAGAAAAGAAAAAATTATTATATTTCTTAATCACAATTCATCAGCATATAAA AATGGACCTTTTAATGATCATTTCTATAAAACTGTATATAAAAATGACTTAGAAAATCTA GACGAAGAAAAACTGGTTATTGATTATAGTAAAGATAATACTTTTAAAAAGGCTATTCAT CGAATCTTCCCGCAATTCTCTATATTCAGTTTAACGTTATATGTGACATTTATTCAGTGG GTTATATTTATATTGCTTATATCTGTAAAATCAGATTTCCCCCTGACACCATCAAATGAT TCCTTAAAAAATTTTGGTAGTAATTTTCCACACAACATTTTTAAAAATGCAGAGTTTTAT CGCCTCTTTACGTCTCTTTTTCTGCATTCCAATTTTAACCACATTTGTGCAAATACTTAT GTGCAGCTAACAGTAGGATTTCTATTAGAATACTTGTATGGAACATATGTAGTTTTTTTA GTATATGTATTTACAGGTATTTATGGAATAATTCTATCATCTCCATTAACCTACTGCTAC TCAACGACCGAAAGCAGTAGTAGTTCTTCAGGAATAATTGGAATATTTTTTTCCGAAATT TTAATGATGACTAATTTTAATGTAGACAAAATTAGTATTAGTGTGCATTTGTTTTGTTTT TTTCTACTACTGTTATTTTTGAAATTTTCTTTGAATACTGTTAGTATAAATATTTACAGT CATTTTTTTGGTTTTCTTGGAGGCTTTTTAATAGGAATAATTTTGAAACGTAATCAATTG AAATATTTTTTGAGGAATAATTTTTTAATTCAAATTTTGTGTTTTGTTTTTCTAGTTATA AGTTTAGGGGCTGCCATTTTTATTTCCACCTATGTTGTTCAGAATTGTCCAAATTAA
  • Download Fasta

  • Fasta :-

    MVKKKTSVNVKSILETKNKREKKDEDDDEDNKTNKLYNNLYKRNKSIRINILDKNENNGE GISLSSEKQKVSFKKKNNNYDINESDGVGDYGDDECEEESEIENEDIINNKNNTNNINNI NITNNINNTNNFDNTNNIDNTNNIGNTNNIQINNILERNSKEKSLYKEELTTNIQNGENN TVQFFNFKKYDYNPDRKKTRDDLNDDNENSCSSFTRRGKYNKTKTIKKSNKLKLTNTHEN LLSDHHDYTSLKVNYKINKKSNYDKTKKRPFLSITFNEKQNRPVNRSSVCTDNAKFLSFL NDYERKTYLIKNRKRFNEKKIKKLQTNIKKREKYDTAETLNNYIVNIDEDNKYEENLPSE KIPKIDTTPRKHFPFPMKTDTCMFDYKKDRDDIQKLKSEERLKNYATLVEEQKKFLRDKS KSKDIEKHKKKKCFLLPKKKLRKRKEKIIIFLNHNSSAYKNGPFNDHFYKTVYKNDLENL DEEKLVIDYSKDNTFKKAIHRIFPQFSIFSLTLYVTFIQWVIFILLISVKSDFPLTPSND SLKNFGSNFPHNIFKNAEFYRLFTSLFLHSNFNHICANTYVQLTVGFLLEYLYGTYVVFL VYVFTGIYGIILSSPLTYCYSTTESSSSSSGIIGIFFSEILMMTNFNVDKISISVHLFCF FLLLLFLKFSLNTVSINIYSHFFGFLGGFLIGIILKRNQLKYFLRNNFLIQILCFVFLVI SLGAAIFISTYVVQNCPN

No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PF3D7_1411200541 SPSNDSLKNF0.991unspPF3D7_1411200541 SPSNDSLKNF0.991unspPF3D7_1411200541 SPSNDSLKNF0.991unspPF3D7_1411200160 SLERNSKEKS0.997unspPF3D7_1411200398 SQKLKSEERL0.997unsp

PF14_0110      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India