PF3D7_1430200 | plasmepsin IX

_IDPredictionOTHERSPmTPCS_Position
PF3D7_1430200OTHER0.9926760.0058460.001478
No Results

  • Fasta :-

    >PF3D7_1430200 MFFINFKKIKKKQFPIYLTQHRIITVFLIFIYFINLKDCFHINNSRILSDVDKHRGLYYN IPKCNVCHKCSICTHENGEAQNVIPMVAIPSKRKHIQDINKEREENKYPLHIFEEKDIYN NKDNVVKKEDIYKLRKKKKQKKNCLNFLEKDTMFLSPSHDKETFHINHMNKIKDEKYKQE YEEEKEIYDNTNTSQEKNETNNEQNLNINLINNDKVTLPLQQLEDSQYVGYIQIGTPPQT IRPIFDTGSTNIWIVSTKCKDETCLKVHRYNHKLSSSFKYYEPHTNLDIMFGTGIIQGVI GVETFKIGPFEIKNQSFGLVKREKASDNKSNVFERINFEGIVGLAFPEMLSTGKSTLYEN LMSSYKLQHNEFSIYIGKDSKYSALIFGGVDKNFFEGDIYMFPVVKEYYWEIHFDGLYID HQKFCCGVNSIVYDLKKKDQENNKLFFTRKYFRKNKFKTHLRKYLLKKIKHQKKQKHSNH KKKKLNKKKNYLIFDSGTSFNSVPKDEIEYFFRVVPSKKCDDSNIDQVVSSYPNLTYVIN KMPFTLTPSQYLVRKNDMCKPAFMEIEVSSEYGHAYILGNATFMRYYYTVYRRGNNNNSS YVGIAKAVHTEENEKYLSSLHNKINNL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_1430200.fa Sequence name : PF3D7_1430200 Sequence length : 627 VALUES OF COMPUTED PARAMETERS Coef20 : 3.808 CoefTot : -1.561 ChDiff : 27 ZoneTo : 37 KR : 7 DE : 0 CleavSite : 32 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.324 1.900 0.149 0.660 MesoH : -0.715 0.204 -0.440 0.221 MuHd_075 : 39.034 24.447 11.680 8.470 MuHd_095 : 21.166 13.602 5.578 5.348 MuHd_100 : 25.815 14.895 7.643 6.236 MuHd_105 : 22.131 16.464 7.414 5.531 Hmax_075 : 12.900 15.900 2.066 5.600 Hmax_095 : -2.600 22.600 -3.290 2.360 Hmax_100 : 4.100 9.700 -0.130 4.160 Hmax_105 : 1.300 20.100 -1.553 7.150 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8903 0.1097 DFMC : 0.8810 0.1190
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 627 PF3D7_1430200 MFFINFKKIKKKQFPIYLTQHRIITVFLIFIYFINLKDCFHINNSRILSDVDKHRGLYYNIPKCNVCHKCSICTHENGEA 80 QNVIPMVAIPSKRKHIQDINKEREENKYPLHIFEEKDIYNNKDNVVKKEDIYKLRKKKKQKKNCLNFLEKDTMFLSPSHD 160 KETFHINHMNKIKDEKYKQEYEEEKEIYDNTNTSQEKNETNNEQNLNINLINNDKVTLPLQQLEDSQYVGYIQIGTPPQT 240 IRPIFDTGSTNIWIVSTKCKDETCLKVHRYNHKLSSSFKYYEPHTNLDIMFGTGIIQGVIGVETFKIGPFEIKNQSFGLV 320 KREKASDNKSNVFERINFEGIVGLAFPEMLSTGKSTLYENLMSSYKLQHNEFSIYIGKDSKYSALIFGGVDKNFFEGDIY 400 MFPVVKEYYWEIHFDGLYIDHQKFCCGVNSIVYDLKKKDQENNKLFFTRKYFRKNKFKTHLRKYLLKKIKHQKKQKHSNH 480 KKKKLNKKKNYLIFDSGTSFNSVPKDEIEYFFRVVPSKKCDDSNIDQVVSSYPNLTYVINKMPFTLTPSQYLVRKNDMCK 560 PAFMEIEVSSEYGHAYILGNATFMRYYYTVYRRGNNNNSSYVGIAKAVHTEENEKYLSSLHNKINNL 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_1430200 7 MFFINFK|KI 0.063 . PF3D7_1430200 8 FFINFKK|IK 0.106 . PF3D7_1430200 10 INFKKIK|KK 0.062 . PF3D7_1430200 11 NFKKIKK|KQ 0.089 . PF3D7_1430200 12 FKKIKKK|QF 0.154 . PF3D7_1430200 22 IYLTQHR|II 0.082 . PF3D7_1430200 37 IYFINLK|DC 0.067 . PF3D7_1430200 46 FHINNSR|IL 0.098 . PF3D7_1430200 53 ILSDVDK|HR 0.076 . PF3D7_1430200 55 SDVDKHR|GL 0.114 . PF3D7_1430200 63 LYYNIPK|CN 0.059 . PF3D7_1430200 69 KCNVCHK|CS 0.066 . PF3D7_1430200 92 MVAIPSK|RK 0.065 . PF3D7_1430200 93 VAIPSKR|KH 0.156 . PF3D7_1430200 94 AIPSKRK|HI 0.096 . PF3D7_1430200 101 HIQDINK|ER 0.060 . PF3D7_1430200 103 QDINKER|EE 0.098 . PF3D7_1430200 107 KEREENK|YP 0.073 . PF3D7_1430200 116 LHIFEEK|DI 0.076 . PF3D7_1430200 122 KDIYNNK|DN 0.067 . PF3D7_1430200 127 NKDNVVK|KE 0.059 . PF3D7_1430200 128 KDNVVKK|ED 0.135 . PF3D7_1430200 133 KKEDIYK|LR 0.057 . PF3D7_1430200 135 EDIYKLR|KK 0.092 . PF3D7_1430200 136 DIYKLRK|KK 0.073 . PF3D7_1430200 137 IYKLRKK|KK 0.087 . PF3D7_1430200 138 YKLRKKK|KQ 0.253 . PF3D7_1430200 139 KLRKKKK|QK 0.159 . PF3D7_1430200 141 RKKKKQK|KN 0.070 . PF3D7_1430200 142 KKKKQKK|NC 0.093 . PF3D7_1430200 150 CLNFLEK|DT 0.072 . PF3D7_1430200 161 LSPSHDK|ET 0.077 . PF3D7_1430200 171 HINHMNK|IK 0.084 . PF3D7_1430200 173 NHMNKIK|DE 0.077 . PF3D7_1430200 176 NKIKDEK|YK 0.071 . PF3D7_1430200 178 IKDEKYK|QE 0.081 . PF3D7_1430200 185 QEYEEEK|EI 0.072 . PF3D7_1430200 197 TNTSQEK|NE 0.063 . PF3D7_1430200 215 NLINNDK|VT 0.057 . PF3D7_1430200 242 TPPQTIR|PI 0.142 . PF3D7_1430200 258 IWIVSTK|CK 0.065 . PF3D7_1430200 260 IVSTKCK|DE 0.077 . PF3D7_1430200 266 KDETCLK|VH 0.051 . PF3D7_1430200 269 TCLKVHR|YN 0.103 . PF3D7_1430200 273 VHRYNHK|LS 0.066 . PF3D7_1430200 279 KLSSSFK|YY 0.096 . PF3D7_1430200 306 IGVETFK|IG 0.057 . PF3D7_1430200 313 IGPFEIK|NQ 0.065 . PF3D7_1430200 321 QSFGLVK|RE 0.057 . PF3D7_1430200 322 SFGLVKR|EK 0.135 . PF3D7_1430200 324 GLVKREK|AS 0.072 . PF3D7_1430200 329 EKASDNK|SN 0.072 . PF3D7_1430200 335 KSNVFER|IN 0.146 . PF3D7_1430200 354 EMLSTGK|ST 0.069 . PF3D7_1430200 366 NLMSSYK|LQ 0.061 . PF3D7_1430200 378 FSIYIGK|DS 0.066 . PF3D7_1430200 381 YIGKDSK|YS 0.065 . PF3D7_1430200 392 IFGGVDK|NF 0.065 . PF3D7_1430200 406 YMFPVVK|EY 0.063 . PF3D7_1430200 423 LYIDHQK|FC 0.069 . PF3D7_1430200 436 SIVYDLK|KK 0.067 . PF3D7_1430200 437 IVYDLKK|KD 0.081 . PF3D7_1430200 438 VYDLKKK|DQ 0.095 . PF3D7_1430200 444 KDQENNK|LF 0.058 . PF3D7_1430200 449 NKLFFTR|KY 0.096 . PF3D7_1430200 450 KLFFTRK|YF 0.092 . PF3D7_1430200 453 FTRKYFR|KN 0.080 . PF3D7_1430200 454 TRKYFRK|NK 0.109 . PF3D7_1430200 456 KYFRKNK|FK 0.154 . PF3D7_1430200 458 FRKNKFK|TH 0.063 . PF3D7_1430200 462 KFKTHLR|KY 0.066 . PF3D7_1430200 463 FKTHLRK|YL 0.112 . PF3D7_1430200 467 LRKYLLK|KI 0.075 . PF3D7_1430200 468 RKYLLKK|IK 0.115 . PF3D7_1430200 470 YLLKKIK|HQ 0.071 . PF3D7_1430200 473 KKIKHQK|KQ 0.067 . PF3D7_1430200 474 KIKHQKK|QK 0.118 . PF3D7_1430200 476 KHQKKQK|HS 0.075 . PF3D7_1430200 481 QKHSNHK|KK 0.059 . PF3D7_1430200 482 KHSNHKK|KK 0.113 . PF3D7_1430200 483 HSNHKKK|KL 0.208 . PF3D7_1430200 484 SNHKKKK|LN 0.159 . PF3D7_1430200 487 KKKKLNK|KK 0.065 . PF3D7_1430200 488 KKKLNKK|KN 0.113 . PF3D7_1430200 489 KKLNKKK|NY 0.102 . PF3D7_1430200 505 SFNSVPK|DE 0.076 . PF3D7_1430200 513 EIEYFFR|VV 0.090 . PF3D7_1430200 518 FRVVPSK|KC 0.073 . PF3D7_1430200 519 RVVPSKK|CD 0.118 . PF3D7_1430200 541 LTYVINK|MP 0.067 . PF3D7_1430200 554 PSQYLVR|KN 0.092 . PF3D7_1430200 555 SQYLVRK|ND 0.083 . PF3D7_1430200 560 RKNDMCK|PA 0.083 . PF3D7_1430200 585 GNATFMR|YY 0.143 . PF3D7_1430200 592 YYYTVYR|RG 0.069 . PF3D7_1430200 593 YYTVYRR|GN 0.099 . PF3D7_1430200 606 SYVGIAK|AV 0.107 . PF3D7_1430200 615 HTEENEK|YL 0.063 . PF3D7_1430200 623 LSSLHNK|IN 0.073 . ____________________________^_________________

  • Fasta :-

    >PF3D7_1430200 ATGTTTTTTATAAATTTTAAGAAAATAAAAAAGAAACAATTTCCGATATATTTAACTCAA CATAGAATTATAACAGTGTTTCTTATTTTTATTTATTTTATAAACTTAAAAGATTGTTTC CATATAAATAATTCGCGTATATTAAGTGATGTAGATAAACATAGAGGATTGTATTATAAT ATACCAAAATGTAACGTATGTCATAAGTGTTCGATATGTACCCACGAAAATGGAGAGGCA CAGAATGTCATTCCTATGGTTGCTATACCGAGCAAGAGAAAACATATTCAAGATATAAAT AAGGAAAGGGAGGAAAACAAATATCCTTTACATATATTTGAAGAAAAAGACATTTATAAT AATAAAGATAATGTTGTTAAAAAAGAAGATATATATAAATTAAGAAAAAAAAAAAAACAG AAAAAAAATTGTTTAAATTTTCTTGAAAAGGATACAATGTTTTTGTCACCTTCACATGAT AAAGAAACGTTTCATATAAATCATATGAATAAAATAAAAGATGAAAAATATAAACAAGAA TATGAAGAAGAGAAAGAAATATATGATAATACAAATACATCACAAGAAAAAAATGAAACA AACAATGAACAGAATCTAAATATTAATTTAATAAACAATGATAAAGTGACATTACCCTTA CAACAATTGGAAGATAGTCAATATGTTGGCTACATTCAAATAGGAACTCCTCCACAAACC ATAAGACCCATATTTGATACAGGAAGCACAAATATATGGATTGTAAGCACAAAGTGCAAA GATGAAACATGCTTAAAAGTACATAGGTACAACCATAAACTGTCTAGCAGTTTTAAATAT TACGAACCTCATACAAACCTAGATATTATGTTTGGCACAGGAATAATACAAGGGGTAATA GGAGTGGAGACATTTAAGATTGGACCGTTTGAAATAAAAAATCAATCTTTTGGTTTGGTA AAAAGAGAAAAAGCTAGCGATAATAAATCTAATGTTTTTGAAAGAATAAATTTTGAAGGT ATTGTTGGATTAGCTTTTCCAGAAATGTTATCGACTGGTAAGAGTACGCTTTATGAGAAT TTGATGTCTTCATATAAATTACAACATAATGAATTTTCCATATATATTGGTAAGGATAGT AAATATTCTGCATTAATATTTGGAGGGGTAGATAAAAATTTTTTTGAAGGAGATATATAT ATGTTTCCTGTTGTTAAGGAATATTATTGGGAAATCCATTTTGATGGTTTATATATTGAT CATCAGAAATTTTGTTGTGGTGTTAATTCTATTGTATATGATTTAAAAAAAAAAGATCAA GAAAATAATAAATTATTTTTTACGAGAAAATATTTTAGAAAAAATAAATTCAAAACTCAT TTAAGAAAATATCTTCTTAAAAAAATAAAACATCAAAAAAAACAAAAACATTCTAATCAT AAAAAAAAAAAATTAAACAAGAAAAAAAATTACTTAATTTTTGATTCTGGAACATCTTTT AATAGTGTCCCAAAGGATGAAATCGAATATTTCTTTCGTGTCGTTCCTTCAAAGAAATGT GATGATAGTAACATTGATCAGGTGGTTTCGAGTTACCCCAACTTGACTTACGTCATAAAC AAAATGCCGTTCACGTTGACCCCCTCACAATACTTGGTTCGTAAGAATGATATGTGTAAA CCAGCTTTTATGGAAATAGAAGTTTCATCTGAATATGGACATGCGTACATACTAGGGAAT GCAACGTTTATGAGATATTATTACACTGTTTATAGACGAGGAAATAATAACAATAGTTCA TATGTGGGTATTGCTAAAGCTGTTCATACAGAGGAAAACGAAAAATATCTCAGTTCCTTA CATAATAAAATAAATAATTTATAA
  • Download Fasta

  • Fasta :-

    MFFINFKKIKKKQFPIYLTQHRIITVFLIFIYFINLKDCFHINNSRILSDVDKHRGLYYN IPKCNVCHKCSICTHENGEAQNVIPMVAIPSKRKHIQDINKEREENKYPLHIFEEKDIYN NKDNVVKKEDIYKLRKKKKQKKNCLNFLEKDTMFLSPSHDKETFHINHMNKIKDEKYKQE YEEEKEIYDNTNTSQEKNETNNEQNLNINLINNDKVTLPLQQLEDSQYVGYIQIGTPPQT IRPIFDTGSTNIWIVSTKCKDETCLKVHRYNHKLSSSFKYYEPHTNLDIMFGTGIIQGVI GVETFKIGPFEIKNQSFGLVKREKASDNKSNVFERINFEGIVGLAFPEMLSTGKSTLYEN LMSSYKLQHNEFSIYIGKDSKYSALIFGGVDKNFFEGDIYMFPVVKEYYWEIHFDGLYID HQKFCCGVNSIVYDLKKKDQENNKLFFTRKYFRKNKFKTHLRKYLLKKIKHQKKQKHSNH KKKKLNKKKNYLIFDSGTSFNSVPKDEIEYFFRVVPSKKCDDSNIDQVVSSYPNLTYVIN KMPFTLTPSQYLVRKNDMCKPAFMEIEVSSEYGHAYILGNATFMRYYYTVYRRGNNNNSS YVGIAKAVHTEENEKYLSSLHNKINNL

  • title: catalytic residue
  • coordinates: D246,D495
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PF3D7_1430200517 SRVVPSKKCD0.992unspPF3D7_1430200517 SRVVPSKKCD0.992unspPF3D7_1430200517 SRVVPSKKCD0.992unspPF3D7_1430200523 SKCDDSNIDQ0.995unspPF3D7_1430200188 YEKEIYDNTN0.99unspPF3D7_1430200194 SNTNTSQEKN0.994unsp

PF14_0281      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India