PF3D7_1465700 | plasmepsin VIII, putative

_IDPredictionOTHERSPmTPCS_Position
PF3D7_1465700SP0.0380060.9614940.000500CS pos: 21-22. VKA-FK. Pr: 0.7137
No Results

  • Fasta :-

    >PF3D7_1465700 MNILFCLFVITNLYNIIAVKAFKENLRVSKYYAGGKHKLNLENKYIGISTIVLKGGYINR QFIGEINIGNPPQTFKVLFDTGSTNLWIPSKNCFTRACYNKRKYDHKISKNYKLVKKKDP VEILFGTGEIHIAYVTDDIHLGDIKVKNQEFGLASYISDDPFSDMQFDGLFGLGISDDKK KKQLIYDSIPKNILEKNMFAIYYPKNVDDDGAITFGGYDKKFIRENSSIEWFDVTSSKYW AIQMKGLKINDVFLDVCSKNHEGFCQAVIDTGTSSIAGPKEDLILLSRLLNPGKFCQKRI LLKNFSFIFIDDKRREREYELTPKDYIVNSFRIDPVLRSPCNFAFMPINISSSNGYLYIL GQIFLQKYYAIFEKDNMKIGLAKSI
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PF3D7_1465700.fa Sequence name : PF3D7_1465700 Sequence length : 385 VALUES OF COMPUTED PARAMETERS Coef20 : 4.555 CoefTot : -6.757 ChDiff : 12 ZoneTo : 118 KR : 21 DE : 5 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.641 2.276 0.334 0.768 MesoH : -0.859 0.257 -0.465 0.194 MuHd_075 : 43.374 27.038 14.359 9.253 MuHd_095 : 37.220 18.962 10.066 7.962 MuHd_100 : 37.493 20.931 10.631 7.457 MuHd_105 : 40.595 19.902 11.799 8.294 Hmax_075 : 2.100 21.583 1.242 2.672 Hmax_095 : 9.100 6.700 -7.060 5.092 Hmax_100 : 8.100 3.400 -1.947 0.800 Hmax_105 : 12.367 4.433 -2.714 4.783 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9865 0.0135 DFMC : 0.9557 0.0443
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 385 PF3D7_1465700 MNILFCLFVITNLYNIIAVKAFKENLRVSKYYAGGKHKLNLENKYIGISTIVLKGGYINRQFIGEINIGNPPQTFKVLFD 80 TGSTNLWIPSKNCFTRACYNKRKYDHKISKNYKLVKKKDPVEILFGTGEIHIAYVTDDIHLGDIKVKNQEFGLASYISDD 160 PFSDMQFDGLFGLGISDDKKKKQLIYDSIPKNILEKNMFAIYYPKNVDDDGAITFGGYDKKFIRENSSIEWFDVTSSKYW 240 AIQMKGLKINDVFLDVCSKNHEGFCQAVIDTGTSSIAGPKEDLILLSRLLNPGKFCQKRILLKNFSFIFIDDKRREREYE 320 LTPKDYIVNSFRIDPVLRSPCNFAFMPINISSSNGYLYILGQIFLQKYYAIFEKDNMKIGLAKSI 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................. 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PF3D7_1465700 20 YNIIAVK|AF 0.063 . PF3D7_1465700 23 IAVKAFK|EN 0.059 . PF3D7_1465700 27 AFKENLR|VS 0.070 . PF3D7_1465700 30 ENLRVSK|YY 0.150 . PF3D7_1465700 36 KYYAGGK|HK 0.058 . PF3D7_1465700 38 YAGGKHK|LN 0.058 . PF3D7_1465700 44 KLNLENK|YI 0.091 . PF3D7_1465700 54 ISTIVLK|GG 0.064 . PF3D7_1465700 60 KGGYINR|QF 0.101 . PF3D7_1465700 76 NPPQTFK|VL 0.070 . PF3D7_1465700 91 NLWIPSK|NC 0.059 . PF3D7_1465700 96 SKNCFTR|AC 0.134 . PF3D7_1465700 101 TRACYNK|RK 0.075 . PF3D7_1465700 102 RACYNKR|KY 0.196 . PF3D7_1465700 103 ACYNKRK|YD 0.104 . PF3D7_1465700 107 KRKYDHK|IS 0.067 . PF3D7_1465700 110 YDHKISK|NY 0.062 . PF3D7_1465700 113 KISKNYK|LV 0.100 . PF3D7_1465700 116 KNYKLVK|KK 0.080 . PF3D7_1465700 117 NYKLVKK|KD 0.081 . PF3D7_1465700 118 YKLVKKK|DP 0.148 . PF3D7_1465700 145 IHLGDIK|VK 0.057 . PF3D7_1465700 147 LGDIKVK|NQ 0.073 . PF3D7_1465700 179 LGISDDK|KK 0.056 . PF3D7_1465700 180 GISDDKK|KK 0.102 . PF3D7_1465700 181 ISDDKKK|KQ 0.088 . PF3D7_1465700 182 SDDKKKK|QL 0.090 . PF3D7_1465700 191 IYDSIPK|NI 0.057 . PF3D7_1465700 196 PKNILEK|NM 0.063 . PF3D7_1465700 205 FAIYYPK|NV 0.080 . PF3D7_1465700 220 TFGGYDK|KF 0.062 . PF3D7_1465700 221 FGGYDKK|FI 0.106 . PF3D7_1465700 224 YDKKFIR|EN 0.110 . PF3D7_1465700 238 FDVTSSK|YW 0.077 . PF3D7_1465700 245 YWAIQMK|GL 0.073 . PF3D7_1465700 248 IQMKGLK|IN 0.062 . PF3D7_1465700 259 FLDVCSK|NH 0.054 . PF3D7_1465700 280 SSIAGPK|ED 0.060 . PF3D7_1465700 288 DLILLSR|LL 0.077 . PF3D7_1465700 294 RLLNPGK|FC 0.063 . PF3D7_1465700 298 PGKFCQK|RI 0.058 . PF3D7_1465700 299 GKFCQKR|IL 0.223 . PF3D7_1465700 303 QKRILLK|NF 0.069 . PF3D7_1465700 313 FIFIDDK|RR 0.056 . PF3D7_1465700 314 IFIDDKR|RE 0.138 . PF3D7_1465700 315 FIDDKRR|ER 0.115 . PF3D7_1465700 317 DDKRRER|EY 0.176 . PF3D7_1465700 324 EYELTPK|DY 0.064 . PF3D7_1465700 332 YIVNSFR|ID 0.071 . PF3D7_1465700 338 RIDPVLR|SP 0.106 . PF3D7_1465700 367 GQIFLQK|YY 0.072 . PF3D7_1465700 374 YYAIFEK|DN 0.083 . PF3D7_1465700 378 FEKDNMK|IG 0.056 . PF3D7_1465700 383 MKIGLAK|SI 0.107 . ____________________________^_________________

  • Fasta :-

    >PF3D7_1465700 ATGAATATATTGTTTTGTTTATTTGTCATTACAAATTTGTATAATATCATTGCTGTTAAA GCTTTTAAAGAAAATTTAAGAGTGTCCAAATATTATGCTGGAGGAAAACATAAATTAAAT TTGGAAAATAAGTATATAGGTATTTCTACAATAGTATTAAAAGGGGGTTACATCAATAGA CAATTTATTGGGGAAATAAATATTGGAAATCCTCCACAAACATTTAAAGTTCTTTTTGAT ACTGGAAGTACAAATTTATGGATTCCATCAAAAAATTGTTTCACAAGAGCGTGTTATAAT AAACGAAAATATGATCATAAAATTTCCAAGAATTATAAATTGGTTAAAAAAAAAGATCCT GTGGAAATTTTATTTGGAACCGGGGAAATACATATTGCTTATGTAACGGATGATATTCAT TTAGGGGATATTAAAGTTAAAAATCAAGAATTTGGTTTAGCTAGTTATATATCAGATGAT CCCTTTTCTGATATGCAATTTGATGGCTTATTTGGCTTAGGCATTTCAGATGACAAAAAG AAAAAACAACTAATTTATGATAGCATTCCTAAAAATATATTAGAAAAAAATATGTTTGCA ATTTATTATCCCAAAAATGTAGATGACGATGGTGCCATCACCTTTGGAGGCTACGACAAA AAATTTATAAGAGAAAATTCAAGTATCGAATGGTTTGACGTAACTTCTTCAAAATATTGG GCTATTCAAATGAAGGGTTTAAAAATAAATGATGTCTTTCTTGATGTATGTTCAAAAAAT CATGAAGGATTTTGTCAGGCTGTAATAGATACAGGAACATCAAGCATAGCTGGGCCAAAA GAAGATCTAATATTATTAAGCCGATTGTTAAATCCAGGAAAATTTTGTCAAAAAAGGATT TTATTAAAAAATTTTTCTTTCATTTTTATTGATGATAAAAGAAGAGAAAGAGAATATGAA TTAACACCCAAGGATTATATTGTAAATTCATTTAGAATAGACCCTGTTTTAAGATCCCCA TGCAATTTTGCATTCATGCCAATTAATATTTCATCTTCAAATGGATATCTATATATACTT GGTCAAATATTCTTACAAAAATATTACGCAATATTTGAAAAGGACAATATGAAAATAGGT TTAGCGAAGTCCATATAA
  • Download Fasta

  • Fasta :-

    MNILFCLFVITNLYNIIAVKAFKENLRVSKYYAGGKHKLNLENKYIGISTIVLKGGYINR QFIGEINIGNPPQTFKVLFDTGSTNLWIPSKNCFTRACYNKRKYDHKISKNYKLVKKKDP VEILFGTGEIHIAYVTDDIHLGDIKVKNQEFGLASYISDDPFSDMQFDGLFGLGISDDKK KKQLIYDSIPKNILEKNMFAIYYPKNVDDDGAITFGGYDKKFIRENSSIEWFDVTSSKYW AIQMKGLKINDVFLDVCSKNHEGFCQAVIDTGTSSIAGPKEDLILLSRLLNPGKFCQKRI LLKNFSFIFIDDKRREREYELTPKDYIVNSFRIDPVLRSPCNFAFMPINISSSNGYLYIL GQIFLQKYYAIFEKDNMKIGLAKSI

No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PF3D7_1465700228 SRENSSIEWF0.992unspPF3D7_1465700322 TEYELTPKDY0.99unsp

PF14_0625      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India