PKNH_0104300 | cysteine-rich secretory protein, putative

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_IDPredictionOTHERSPmTPCS_Position
PKNH_0104300SP0.0593250.9378940.002781CS pos: 26-27. CKA-VA. Pr: 0.4805
No Results

  • Fasta :-

    >PKNH_0104300 MVDRRLHYLFALFCFLYLSRISSCKAVAGSFCSFNNDSIRERHNDLRMKHNADPLHWSTH LEEAASAEAKLIKDMSNCTVLVNQINTNYFTISTKSKIESAVDTWYEGINNYDFELGPIR RGDDTVFEFTRVVWNSAEHIGCSSACCGNRGVLICKYDNNTNQPGHFADNVGTLDPMFVW ENFAFAPEQRRPGSETSQNDLPPLPIS
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_0104300.fa Sequence name : PKNH_0104300 Sequence length : 207 VALUES OF COMPUTED PARAMETERS Coef20 : 4.784 CoefTot : 0.576 ChDiff : -6 ZoneTo : 36 KR : 4 DE : 1 CleavSite : 22 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.124 1.494 0.279 0.510 MesoH : -1.039 -0.095 -0.473 0.098 MuHd_075 : 28.028 17.123 9.002 6.194 MuHd_095 : 30.861 16.547 7.701 6.884 MuHd_100 : 18.682 13.821 4.230 4.689 MuHd_105 : 17.365 16.079 3.894 4.957 Hmax_075 : 15.867 17.500 4.752 5.066 Hmax_095 : 17.675 19.863 4.491 6.694 Hmax_100 : 11.600 19.900 1.875 7.060 Hmax_105 : 9.200 17.700 4.247 5.900 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.4675 0.5325 DFMC : 0.7137 0.2863
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 207 PKNH_0104300 MVDRRLHYLFALFCFLYLSRISSCKAVAGSFCSFNNDSIRERHNDLRMKHNADPLHWSTHLEEAASAEAKLIKDMSNCTV 80 LVNQINTNYFTISTKSKIESAVDTWYEGINNYDFELGPIRRGDDTVFEFTRVVWNSAEHIGCSSACCGNRGVLICKYDNN 160 TNQPGHFADNVGTLDPMFVWENFAFAPEQRRPGSETSQNDLPPLPIS 240 ................................................................................ 80 ................................................................................ 160 ............................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_0104300 4 ---MVDR|RL 0.088 . PKNH_0104300 5 --MVDRR|LH 0.083 . PKNH_0104300 20 CFLYLSR|IS 0.071 . PKNH_0104300 25 SRISSCK|AV 0.109 . PKNH_0104300 40 FNNDSIR|ER 0.104 . PKNH_0104300 42 NDSIRER|HN 0.100 . PKNH_0104300 47 ERHNDLR|MK 0.113 . PKNH_0104300 49 HNDLRMK|HN 0.077 . PKNH_0104300 70 AASAEAK|LI 0.080 . PKNH_0104300 73 AEAKLIK|DM 0.077 . PKNH_0104300 95 YFTISTK|SK 0.071 . PKNH_0104300 97 TISTKSK|IE 0.096 . PKNH_0104300 120 FELGPIR|RG 0.073 . PKNH_0104300 121 ELGPIRR|GD 0.182 . PKNH_0104300 131 TVFEFTR|VV 0.113 . PKNH_0104300 150 SACCGNR|GV 0.114 . PKNH_0104300 156 RGVLICK|YD 0.060 . PKNH_0104300 190 AFAPEQR|RP 0.092 . PKNH_0104300 191 FAPEQRR|PG 0.091 . ____________________________^_________________

  • Fasta :-

    >PKNH_0104300 ATGGTGGACAGACGCCTGCATTACCTTTTTGCCCTATTTTGCTTCTTATACCTTTCGCGC ATCTCCTCGTGTAAAGCAGTGGCTGGAAGTTTTTGCTCTTTTAACAATGATTCCATTAGA GAAAGACACAATGATTTGCGGATGAAGCATAACGCCGATCCGTTGCACTGGAGCACACAT TTAGAAGAGGCTGCAAGCGCTGAAGCCAAACTGATAAAGGACATGTCCAATTGCACTGTC CTGGTGAACCAAATAAACACAAATTATTTTACAATTTCGACCAAGAGCAAAATTGAATCA GCAGTCGATACATGGTATGAAGGCATTAACAACTATGACTTTGAGTTAGGACCCATCCGC CGGGGGGATGACACAGTTTTTGAATTCACAAGGGTTGTATGGAACAGCGCTGAGCACATT GGATGTTCTAGTGCCTGTTGCGGTAACCGGGGGGTTTTAATTTGTAAATATGACAACAAC ACCAATCAGCCAGGTCATTTTGCCGATAACGTTGGGACGCTTGACCCAATGTTCGTTTGG GAAAATTTCGCATTCGCGCCAGAACAAAGACGACCAGGCAGTGAGACAAGTCAAAATGAT CTCCCCCCTTTGCCAATTTCATAA
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  • Fasta :-

    MVDRRLHYLFALFCFLYLSRISSCKAVAGSFCSFNNDSIRERHNDLRMKHNADPLHWSTH LEEAASAEAKLIKDMSNCTVLVNQINTNYFTISTKSKIESAVDTWYEGINNYDFELGPIR RGDDTVFEFTRVVWNSAEHIGCSSACCGNRGVLICKYDNNTNQPGHFADNVGTLDPMFVW ENFAFAPEQRRPGSETSQNDLPPLPIS

    No Results
No Results
No Results
IDSitePeptideScoreMethod
PKNH_010430096 SISTKSKIES0.996unsp

PKH_010430      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India