PKNH_0301800 | alpha/beta hydrolase, putative

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  • Curated_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
PKNH_0301800OTHER0.9971890.0006730.002138
No Results

  • Fasta :-

    >PKNH_0301800 MGNLLNSLIFRPHPPSYSRNRHDLHFFETKHGSKICGIFIDNKADTTILFSHANAEDIGD VVRFYQYRLRRLGLNLFAYDYSGYGHSSGHPTEAHVYNDVEAAYDYLVKVLRVPRHSIIA YGRSLGSAASVHIATKKNLLGLILQAPLASIHRVKLKLKFTLPYDSFCNIDKVHMINCPI LFIHGTKDKLLSYHGTEEMIRRTNVNTYFMFIEGGGHNDLDSSYGNQVYAALVAFLYVLK NNIRENVNSVYDISNVNMMKLRNMFISNNTKNMKERVKEKKRKGEENGMVSGSAGSVNGR QGNRNESRGSNEVLNSFMSNMERWYTDESIFRVYTKDSGYDSSQSLSSVLGSAESTMRHI PDNTFYESDTNISIEDLCRLAGGKNNLNRSKLYNGKDSGASCSSFTKRGWIDRSDGAVGN HRNGHRGVSRERYPDGRRIDSKDGRDRSRMKVCSSYVYNPARRENISPSNMDHSSSQCSR SDVYMGSEQDLAQRGNGTCMGGSSSEKVNSRRSGESRNIYSVDRVPRISQDMKSVGSSPV SERGSYARSYEQCNNGREETTIRGHRNGEQYSSESRKGGGNMNPSKASLASVSSNDSKIS SVGRGPFKEERAKVMNESRRNMQSDTIKQGSSVVKEGCATSEHVYSKNYYKKEGNRIRKE MENKITDINNQKINRYNEFIYGNQENKMGDCPNEIMEPVQREVSSASSSTLNNLNSLFAY
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_0301800.fa Sequence name : PKNH_0301800 Sequence length : 720 VALUES OF COMPUTED PARAMETERS Coef20 : 3.652 CoefTot : -0.939 ChDiff : 23 ZoneTo : 22 KR : 3 DE : 0 CleavSite : 13 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.900 1.182 0.020 0.536 MesoH : -0.468 0.516 -0.360 0.222 MuHd_075 : 28.383 19.898 7.048 7.277 MuHd_095 : 23.711 17.635 5.563 6.493 MuHd_100 : 17.267 15.597 5.374 4.448 MuHd_105 : 11.626 12.174 5.507 2.845 Hmax_075 : 7.117 7.933 -0.556 3.827 Hmax_095 : 8.900 15.400 0.081 4.240 Hmax_100 : 13.500 11.200 1.943 4.660 Hmax_105 : 12.700 10.400 -1.553 4.960 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.3498 0.6502 DFMC : 0.4872 0.5128 This protein is probably imported in mitochondria. f(Ser) = 0.1364 f(Arg) = 0.1364 CMi = 0.52265 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 720 PKNH_0301800 MGNLLNSLIFRPHPPSYSRNRHDLHFFETKHGSKICGIFIDNKADTTILFSHANAEDIGDVVRFYQYRLRRLGLNLFAYD 80 YSGYGHSSGHPTEAHVYNDVEAAYDYLVKVLRVPRHSIIAYGRSLGSAASVHIATKKNLLGLILQAPLASIHRVKLKLKF 160 TLPYDSFCNIDKVHMINCPILFIHGTKDKLLSYHGTEEMIRRTNVNTYFMFIEGGGHNDLDSSYGNQVYAALVAFLYVLK 240 NNIRENVNSVYDISNVNMMKLRNMFISNNTKNMKERVKEKKRKGEENGMVSGSAGSVNGRQGNRNESRGSNEVLNSFMSN 320 MERWYTDESIFRVYTKDSGYDSSQSLSSVLGSAESTMRHIPDNTFYESDTNISIEDLCRLAGGKNNLNRSKLYNGKDSGA 400 SCSSFTKRGWIDRSDGAVGNHRNGHRGVSRERYPDGRRIDSKDGRDRSRMKVCSSYVYNPARRENISPSNMDHSSSQCSR 480 SDVYMGSEQDLAQRGNGTCMGGSSSEKVNSRRSGESRNIYSVDRVPRISQDMKSVGSSPVSERGSYARSYEQCNNGREET 560 TIRGHRNGEQYSSESRKGGGNMNPSKASLASVSSNDSKISSVGRGPFKEERAKVMNESRRNMQSDTIKQGSSVVKEGCAT 640 SEHVYSKNYYKKEGNRIRKEMENKITDINNQKINRYNEFIYGNQENKMGDCPNEIMEPVQREVSSASSSTLNNLNSLFAY 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_0301800 11 LNSLIFR|PH 0.092 . PKNH_0301800 19 HPPSYSR|NR 0.079 . PKNH_0301800 21 PSYSRNR|HD 0.101 . PKNH_0301800 30 LHFFETK|HG 0.074 . PKNH_0301800 34 ETKHGSK|IC 0.064 . PKNH_0301800 43 GIFIDNK|AD 0.068 . PKNH_0301800 63 DIGDVVR|FY 0.090 . PKNH_0301800 68 VRFYQYR|LR 0.095 . PKNH_0301800 70 FYQYRLR|RL 0.087 . PKNH_0301800 71 YQYRLRR|LG 0.213 . PKNH_0301800 109 AYDYLVK|VL 0.058 . PKNH_0301800 112 YLVKVLR|VP 0.079 . PKNH_0301800 115 KVLRVPR|HS 0.235 . PKNH_0301800 123 SIIAYGR|SL 0.168 . PKNH_0301800 136 SVHIATK|KN 0.062 . PKNH_0301800 137 VHIATKK|NL 0.094 . PKNH_0301800 153 PLASIHR|VK 0.073 . PKNH_0301800 155 ASIHRVK|LK 0.058 . PKNH_0301800 157 IHRVKLK|LK 0.072 . PKNH_0301800 159 RVKLKLK|FT 0.068 . PKNH_0301800 172 SFCNIDK|VH 0.056 . PKNH_0301800 187 LFIHGTK|DK 0.066 . PKNH_0301800 189 IHGTKDK|LL 0.074 . PKNH_0301800 201 GTEEMIR|RT 0.076 . PKNH_0301800 202 TEEMIRR|TN 0.128 . PKNH_0301800 240 AFLYVLK|NN 0.057 . PKNH_0301800 244 VLKNNIR|EN 0.075 . PKNH_0301800 260 SNVNMMK|LR 0.061 . PKNH_0301800 262 VNMMKLR|NM 0.107 . PKNH_0301800 271 FISNNTK|NM 0.059 . PKNH_0301800 274 NNTKNMK|ER 0.058 . PKNH_0301800 276 TKNMKER|VK 0.190 . PKNH_0301800 278 NMKERVK|EK 0.062 . PKNH_0301800 280 KERVKEK|KR 0.079 . PKNH_0301800 281 ERVKEKK|RK 0.152 . PKNH_0301800 282 RVKEKKR|KG 0.205 . PKNH_0301800 283 VKEKKRK|GE 0.135 . PKNH_0301800 300 AGSVNGR|QG 0.101 . PKNH_0301800 304 NGRQGNR|NE 0.082 . PKNH_0301800 308 GNRNESR|GS 0.165 . PKNH_0301800 323 FMSNMER|WY 0.094 . PKNH_0301800 332 TDESIFR|VY 0.073 . PKNH_0301800 336 IFRVYTK|DS 0.081 . PKNH_0301800 358 SAESTMR|HI 0.099 . PKNH_0301800 379 SIEDLCR|LA 0.101 . PKNH_0301800 384 CRLAGGK|NN 0.053 . PKNH_0301800 389 GKNNLNR|SK 0.165 . PKNH_0301800 391 NNLNRSK|LY 0.063 . PKNH_0301800 396 SKLYNGK|DS 0.087 . PKNH_0301800 407 SCSSFTK|RG 0.064 . PKNH_0301800 408 CSSFTKR|GW 0.328 . PKNH_0301800 413 KRGWIDR|SD 0.305 . PKNH_0301800 422 GAVGNHR|NG 0.084 . PKNH_0301800 426 NHRNGHR|GV 0.145 . PKNH_0301800 430 GHRGVSR|ER 0.092 . PKNH_0301800 432 RGVSRER|YP 0.084 . PKNH_0301800 437 ERYPDGR|RI 0.095 . PKNH_0301800 438 RYPDGRR|ID 0.101 . PKNH_0301800 442 GRRIDSK|DG 0.086 . PKNH_0301800 445 IDSKDGR|DR 0.137 . PKNH_0301800 447 SKDGRDR|SR 0.144 . PKNH_0301800 449 DGRDRSR|MK 0.076 . PKNH_0301800 451 RDRSRMK|VC 0.068 . PKNH_0301800 462 YVYNPAR|RE 0.088 . PKNH_0301800 463 VYNPARR|EN 0.099 . PKNH_0301800 480 SSSQCSR|SD 0.155 . PKNH_0301800 494 EQDLAQR|GN 0.102 . PKNH_0301800 507 GGSSSEK|VN 0.064 . PKNH_0301800 511 SEKVNSR|RS 0.106 . PKNH_0301800 512 EKVNSRR|SG 0.176 . PKNH_0301800 517 RRSGESR|NI 0.143 . PKNH_0301800 524 NIYSVDR|VP 0.085 . PKNH_0301800 527 SVDRVPR|IS 0.244 . PKNH_0301800 533 RISQDMK|SV 0.185 . PKNH_0301800 543 SSPVSER|GS 0.091 . PKNH_0301800 548 ERGSYAR|SY 0.241 . PKNH_0301800 557 EQCNNGR|EE 0.089 . PKNH_0301800 563 REETTIR|GH 0.104 . PKNH_0301800 566 TTIRGHR|NG 0.204 . PKNH_0301800 576 QYSSESR|KG 0.094 . PKNH_0301800 577 YSSESRK|GG 0.158 . PKNH_0301800 586 GNMNPSK|AS 0.069 . PKNH_0301800 598 VSSNDSK|IS 0.085 . PKNH_0301800 604 KISSVGR|GP 0.154 . PKNH_0301800 608 VGRGPFK|EE 0.066 . PKNH_0301800 611 GPFKEER|AK 0.094 . PKNH_0301800 613 FKEERAK|VM 0.065 . PKNH_0301800 619 KVMNESR|RN 0.088 . PKNH_0301800 620 VMNESRR|NM 0.114 . PKNH_0301800 628 MQSDTIK|QG 0.080 . PKNH_0301800 635 QGSSVVK|EG 0.072 . PKNH_0301800 647 SEHVYSK|NY 0.084 . PKNH_0301800 651 YSKNYYK|KE 0.069 . PKNH_0301800 652 SKNYYKK|EG 0.137 . PKNH_0301800 656 YKKEGNR|IR 0.076 . PKNH_0301800 658 KEGNRIR|KE 0.089 . PKNH_0301800 659 EGNRIRK|EM 0.277 . PKNH_0301800 664 RKEMENK|IT 0.070 . PKNH_0301800 672 TDINNQK|IN 0.065 . PKNH_0301800 675 NNQKINR|YN 0.107 . PKNH_0301800 687 YGNQENK|MG 0.061 . PKNH_0301800 701 IMEPVQR|EV 0.120 . ____________________________^_________________

  • Fasta :-

    >PKNH_0301800 ATGGGGAATTTGCTAAACAGTTTAATTTTCCGGCCACACCCGCCGAGCTATTCGAGGAAC CGACATGATCTTCATTTTTTCGAAACGAAGCATGGTAGTAAGATATGCGGAATCTTCATT GACAACAAGGCGGATACAACCATTTTATTTAGTCATGCAAATGCAGAAGATATAGGAGAT GTAGTACGATTTTATCAGTATCGCCTGAGACGACTAGGATTGAATCTATTTGCCTATGAC TATAGTGGCTATGGGCACAGTTCAGGTCATCCCACTGAAGCGCATGTGTACAATGATGTA GAAGCAGCCTATGATTATCTAGTGAAGGTGTTACGTGTTCCAAGGCATAGCATAATAGCT TATGGAAGGAGTTTGGGTTCAGCTGCATCTGTCCATATAGCAACAAAGAAGAACTTGTTA GGTTTAATTCTTCAAGCTCCATTGGCATCTATACATCGGGTTAAGTTAAAACTAAAGTTT ACCCTACCTTATGATTCCTTTTGCAATATTGATAAGGTACACATGATTAACTGTCCCATT CTATTTATCCATGGAACGAAGGATAAGCTTCTTTCCTACCATGGCACAGAAGAAATGATT CGAAGGACAAATGTTAATACGTATTTTATGTTCATAGAAGGAGGAGGTCATAACGATTTG GATAGTAGCTATGGAAACCAAGTGTATGCTGCGTTAGTAGCTTTCCTTTATGTACTAAAA AATAATATAAGAGAAAATGTAAACAGTGTATATGACATATCAAATGTGAACATGATGAAA TTAAGGAACATGTTCATTTCGAATAATACGAAGAACATGAAGGAAAGAGTGAAAGAGAAG AAGAGGAAGGGAGAGGAGAATGGAATGGTGAGTGGTTCTGCGGGAAGTGTAAATGGAAGA CAGGGTAATAGGAATGAAAGTAGAGGAAGTAATGAAGTATTAAATTCGTTCATGAGTAAT ATGGAAAGATGGTATACGGATGAAAGTATATTTAGGGTTTATACAAAGGATTCAGGTTAT GATTCATCACAAAGTCTTAGTAGTGTTTTAGGTTCTGCCGAATCTACTATGAGGCACATA CCAGATAATACGTTTTATGAAAGTGACACGAACATTAGCATTGAAGATCTGTGTAGATTG GCTGGTGGGAAGAATAACTTAAATAGGAGTAAATTGTATAACGGTAAGGACAGTGGTGCT TCGTGTAGCTCATTTACGAAACGTGGTTGGATAGACAGAAGTGATGGTGCTGTAGGTAAC CATCGGAATGGACATCGAGGAGTTAGTAGAGAACGTTACCCCGATGGTAGACGAATTGAC AGTAAAGATGGTCGGGACAGAAGTCGTATGAAGGTGTGCTCAAGTTATGTGTACAACCCG GCGAGGAGAGAAAACATATCCCCCTCGAATATGGACCATAGTTCAAGCCAATGTAGCCGC AGTGATGTATATATGGGTAGTGAACAGGACTTGGCGCAACGAGGGAATGGTACCTGCATG GGTGGCAGCTCCTCTGAAAAAGTGAACTCCCGAAGGTCAGGAGAGAGTCGAAATATTTAC TCGGTGGATAGGGTTCCTAGGATTTCGCAGGATATGAAGAGTGTTGGCTCCTCCCCCGTG AGTGAAAGAGGAAGTTATGCACGCAGCTATGAGCAGTGTAATAACGGAAGGGAAGAGACT ACCATTAGGGGGCATAGAAATGGAGAGCAATATTCAAGTGAATCAAGAAAAGGTGGAGGA AATATGAACCCAAGTAAGGCAAGTCTGGCAAGTGTTTCATCCAATGATAGCAAAATCAGC AGTGTGGGCAGAGGACCCTTCAAGGAGGAGAGGGCCAAGGTGATGAATGAAAGTAGAAGG AATATGCAAAGCGATACTATTAAGCAGGGTAGTAGTGTTGTAAAAGAAGGATGTGCCACG AGCGAACATGTGTACTCAAAGAATTATTACAAAAAAGAAGGAAACAGGATACGCAAGGAA ATGGAGAATAAAATAACCGACATTAATAATCAAAAGATTAACAGATACAATGAATTTATC TACGGAAATCAGGAGAACAAAATGGGTGATTGTCCGAACGAGATTATGGAACCTGTACAG AGGGAAGTGTCTTCAGCTAGCAGCAGTACTTTGAATAATTTGAATTCGCTATTTGCCTAC TAA
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  • Fasta :-

    MGNLLNSLIFRPHPPSYSRNRHDLHFFETKHGSKICGIFIDNKADTTILFSHANAEDIGD VVRFYQYRLRRLGLNLFAYDYSGYGHSSGHPTEAHVYNDVEAAYDYLVKVLRVPRHSIIA YGRSLGSAASVHIATKKNLLGLILQAPLASIHRVKLKLKFTLPYDSFCNIDKVHMINCPI LFIHGTKDKLLSYHGTEEMIRRTNVNTYFMFIEGGGHNDLDSSYGNQVYAALVAFLYVLK NNIRENVNSVYDISNVNMMKLRNMFISNNTKNMKERVKEKKRKGEENGMVSGSAGSVNGR QGNRNESRGSNEVLNSFMSNMERWYTDESIFRVYTKDSGYDSSQSLSSVLGSAESTMRHI PDNTFYESDTNISIEDLCRLAGGKNNLNRSKLYNGKDSGASCSSFTKRGWIDRSDGAVGN HRNGHRGVSRERYPDGRRIDSKDGRDRSRMKVCSSYVYNPARRENISPSNMDHSSSQCSR SDVYMGSEQDLAQRGNGTCMGGSSSEKVNSRRSGESRNIYSVDRVPRISQDMKSVGSSPV SERGSYARSYEQCNNGREETTIRGHRNGEQYSSESRKGGGNMNPSKASLASVSSNDSKIS SVGRGPFKEERAKVMNESRRNMQSDTIKQGSSVVKEGCATSEHVYSKNYYKKEGNRIRKE MENKITDINNQKINRYNEFIYGNQENKMGDCPNEIMEPVQREVSSASSSTLNNLNSLFAY

    No Results
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No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PKNH_0301800249 SENVNSVYDI0.992unspPKNH_0301800249 SENVNSVYDI0.992unspPKNH_0301800249 SENVNSVYDI0.992unspPKNH_0301800307 SNRNESRGSN0.995unspPKNH_0301800338 SYTKDSGYDS0.995unspPKNH_0301800373 SDTNISIEDL0.996unspPKNH_0301800429 SHRGVSRERY0.997unspPKNH_0301800467 SRENISPSNM0.994unspPKNH_0301800510 SEKVNSRRSG0.994unspPKNH_0301800513 SNSRRSGESR0.993unspPKNH_0301800538 SSVGSSPVSE0.992unspPKNH_0301800541 SSSPVSERGS0.995unspPKNH_0301800575 SYSSESRKGG0.992unspPKNH_030180016 SPHPPSYSRN0.994unspPKNH_0301800117 SVPRHSIIAY0.993unsp

PK4_0210c      PKH_031090      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India