PKNH_0306900 | tRNA N6-adenosine threonylcarbamoyltransferase, putative

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_IDPredictionOTHERSPmTPCS_Position
PKNH_0306900SP0.4885350.5100000.001465CS pos: 25-26. HYA-YK. Pr: 0.4548
No Results

  • Fasta :-

    >PKNH_0306900 MKNAIKNLAIYLPCVLSLLLYVHYAYKIDNITIKRGQFSDTLERTVHKINKRVQKDSVTH YDVCQYKKIPKILTERNKFKDSQKVKYIVGIENTCDDTCICILDSNLKIVKNVIISHFKV VHEYEGVYPFFISSINQFFLKPYMEKTLEGIDERLICCFAFSACPGIAKSMEAAKNYIGE KKKQNGSIQVSPINHVFAHVLSPLFFHVYDDKNTYTNSGQYKEGKRDQVEKELCIDMHIS EEVRKDKTQMEKVKDILHILNSNDVTKQKMEFLSEDKFLNCGNYVLRGEMNKEAPQSVES QAQQNVAYTRKTTSSSHKTQYSEDAPQRSYLTDGYICALLSGGSTQIYKVQKNKKNDINL CKLSQTVDISIGDIIDKVARLLGLPVGLGGGPFLERKAEEFIKRMKEEHLSGEACADPFQ PFPVPFSANNRIDFSFSGIYNHVRKIIEELKKGESFEREKDRYAYFLQKNIFNHLLTQIN KIMYFSELHFNVKELFIVGGVGCNNFLITELKNMAMKRSQLPFQLNEFKKLKKRLSKKIK KISEKNILRSKVSKEVLKGEIEFSASLNWDVYLKFLLKRKTEQDILSALECFNFEDFSKL KEEGHFLLEGHSPFSKSEMPWSVHKTPLNLSRDNAAMICFSAFLNLHNKSHIYEDVSQIE IKPTVKTQVENNFLLFSDIIIFDVFLHQFGAQGG
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_0306900.fa Sequence name : PKNH_0306900 Sequence length : 694 VALUES OF COMPUTED PARAMETERS Coef20 : 4.323 CoefTot : -0.460 ChDiff : 16 ZoneTo : 28 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.412 1.824 0.368 0.672 MesoH : -0.547 0.513 -0.321 0.259 MuHd_075 : 27.710 23.239 10.715 6.349 MuHd_095 : 26.038 19.472 6.956 6.386 MuHd_100 : 26.524 24.035 7.916 7.145 MuHd_105 : 24.264 22.201 7.592 6.114 Hmax_075 : 17.733 24.850 6.252 6.895 Hmax_095 : 19.100 25.700 4.451 7.520 Hmax_100 : 19.100 25.700 4.451 7.520 Hmax_105 : 8.487 23.450 1.577 4.920 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5052 0.4948 DFMC : 0.6408 0.3592
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 694 PKNH_0306900 MKNAIKNLAIYLPCVLSLLLYVHYAYKIDNITIKRGQFSDTLERTVHKINKRVQKDSVTHYDVCQYKKIPKILTERNKFK 80 DSQKVKYIVGIENTCDDTCICILDSNLKIVKNVIISHFKVVHEYEGVYPFFISSINQFFLKPYMEKTLEGIDERLICCFA 160 FSACPGIAKSMEAAKNYIGEKKKQNGSIQVSPINHVFAHVLSPLFFHVYDDKNTYTNSGQYKEGKRDQVEKELCIDMHIS 240 EEVRKDKTQMEKVKDILHILNSNDVTKQKMEFLSEDKFLNCGNYVLRGEMNKEAPQSVESQAQQNVAYTRKTTSSSHKTQ 320 YSEDAPQRSYLTDGYICALLSGGSTQIYKVQKNKKNDINLCKLSQTVDISIGDIIDKVARLLGLPVGLGGGPFLERKAEE 400 FIKRMKEEHLSGEACADPFQPFPVPFSANNRIDFSFSGIYNHVRKIIEELKKGESFEREKDRYAYFLQKNIFNHLLTQIN 480 KIMYFSELHFNVKELFIVGGVGCNNFLITELKNMAMKRSQLPFQLNEFKKLKKRLSKKIKKISEKNILRSKVSKEVLKGE 560 IEFSASLNWDVYLKFLLKRKTEQDILSALECFNFEDFSKLKEEGHFLLEGHSPFSKSEMPWSVHKTPLNLSRDNAAMICF 640 SAFLNLHNKSHIYEDVSQIEIKPTVKTQVENNFLLFSDIIIFDVFLHQFGAQGG 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ...................................................... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_0306900 2 -----MK|NA 0.077 . PKNH_0306900 6 -MKNAIK|NL 0.065 . PKNH_0306900 27 YVHYAYK|ID 0.059 . PKNH_0306900 34 IDNITIK|RG 0.062 . PKNH_0306900 35 DNITIKR|GQ 0.115 . PKNH_0306900 44 FSDTLER|TV 0.106 . PKNH_0306900 48 LERTVHK|IN 0.071 . PKNH_0306900 51 TVHKINK|RV 0.085 . PKNH_0306900 52 VHKINKR|VQ 0.149 . PKNH_0306900 55 INKRVQK|DS 0.245 . PKNH_0306900 67 YDVCQYK|KI 0.073 . PKNH_0306900 68 DVCQYKK|IP 0.070 . PKNH_0306900 71 QYKKIPK|IL 0.061 . PKNH_0306900 76 PKILTER|NK 0.070 . PKNH_0306900 78 ILTERNK|FK 0.066 . PKNH_0306900 80 TERNKFK|DS 0.101 . PKNH_0306900 84 KFKDSQK|VK 0.063 . PKNH_0306900 86 KDSQKVK|YI 0.126 . PKNH_0306900 108 ILDSNLK|IV 0.068 . PKNH_0306900 111 SNLKIVK|NV 0.073 . PKNH_0306900 119 VIISHFK|VV 0.080 . PKNH_0306900 141 INQFFLK|PY 0.068 . PKNH_0306900 146 LKPYMEK|TL 0.068 . PKNH_0306900 154 LEGIDER|LI 0.077 . PKNH_0306900 169 ACPGIAK|SM 0.086 . PKNH_0306900 175 KSMEAAK|NY 0.069 . PKNH_0306900 181 KNYIGEK|KK 0.060 . PKNH_0306900 182 NYIGEKK|KQ 0.094 . PKNH_0306900 183 YIGEKKK|QN 0.153 . PKNH_0306900 212 FHVYDDK|NT 0.063 . PKNH_0306900 222 TNSGQYK|EG 0.075 . PKNH_0306900 225 GQYKEGK|RD 0.064 . PKNH_0306900 226 QYKEGKR|DQ 0.166 . PKNH_0306900 231 KRDQVEK|EL 0.078 . PKNH_0306900 244 HISEEVR|KD 0.092 . PKNH_0306900 245 ISEEVRK|DK 0.134 . PKNH_0306900 247 EEVRKDK|TQ 0.150 . PKNH_0306900 252 DKTQMEK|VK 0.055 . PKNH_0306900 254 TQMEKVK|DI 0.110 . PKNH_0306900 267 NSNDVTK|QK 0.074 . PKNH_0306900 269 NDVTKQK|ME 0.069 . PKNH_0306900 277 EFLSEDK|FL 0.057 . PKNH_0306900 287 CGNYVLR|GE 0.098 . PKNH_0306900 292 LRGEMNK|EA 0.079 . PKNH_0306900 310 QNVAYTR|KT 0.086 . PKNH_0306900 311 NVAYTRK|TT 0.101 . PKNH_0306900 318 TTSSSHK|TQ 0.070 . PKNH_0306900 328 SEDAPQR|SY 0.111 . PKNH_0306900 349 GSTQIYK|VQ 0.057 . PKNH_0306900 352 QIYKVQK|NK 0.061 . PKNH_0306900 354 YKVQKNK|KN 0.071 . PKNH_0306900 355 KVQKNKK|ND 0.089 . PKNH_0306900 362 NDINLCK|LS 0.064 . PKNH_0306900 377 IGDIIDK|VA 0.058 . PKNH_0306900 380 IIDKVAR|LL 0.090 . PKNH_0306900 396 GGPFLER|KA 0.101 . PKNH_0306900 397 GPFLERK|AE 0.088 . PKNH_0306900 403 KAEEFIK|RM 0.059 . PKNH_0306900 404 AEEFIKR|MK 0.249 . PKNH_0306900 406 EFIKRMK|EE 0.061 . PKNH_0306900 431 PFSANNR|ID 0.076 . PKNH_0306900 444 GIYNHVR|KI 0.107 . PKNH_0306900 445 IYNHVRK|II 0.117 . PKNH_0306900 451 KIIEELK|KG 0.060 . PKNH_0306900 452 IIEELKK|GE 0.092 . PKNH_0306900 458 KGESFER|EK 0.082 . PKNH_0306900 460 ESFEREK|DR 0.068 . PKNH_0306900 462 FEREKDR|YA 0.141 . PKNH_0306900 469 YAYFLQK|NI 0.071 . PKNH_0306900 481 LLTQINK|IM 0.061 . PKNH_0306900 493 ELHFNVK|EL 0.073 . PKNH_0306900 512 FLITELK|NM 0.060 . PKNH_0306900 517 LKNMAMK|RS 0.059 . PKNH_0306900 518 KNMAMKR|SQ 0.318 . PKNH_0306900 529 FQLNEFK|KL 0.058 . PKNH_0306900 530 QLNEFKK|LK 0.089 . PKNH_0306900 532 NEFKKLK|KR 0.055 . PKNH_0306900 533 EFKKLKK|RL 0.112 . PKNH_0306900 534 FKKLKKR|LS 0.190 . PKNH_0306900 537 LKKRLSK|KI 0.132 . PKNH_0306900 538 KKRLSKK|IK 0.142 . PKNH_0306900 540 RLSKKIK|KI 0.095 . PKNH_0306900 541 LSKKIKK|IS 0.119 . PKNH_0306900 545 IKKISEK|NI 0.068 . PKNH_0306900 549 SEKNILR|SK 0.108 . PKNH_0306900 551 KNILRSK|VS 0.064 . PKNH_0306900 554 LRSKVSK|EV 0.159 . PKNH_0306900 558 VSKEVLK|GE 0.061 . PKNH_0306900 574 NWDVYLK|FL 0.058 . PKNH_0306900 578 YLKFLLK|RK 0.054 . PKNH_0306900 579 LKFLLKR|KT 0.195 . PKNH_0306900 580 KFLLKRK|TE 0.079 . PKNH_0306900 599 NFEDFSK|LK 0.063 . PKNH_0306900 601 EDFSKLK|EE 0.066 . PKNH_0306900 616 GHSPFSK|SE 0.085 . PKNH_0306900 625 MPWSVHK|TP 0.056 . PKNH_0306900 632 TPLNLSR|DN 0.130 . PKNH_0306900 649 FLNLHNK|SH 0.078 . PKNH_0306900 662 VSQIEIK|PT 0.070 . PKNH_0306900 666 EIKPTVK|TQ 0.053 . ____________________________^_________________

  • Fasta :-

    >PKNH_0306900 ATGAAAAATGCGATTAAAAACCTGGCCATTTATTTACCTTGCGTCCTGAGCCTCCTTCTA TACGTACATTATGCCTACAAGATTGACAACATAACCATTAAAAGAGGGCAATTTAGTGAC ACCTTGGAAAGGACAGTACACAAAATTAATAAACGCGTCCAGAAGGACAGTGTCACACAC TATGACGTATGCCAGTATAAAAAAATCCCTAAAATTTTAACCGAAAGAAATAAGTTCAAA GATTCACAAAAAGTGAAATACATCGTAGGAATTGAAAATACATGTGATGATACTTGCATC TGCATCCTTGACTCGAACTTGAAAATTGTTAAAAATGTTATTATATCTCATTTTAAGGTG GTTCACGAATATGAGGGCGTGTATCCCTTTTTTATCAGCTCCATCAACCAGTTTTTTTTG AAACCCTACATGGAGAAGACTCTCGAGGGAATTGATGAGAGGCTAATCTGCTGTTTCGCC TTCAGTGCTTGCCCGGGAATAGCTAAAAGTATGGAAGCAGCAAAAAACTACATAGGAGAG AAGAAGAAGCAAAACGGAAGCATACAAGTAAGTCCGATCAATCATGTTTTTGCTCATGTC CTTTCCCCTCTCTTTTTCCACGTCTACGACGATAAAAATACATACACGAATAGTGGCCAG TACAAGGAAGGAAAAAGAGACCAAGTGGAAAAGGAACTTTGTATCGACATGCACATCTCG GAGGAGGTCAGAAAGGATAAGACACAAATGGAAAAGGTGAAAGACATTCTGCATATTCTT AATAGCAATGATGTGACGAAGCAGAAGATGGAATTTTTGAGCGAAGATAAATTTCTAAAC TGCGGCAATTATGTTCTCAGGGGAGAGATGAACAAAGAGGCACCCCAAAGTGTGGAAAGT CAGGCACAACAAAACGTAGCCTACACGCGAAAGACCACCTCCTCTTCGCACAAAACGCAG TATAGTGAGGACGCACCACAGAGAAGCTACTTGACAGATGGATATATATGCGCATTACTT TCCGGAGGAAGTACACAAATTTACAAAGTTCAAAAGAACAAAAAAAACGACATTAATTTA TGCAAGCTATCCCAAACGGTCGATATTTCCATTGGAGACATAATTGACAAAGTTGCCAGG CTACTGGGGCTGCCGGTTGGATTAGGGGGAGGTCCCTTCCTTGAAAGGAAGGCAGAAGAG TTCATTAAAAGAATGAAGGAGGAGCATCTAAGTGGGGAGGCTTGCGCGGATCCATTTCAG CCCTTTCCCGTTCCCTTCTCGGCAAATAACCGAATTGATTTTTCCTTCTCAGGCATATAC AACCATGTGCGCAAAATCATCGAGGAATTAAAAAAAGGAGAATCCTTCGAGCGCGAAAAA GACAGGTATGCCTACTTCCTACAGAAGAATATTTTCAATCACCTCTTGACGCAGATTAAC AAAATTATGTACTTTTCAGAGTTGCATTTCAATGTAAAAGAATTATTCATAGTGGGGGGA GTTGGATGCAACAATTTCCTGATCACTGAGTTGAAAAACATGGCTATGAAGAGAAGTCAA TTGCCATTTCAGTTAAATGAGTTTAAAAAATTAAAAAAAAGGTTAAGTAAGAAGATAAAA AAAATAAGTGAAAAAAATATTTTACGTTCGAAAGTGTCCAAGGAAGTTCTCAAAGGGGAA ATTGAGTTCAGTGCATCCCTCAATTGGGATGTTTACTTAAAGTTTCTTCTAAAGAGGAAA ACGGAACAGGATATTTTGTCAGCTTTAGAATGTTTTAATTTTGAGGACTTTTCCAAACTG AAAGAGGAAGGTCATTTTCTGCTGGAGGGTCATTCCCCTTTCTCCAAAAGTGAAATGCCC TGGAGTGTGCACAAGACACCGCTCAACCTCAGCAGAGACAATGCGGCCATGATTTGTTTT AGTGCCTTTTTGAATTTGCACAACAAAAGCCATATCTATGAAGATGTATCTCAGATTGAA ATTAAACCAACGGTGAAGACACAGGTTGAAAATAATTTCCTCCTCTTTTCCGACATTATA ATTTTTGATGTGTTTCTGCATCAGTTTGGCGCACAAGGGGGGTGA
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  • Fasta :-

    MKNAIKNLAIYLPCVLSLLLYVHYAYKIDNITIKRGQFSDTLERTVHKINKRVQKDSVTH YDVCQYKKIPKILTERNKFKDSQKVKYIVGIENTCDDTCICILDSNLKIVKNVIISHFKV VHEYEGVYPFFISSINQFFLKPYMEKTLEGIDERLICCFAFSACPGIAKSMEAAKNYIGE KKKQNGSIQVSPINHVFAHVLSPLFFHVYDDKNTYTNSGQYKEGKRDQVEKELCIDMHIS EEVRKDKTQMEKVKDILHILNSNDVTKQKMEFLSEDKFLNCGNYVLRGEMNKEAPQSVES QAQQNVAYTRKTTSSSHKTQYSEDAPQRSYLTDGYICALLSGGSTQIYKVQKNKKNDINL CKLSQTVDISIGDIIDKVARLLGLPVGLGGGPFLERKAEEFIKRMKEEHLSGEACADPFQ PFPVPFSANNRIDFSFSGIYNHVRKIIEELKKGESFEREKDRYAYFLQKNIFNHLLTQIN KIMYFSELHFNVKELFIVGGVGCNNFLITELKNMAMKRSQLPFQLNEFKKLKKRLSKKIK KISEKNILRSKVSKEVLKGEIEFSASLNWDVYLKFLLKRKTEQDILSALECFNFEDFSKL KEEGHFLLEGHSPFSKSEMPWSVHKTPLNLSRDNAAMICFSAFLNLHNKSHIYEDVSQIE IKPTVKTQVENNFLLFSDIIIFDVFLHQFGAQGG

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PKNH_0306900455 SKKGESFERE0.992unspPKNH_0306900455 SKKGESFERE0.992unspPKNH_0306900455 SKKGESFERE0.992unspPKNH_0306900536 SKKRLSKKIK0.995unspPKNH_0306900543 SIKKISEKNI0.993unspPKNH_0306900615 SHSPFSKSEM0.995unspPKNH_0306900657 SYEDVSQIEI0.995unspPKNH_0306900297 SEAPQSVESQ0.992unspPKNH_0306900316 STTSSSHKTQ0.992unsp

PK4_0670w      PKH_030580      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India