PKNH_0317700 | ubiquitin C-terminal hydrolase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008270      

  • Computed_GO_Functions:  zinc ion binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PKNH_0317700OTHER0.9999690.0000220.000009
No Results

  • Fasta :-

    >PKNH_0317700 MFHLIVYTQEHSSHFNDFLTLFENVYDRNGNRISNHGEHPGGDNKGDTNDNTSTLDKRVS EERAPIKQKVSQDGGGGPKVHHFTSSFLQLYINDEKNFDLYLIDDNTNNESDNGGGAISV AVSGIGTEAPRQEVQKVSLDVAEDFAKDVAKDVAKDISPPTHKRGICGRENEDIKRNQRS SKKGGGKREKGTSVKRPKEGINQKDTHPHEDDKSRRVNLPLHRSHMLFILSLPTHFPFEH LYRLINAYTDFIVQIKVFHVRSNISFLDEEEYPREEFGGSFSTIGMNEDKHLIPVDTRSG KSSYGKQLDQYSRGSEGNPREEGACTCEVEGVVMHERIHSVVKRRLKKKKKIKSYSVMIF FKTQIYADMFYSEYHCANLNHLVESRKGEWQHNMVDKTSDKGYPDWYVYCAFVSLVYYIL DGEVGFPQVDAKVDAKVNAEVNAEVDAKMNAKMNAKMNAEVNAEVDVVSQVDEPPRQSDG NIIEHKKGQNEKHGRVNYLSSSGNNNLFDINYFETFQKGIVTDGNTCISTCPLCMELLCE EVCFTLTRSRKWHSRKKGKENQLYDYVNLSCNVCSVIFLYDSMSRLLGEHWGGQLVIGMA EGTRNCVSHCVENTVDHSTEDHRTCGEVLPGRDARSRLAHIVGTLKCRNCNNVDDIWLCL TCANIGCGRYQKSHAKFHSAMYNHHYCLNLKTKKVWNYMREAFIEDKMEDDHSELDNTWR GGKGPVNDDFGYNTFHPCVDAPLPGRGDFVDDEYELCYGDEREAGLEHITQPSHMDHTYY DDYYVHDMQDSYDSLIYNKIYDIFTDDAYISDGLKNELLYSLYSLLSHEAHLYNNSLIEL QCRYMNRVDLESRNIKSIRDTVSQIENQNRKMEIFLQKVESSIKAKNNERAQLQEKINFF RHLNSNIVSHRCATRATKREKEGRVVKDDDNDDDSRKIKRLDETITSLQAQVDELLRGL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_0317700.fa Sequence name : PKNH_0317700 Sequence length : 959 VALUES OF COMPUTED PARAMETERS Coef20 : 3.593 CoefTot : -0.429 ChDiff : -24 ZoneTo : 9 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.900 1.406 0.279 0.604 MesoH : -0.936 0.080 -0.415 0.160 MuHd_075 : 5.677 10.118 1.832 2.477 MuHd_095 : 15.477 5.547 4.899 1.192 MuHd_100 : 27.393 14.184 7.548 3.681 MuHd_105 : 32.911 19.194 8.550 5.488 Hmax_075 : 3.617 7.817 -2.451 3.733 Hmax_095 : 10.000 8.000 -0.033 3.330 Hmax_100 : 12.400 8.300 -0.033 3.950 Hmax_105 : 11.600 7.000 -0.055 3.360 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9813 0.0187 DFMC : 0.9847 0.0153
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 959 PKNH_0317700 MFHLIVYTQEHSSHFNDFLTLFENVYDRNGNRISNHGEHPGGDNKGDTNDNTSTLDKRVSEERAPIKQKVSQDGGGGPKV 80 HHFTSSFLQLYINDEKNFDLYLIDDNTNNESDNGGGAISVAVSGIGTEAPRQEVQKVSLDVAEDFAKDVAKDVAKDISPP 160 THKRGICGRENEDIKRNQRSSKKGGGKREKGTSVKRPKEGINQKDTHPHEDDKSRRVNLPLHRSHMLFILSLPTHFPFEH 240 LYRLINAYTDFIVQIKVFHVRSNISFLDEEEYPREEFGGSFSTIGMNEDKHLIPVDTRSGKSSYGKQLDQYSRGSEGNPR 320 EEGACTCEVEGVVMHERIHSVVKRRLKKKKKIKSYSVMIFFKTQIYADMFYSEYHCANLNHLVESRKGEWQHNMVDKTSD 400 KGYPDWYVYCAFVSLVYYILDGEVGFPQVDAKVDAKVNAEVNAEVDAKMNAKMNAKMNAEVNAEVDVVSQVDEPPRQSDG 480 NIIEHKKGQNEKHGRVNYLSSSGNNNLFDINYFETFQKGIVTDGNTCISTCPLCMELLCEEVCFTLTRSRKWHSRKKGKE 560 NQLYDYVNLSCNVCSVIFLYDSMSRLLGEHWGGQLVIGMAEGTRNCVSHCVENTVDHSTEDHRTCGEVLPGRDARSRLAH 640 IVGTLKCRNCNNVDDIWLCLTCANIGCGRYQKSHAKFHSAMYNHHYCLNLKTKKVWNYMREAFIEDKMEDDHSELDNTWR 720 GGKGPVNDDFGYNTFHPCVDAPLPGRGDFVDDEYELCYGDEREAGLEHITQPSHMDHTYYDDYYVHDMQDSYDSLIYNKI 800 YDIFTDDAYISDGLKNELLYSLYSLLSHEAHLYNNSLIELQCRYMNRVDLESRNIKSIRDTVSQIENQNRKMEIFLQKVE 880 SSIKAKNNERAQLQEKINFFRHLNSNIVSHRCATRATKREKEGRVVKDDDNDDDSRKIKRLDETITSLQAQVDELLRGL 960 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ............................................................................... 960 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0

  • Fasta :-

    >PKNH_0317700 ATGTTTCACCTAATCGTCTATACACAAGAGCATTCCAGCCATTTTAACGACTTTCTAACC CTGTTCGAAAATGTATACGATCGGAATGGGAACCGAATTTCAAACCATGGAGAACACCCT GGGGGAGACAACAAGGGTGATACCAATGATAATACGTCGACATTGGACAAAAGGGTGTCT GAAGAAAGGGCACCGATCAAGCAGAAGGTTTCTCAAGACGGGGGAGGGGGCCCAAAGGTT CATCATTTTACATCATCCTTTTTGCAACTTTACATAAATGACGAAAAGAATTTCGATTTA TACTTAATAGACGACAACACCAACAACGAAAGCGACAACGGAGGAGGAGCAATATCCGTG GCAGTATCGGGGATTGGCACGGAAGCCCCCCGCCAGGAAGTGCAAAAGGTCTCCCTCGAT GTTGCTGAGGATTTTGCTAAGGATGTTGCGAAGGATGTTGCGAAGGATATATCTCCTCCT ACCCATAAGAGGGGAATCTGCGGAAGGGAAAATGAAGACATAAAAAGGAATCAAAGGAGT AGCAAAAAAGGAGGAGGAAAACGAGAAAAAGGCACTTCCGTGAAAAGGCCAAAGGAAGGA ATTAATCAGAAGGATACTCACCCGCACGAGGATGATAAAAGCAGGAGAGTGAACCTACCT CTGCATCGGTCCCACATGCTATTCATTCTGTCGCTTCCGACACACTTCCCCTTCGAACAC CTCTACCGCTTGATCAATGCTTACACAGACTTCATCGTACAGATAAAGGTTTTCCATGTG CGCAGTAATATCTCCTTCTTGGATGAAGAGGAATATCCCAGAGAGGAGTTTGGAGGGAGT TTCTCCACCATTGGTATGAATGAAGACAAACATCTTATCCCGGTGGATACCCGCAGTGGA AAAAGTTCATACGGAAAGCAATTGGACCAGTACAGCAGGGGTAGTGAAGGCAACCCGCGT GAAGAGGGCGCCTGTACATGCGAAGTCGAAGGAGTGGTCATGCACGAACGAATACACAGC GTGGTAAAGAGGAGATTAAAAAAAAAAAAAAAAATTAAAAGTTACTCCGTGATGATTTTC TTCAAAACACAAATATACGCTGACATGTTTTATAGTGAGTACCACTGTGCAAATTTAAAT CATCTAGTGGAGAGTCGAAAAGGAGAGTGGCAGCACAACATGGTGGACAAAACGAGCGAC AAGGGGTATCCTGATTGGTATGTCTACTGCGCGTTCGTCAGTTTAGTGTACTACATTTTG GATGGAGAAGTGGGGTTCCCCCAGGTGGACGCAAAGGTAGACGCAAAGGTGAACGCAGAG GTGAATGCAGAGGTGGATGCAAAGATGAACGCAAAGATGAATGCAAAGATGAACGCAGAG GTGAATGCAGAGGTGGATGTGGTGTCCCAAGTAGATGAGCCTCCGCGGCAAAGCGACGGA AATATCATTGAGCATAAGAAGGGTCAGAACGAAAAACACGGGAGAGTGAATTACCTCTCC TCCAGTGGGAACAACAACCTATTCGACATAAATTACTTTGAGACCTTTCAAAAAGGTATA GTGACTGATGGAAACACGTGCATATCAACATGTCCACTTTGCATGGAGTTGCTTTGCGAG GAGGTGTGCTTTACCCTAACGAGGAGCAGAAAATGGCACTCCCGAAAAAAAGGGAAGGAG AACCAGCTGTACGATTATGTTAATTTATCCTGCAACGTATGCTCTGTGATATTTCTTTAC GATTCGATGTCTCGGTTGTTGGGCGAACATTGGGGGGGTCAATTGGTTATAGGTATGGCG GAGGGTACACGGAACTGTGTGTCACATTGCGTAGAAAATACCGTTGACCATAGTACTGAG GACCACAGAACTTGTGGTGAAGTGCTCCCCGGGAGAGATGCTCGGAGTAGGTTGGCACAT ATAGTAGGCACCCTCAAATGCAGAAACTGCAACAACGTTGACGACATATGGCTGTGCCTT ACATGCGCAAATATAGGATGTGGAAGGTATCAGAAGAGTCACGCGAAATTTCATAGCGCC ATGTATAACCATCATTACTGTCTCAACCTGAAGACGAAGAAAGTGTGGAATTACATGCGG GAGGCTTTTATTGAAGACAAGATGGAGGATGATCATAGTGAGTTGGATAATACCTGGCGT GGAGGTAAAGGCCCGGTTAACGATGACTTCGGTTATAATACTTTCCATCCATGTGTAGAT GCACCCCTCCCGGGGAGGGGTGACTTTGTGGACGATGAATATGAACTTTGCTACGGTGAC GAGAGGGAGGCAGGCCTAGAACACATCACCCAACCCAGTCACATGGATCACACATATTAC GACGACTACTATGTACATGACATGCAGGATAGTTATGATAGCCTTATTTACAATAAAATC TACGATATCTTCACAGACGATGCCTACATCAGTGATGGGCTCAAGAACGAACTCCTCTAC AGTTTGTACTCCCTACTATCCCACGAGGCACATCTTTACAACAATAGCCTCATCGAACTT CAATGTAGATACATGAATAGAGTGGACCTGGAAAGTAGGAACATAAAAAGCATACGAGAT ACTGTCAGTCAAATTGAAAATCAAAATAGAAAAATGGAGATTTTCCTCCAAAAGGTGGAG TCTTCCATTAAAGCAAAGAACAACGAAAGGGCGCAACTGCAGGAGAAGATAAACTTCTTC AGGCATCTCAACAGTAACATCGTTTCGCACCGGTGCGCTACGCGTGCAACGAAAAGGGAG AAAGAAGGTCGTGTCGTAAAGGACGACGACAATGATGATGACTCCAGGAAGATAAAGCGC CTCGACGAGACCATCACCTCCCTGCAGGCGCAGGTGGATGAGCTGCTGCGCGGGTTATAA
  • Download Fasta

  • Fasta :-

    MFHLIVYTQEHSSHFNDFLTLFENVYDRNGNRISNHGEHPGGDNKGDTNDNTSTLDKRVS EERAPIKQKVSQDGGGGPKVHHFTSSFLQLYINDEKNFDLYLIDDNTNNESDNGGGAISV AVSGIGTEAPRQEVQKVSLDVAEDFAKDVAKDVAKDISPPTHKRGICGRENEDIKRNQRS SKKGGGKREKGTSVKRPKEGINQKDTHPHEDDKSRRVNLPLHRSHMLFILSLPTHFPFEH LYRLINAYTDFIVQIKVFHVRSNISFLDEEEYPREEFGGSFSTIGMNEDKHLIPVDTRSG KSSYGKQLDQYSRGSEGNPREEGACTCEVEGVVMHERIHSVVKRRLKKKKKIKSYSVMIF FKTQIYADMFYSEYHCANLNHLVESRKGEWQHNMVDKTSDKGYPDWYVYCAFVSLVYYIL DGEVGFPQVDAKVDAKVNAEVNAEVDAKMNAKMNAKMNAEVNAEVDVVSQVDEPPRQSDG NIIEHKKGQNEKHGRVNYLSSSGNNNLFDINYFETFQKGIVTDGNTCISTCPLCMELLCE EVCFTLTRSRKWHSRKKGKENQLYDYVNLSCNVCSVIFLYDSMSRLLGEHWGGQLVIGMA EGTRNCVSHCVENTVDHSTEDHRTCGEVLPGRDARSRLAHIVGTLKCRNCNNVDDIWLCL TCANIGCGRYQKSHAKFHSAMYNHHYCLNLKTKKVWNYMREAFIEDKMEDDHSELDNTWR GGKGPVNDDFGYNTFHPCVDAPLPGRGDFVDDEYELCYGDEREAGLEHITQPSHMDHTYY DDYYVHDMQDSYDSLIYNKIYDIFTDDAYISDGLKNELLYSLYSLLSHEAHLYNNSLIEL QCRYMNRVDLESRNIKSIRDTVSQIENQNRKMEIFLQKVESSIKAKNNERAQLQEKINFF RHLNSNIVSHRCATRATKREKEGRVVKDDDNDDDSRKIKRLDETITSLQAQVDELLRGL

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PKNH_0317700123 SSVAVSGIGT0.993unspPKNH_0317700123 SSVAVSGIGT0.993unspPKNH_0317700123 SSVAVSGIGT0.993unspPKNH_0317700181 SNQRSSKKGG0.998unspPKNH_0317700193 SEKGTSVKRP0.998unspPKNH_0317700315 SYSRGSEGNP0.995unspPKNH_0317700399 SVDKTSDKGY0.994unspPKNH_0317700469 SVDVVSQVDE0.991unspPKNH_0317700554 SRKWHSRKKG0.995unspPKNH_0317700618 STVDHSTEDH0.998unspPKNH_0317700713 SEDDHSELDN0.996unspPKNH_0317700857 SRNIKSIRDT0.996unspPKNH_0317700917 TATRATKREK0.991unspPKNH_0317700935 SNDDDSRKIK0.991unspPKNH_031770053 SNDNTSTLDK0.996unspPKNH_031770060 SDKRVSEERA0.998unsp

PK7_1690c      PKH_031600      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India