PKNH_0413200 | cysteine protease, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PKNH_0413200SP0.0001580.9998410.000000CS pos: 22-23. ARC-AP. Pr: 0.5842
No Results

  • Fasta :-

    >PKNH_0413200 MKLRICALLLIGLAFASGGARCAPGESDSSSESHSAGQSGGSSAGPSQGDSTSSSQNAAA SPSQGGPASPPTDNPESSVGDNPASLSQGTGNGEVSSADSTSGTPGAEGDNAATVQSPEV TNTEVSPQPEANSPDTPPVSQPSSVPTSSSGDSPVPATSSASFTNPIQVKASLLKNYKGV KVTGPCGSYFQVYLVPYLYMNVNSSNSEIEMEPLFMKVDNKIKFEKEKHLLHNICANNKT FKLVLYVYEGVLTIKWKVYPAEGGEGSDKKVDIRKYKMKDIGQPITSIQVMMVTERDGTI YVESKNFSIMNDIPEKCDAIANQCFMSGVLDIQKCYHCTLLLQEKEKAEECFKFVSTEVK NRFEEIQTKGEDEKNPNEAELEETIDNIFTKIYGGEENLHKEVNQLAILDYSLKYELLKY CLLMKEVDASGTLDNQELPNPEDVFAHITTLLQNNNELNVFSLKNKMKNPALCLKEVDQW IGSKTGLTLPALEHSTVQNNEETFDESEDDISGSTTTEGADLYPLHFSDKLFCNYDYCDR TKDTSSCLSKMEVHDQGNCATSWLFASKLHLETIKCMKGYKHIPSSALYVANCSNKETHN KDKCHTPSNPLEFLHTLEETKFLPAESDLPYCYKKVGNDICPEPKSHWQNLWTNIKLVDA QYQPNSISTKGYTEYQSKYFKGNMDAFIKLVKSEIMNKGSVIAYVKATGALSFDLNGKKV QNLCGEEGTPDLAVNIIGYGNYINEEGIKKSYWLLQNSWGYYWGNEGTFKVDMHGPDDCE HNFIHTAAVFNLDIPVVIPAPNGDPEINSYYLKNSPDFYKNLYYNALDGECGSTPCHSVE GQDTTVEQTTGQEASREDTEEKATEQVGASGAGVATVATTGTGAAPGTGAKAGAEAGAGA ETEATKATELQEPKLQQEQEQQTQSPQQPPQQGLTNENAQQADGEVVQGAPGQAVATHPV PSGEGNGTGGETVPGNTNSVQSTPQNSGSSAEIGQTNASTNGAEPPVSDPVETPSPVELS KLTGTTGINVDGVTRVLHFLKNVKNGKVTSSFVTYDNESAIGDKSCSRVQSSDLDKLDDC VKFCEENWDACKGSVSPGYCLTKKRGNNECFFCFV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_0413200.fa Sequence name : PKNH_0413200 Sequence length : 1115 VALUES OF COMPUTED PARAMETERS Coef20 : 4.480 CoefTot : 0.331 ChDiff : -58 ZoneTo : 25 KR : 3 DE : 0 CleavSite : 23 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.447 1.894 0.364 0.612 MesoH : -0.150 0.042 -0.270 0.200 MuHd_075 : 15.742 11.674 4.201 4.446 MuHd_095 : 17.468 9.028 4.617 4.795 MuHd_100 : 18.928 10.572 4.860 4.658 MuHd_105 : 26.820 11.697 7.031 5.930 Hmax_075 : 13.600 21.700 5.332 6.883 Hmax_095 : 15.800 16.800 4.521 5.710 Hmax_100 : 16.000 17.800 4.717 6.380 Hmax_105 : 16.800 20.417 4.910 6.720 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9339 0.0661 DFMC : 0.9306 0.0694
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 1115 PKNH_0413200 MKLRICALLLIGLAFASGGARCAPGESDSSSESHSAGQSGGSSAGPSQGDSTSSSQNAAASPSQGGPASPPTDNPESSVG 80 DNPASLSQGTGNGEVSSADSTSGTPGAEGDNAATVQSPEVTNTEVSPQPEANSPDTPPVSQPSSVPTSSSGDSPVPATSS 160 ASFTNPIQVKASLLKNYKGVKVTGPCGSYFQVYLVPYLYMNVNSSNSEIEMEPLFMKVDNKIKFEKEKHLLHNICANNKT 240 FKLVLYVYEGVLTIKWKVYPAEGGEGSDKKVDIRKYKMKDIGQPITSIQVMMVTERDGTIYVESKNFSIMNDIPEKCDAI 320 ANQCFMSGVLDIQKCYHCTLLLQEKEKAEECFKFVSTEVKNRFEEIQTKGEDEKNPNEAELEETIDNIFTKIYGGEENLH 400 KEVNQLAILDYSLKYELLKYCLLMKEVDASGTLDNQELPNPEDVFAHITTLLQNNNELNVFSLKNKMKNPALCLKEVDQW 480 IGSKTGLTLPALEHSTVQNNEETFDESEDDISGSTTTEGADLYPLHFSDKLFCNYDYCDRTKDTSSCLSKMEVHDQGNCA 560 TSWLFASKLHLETIKCMKGYKHIPSSALYVANCSNKETHNKDKCHTPSNPLEFLHTLEETKFLPAESDLPYCYKKVGNDI 640 CPEPKSHWQNLWTNIKLVDAQYQPNSISTKGYTEYQSKYFKGNMDAFIKLVKSEIMNKGSVIAYVKATGALSFDLNGKKV 720 QNLCGEEGTPDLAVNIIGYGNYINEEGIKKSYWLLQNSWGYYWGNEGTFKVDMHGPDDCEHNFIHTAAVFNLDIPVVIPA 800 PNGDPEINSYYLKNSPDFYKNLYYNALDGECGSTPCHSVEGQDTTVEQTTGQEASREDTEEKATEQVGASGAGVATVATT 880 GTGAAPGTGAKAGAEAGAGAETEATKATELQEPKLQQEQEQQTQSPQQPPQQGLTNENAQQADGEVVQGAPGQAVATHPV 960 PSGEGNGTGGETVPGNTNSVQSTPQNSGSSAEIGQTNASTNGAEPPVSDPVETPSPVELSKLTGTTGINVDGVTRVLHFL 1040 KNVKNGKVTSSFVTYDNESAIGDKSCSRVQSSDLDKLDDCVKFCEENWDACKGSVSPGYCLTKKRGNNECFFCFV 1120 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ................................................................................ 960 ................................................................................ 1040 ........................................................................... 1120 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_0413200 2 -----MK|LR 0.060 . PKNH_0413200 4 ---MKLR|IC 0.081 . PKNH_0413200 21 FASGGAR|CA 0.126 . PKNH_0413200 170 TNPIQVK|AS 0.059 . PKNH_0413200 175 VKASLLK|NY 0.065 . PKNH_0413200 178 SLLKNYK|GV 0.077 . PKNH_0413200 181 KNYKGVK|VT 0.074 . PKNH_0413200 217 MEPLFMK|VD 0.060 . PKNH_0413200 221 FMKVDNK|IK 0.070 . PKNH_0413200 223 KVDNKIK|FE 0.060 . PKNH_0413200 226 NKIKFEK|EK 0.064 . PKNH_0413200 228 IKFEKEK|HL 0.072 . PKNH_0413200 239 NICANNK|TF 0.057 . PKNH_0413200 242 ANNKTFK|LV 0.084 . PKNH_0413200 255 EGVLTIK|WK 0.054 . PKNH_0413200 257 VLTIKWK|VY 0.067 . PKNH_0413200 269 GGEGSDK|KV 0.072 . PKNH_0413200 270 GEGSDKK|VD 0.100 . PKNH_0413200 274 DKKVDIR|KY 0.080 . PKNH_0413200 275 KKVDIRK|YK 0.103 . PKNH_0413200 277 VDIRKYK|MK 0.257 . PKNH_0413200 279 IRKYKMK|DI 0.170 . PKNH_0413200 296 VMMVTER|DG 0.101 . PKNH_0413200 305 TIYVESK|NF 0.071 . PKNH_0413200 316 MNDIPEK|CD 0.062 . PKNH_0413200 334 GVLDIQK|CY 0.056 . PKNH_0413200 345 TLLLQEK|EK 0.058 . PKNH_0413200 347 LLQEKEK|AE 0.068 . PKNH_0413200 353 KAEECFK|FV 0.091 . PKNH_0413200 360 FVSTEVK|NR 0.070 . PKNH_0413200 362 STEVKNR|FE 0.131 . PKNH_0413200 369 FEEIQTK|GE 0.068 . PKNH_0413200 374 TKGEDEK|NP 0.068 . PKNH_0413200 391 IDNIFTK|IY 0.107 . PKNH_0413200 401 GEENLHK|EV 0.067 . PKNH_0413200 414 ILDYSLK|YE 0.055 . PKNH_0413200 419 LKYELLK|YC 0.059 . PKNH_0413200 425 KYCLLMK|EV 0.083 . PKNH_0413200 464 LNVFSLK|NK 0.060 . PKNH_0413200 466 VFSLKNK|MK 0.078 . PKNH_0413200 468 SLKNKMK|NP 0.072 . PKNH_0413200 475 NPALCLK|EV 0.093 . PKNH_0413200 484 DQWIGSK|TG 0.053 . PKNH_0413200 530 PLHFSDK|LF 0.061 . PKNH_0413200 540 NYDYCDR|TK 0.069 . PKNH_0413200 542 DYCDRTK|DT 0.080 . PKNH_0413200 550 TSSCLSK|ME 0.070 . PKNH_0413200 568 SWLFASK|LH 0.060 . PKNH_0413200 575 LHLETIK|CM 0.059 . PKNH_0413200 578 ETIKCMK|GY 0.069 . PKNH_0413200 581 KCMKGYK|HI 0.064 . PKNH_0413200 596 VANCSNK|ET 0.074 . PKNH_0413200 601 NKETHNK|DK 0.076 . PKNH_0413200 603 ETHNKDK|CH 0.076 . PKNH_0413200 621 HTLEETK|FL 0.062 . PKNH_0413200 634 DLPYCYK|KV 0.077 . PKNH_0413200 635 LPYCYKK|VG 0.100 . PKNH_0413200 645 DICPEPK|SH 0.085 . PKNH_0413200 656 NLWTNIK|LV 0.072 . PKNH_0413200 670 PNSISTK|GY 0.082 . PKNH_0413200 678 YTEYQSK|YF 0.070 . PKNH_0413200 681 YQSKYFK|GN 0.080 . PKNH_0413200 689 NMDAFIK|LV 0.068 . PKNH_0413200 692 AFIKLVK|SE 0.068 . PKNH_0413200 698 KSEIMNK|GS 0.061 . PKNH_0413200 706 SVIAYVK|AT 0.068 . PKNH_0413200 718 SFDLNGK|KV 0.064 . PKNH_0413200 719 FDLNGKK|VQ 0.069 . PKNH_0413200 749 INEEGIK|KS 0.060 . PKNH_0413200 750 NEEGIKK|SY 0.111 . PKNH_0413200 770 GNEGTFK|VD 0.066 . PKNH_0413200 813 INSYYLK|NS 0.067 . PKNH_0413200 820 NSPDFYK|NL 0.063 . PKNH_0413200 856 TGQEASR|ED 0.092 . PKNH_0413200 862 REDTEEK|AT 0.085 . PKNH_0413200 891 APGTGAK|AG 0.066 . PKNH_0413200 906 AETEATK|AT 0.070 . PKNH_0413200 914 TELQEPK|LQ 0.064 . PKNH_0413200 1021 SPVELSK|LT 0.078 . PKNH_0413200 1035 NVDGVTR|VL 0.072 . PKNH_0413200 1041 RVLHFLK|NV 0.077 . PKNH_0413200 1044 HFLKNVK|NG 0.051 . PKNH_0413200 1047 KNVKNGK|VT 0.065 . PKNH_0413200 1064 ESAIGDK|SC 0.093 . PKNH_0413200 1068 GDKSCSR|VQ 0.079 . PKNH_0413200 1076 QSSDLDK|LD 0.070 . PKNH_0413200 1082 KLDDCVK|FC 0.062 . PKNH_0413200 1092 ENWDACK|GS 0.058 . PKNH_0413200 1103 PGYCLTK|KR 0.066 . PKNH_0413200 1104 GYCLTKK|RG 0.073 . PKNH_0413200 1105 YCLTKKR|GN 0.222 . ____________________________^_________________

  • Fasta :-

    >PKNH_0413200 ATGAAGTTACGCATCTGTGCCCTTCTGCTAATAGGTCTTGCGTTTGCAAGTGGGGGTGCG CGATGCGCCCCAGGGGAGAGTGACAGTTCATCCGAAAGTCATTCAGCAGGTCAATCGGGA GGTAGTTCAGCAGGTCCATCCCAAGGTGATTCAACAAGTTCATCCCAAAATGCTGCAGCA AGTCCATCCCAAGGTGGTCCAGCAAGTCCACCCACAGATAATCCGGAAAGTTCAGTCGGA GATAATCCAGCAAGTTTATCCCAAGGTACGGGCAATGGAGAAGTAAGTTCTGCAGATTCT ACCAGTGGTACACCAGGTGCAGAAGGAGACAACGCTGCGACAGTACAATCACCAGAAGTA ACTAATACAGAAGTGTCACCACAACCTGAAGCGAATAGTCCGGATACACCTCCTGTGTCT CAACCATCAAGTGTTCCGACTTCTTCCAGTGGAGATTCTCCAGTACCTGCCACTTCCTCC GCGAGTTTCACAAATCCCATTCAGGTGAAAGCGTCGTTATTAAAAAACTACAAGGGAGTG AAAGTAACAGGTCCATGCGGTTCCTACTTCCAAGTGTACCTCGTGCCCTACCTCTACATG AATGTAAACTCATCGAACAGTGAAATTGAGATGGAGCCCTTGTTCATGAAGGTCGACAAC AAGATCAAATTTGAGAAGGAGAAGCATCTCCTCCACAACATCTGTGCTAACAATAAAACA TTTAAGCTTGTCTTGTACGTGTATGAGGGAGTACTAACCATTAAATGGAAGGTCTATCCT GCTGAGGGGGGAGAAGGTTCAGATAAAAAGGTGGACATTAGGAAATATAAAATGAAGGAT ATCGGTCAACCTATTACCTCCATACAAGTGATGATGGTTACTGAGAGGGATGGAACCATC TACGTGGAGAGCAAAAATTTTTCCATCATGAATGATATTCCCGAAAAATGTGATGCCATT GCGAACCAATGTTTTATGAGTGGTGTGTTGGATATCCAGAAGTGCTACCACTGCACGCTG TTGTTACAGGAGAAGGAAAAGGCGGAGGAGTGCTTCAAGTTTGTGTCAACGGAGGTTAAA AATAGATTTGAGGAAATACAAACAAAGGGAGAAGACGAAAAGAACCCCAACGAAGCAGAA TTGGAGGAAACCATTGATAACATATTCACCAAAATTTATGGAGGAGAAGAAAATCTTCAT AAGGAGGTTAATCAACTAGCCATCTTGGATTACTCTTTGAAGTATGAACTTCTCAAGTAC TGTTTGTTAATGAAAGAGGTGGATGCTAGTGGAACACTGGATAATCAGGAACTTCCTAAC CCCGAGGATGTATTCGCCCACATAACGACCTTGCTCCAAAACAATAACGAACTTAATGTC TTTTCATTAAAGAACAAGATGAAAAATCCAGCCCTATGTTTGAAGGAAGTTGATCAATGG ATTGGAAGCAAGACCGGCCTCACACTTCCCGCCCTCGAGCATAGCACTGTGCAAAATAAT GAAGAAACCTTCGACGAAAGCGAAGATGACATTTCCGGTTCGACCACAACGGAAGGTGCA GATTTGTATCCCTTACACTTCTCAGACAAGTTGTTCTGTAATTATGATTACTGTGATAGA ACCAAGGATACTAGTAGTTGCTTATCTAAAATGGAGGTGCACGATCAAGGAAATTGTGCT ACTTCATGGCTATTCGCTTCGAAATTACATTTAGAAACTATAAAATGTATGAAGGGATAC AAACACATTCCAAGTTCTGCTTTGTATGTAGCTAATTGTTCCAATAAAGAAACACACAAC AAGGACAAATGCCATACACCATCCAACCCACTAGAATTCTTGCACACCTTAGAAGAGACC AAATTTTTACCAGCCGAGTCGGACCTTCCATATTGTTATAAAAAAGTGGGAAATGATATC TGTCCGGAACCAAAGAGTCACTGGCAAAACTTATGGACAAATATTAAACTTGTAGACGCG CAATATCAACCTAATTCGATCAGCACGAAGGGGTACACCGAATACCAGAGTAAATATTTC AAGGGCAATATGGATGCATTTATCAAGTTAGTAAAATCAGAAATAATGAATAAAGGATCT GTTATCGCTTATGTAAAAGCGACAGGTGCACTAAGTTTTGATCTGAACGGAAAGAAGGTG CAGAATTTGTGTGGAGAGGAAGGAACTCCAGATCTTGCAGTCAATATAATTGGTTATGGA AATTACATAAATGAAGAAGGAATAAAGAAATCTTATTGGTTATTGCAGAACAGCTGGGGA TACTACTGGGGTAATGAAGGAACATTCAAAGTGGACATGCATGGACCAGATGATTGCGAA CACAACTTTATCCACACCGCCGCTGTTTTCAATTTGGATATCCCTGTGGTAATTCCCGCA CCGAATGGCGACCCAGAAATAAATAGCTACTACTTGAAGAACTCTCCTGATTTTTATAAG AATCTGTATTATAATGCATTGGATGGGGAATGTGGTAGCACGCCTTGTCATAGCGTTGAG GGTCAGGACACAACTGTGGAGCAAACCACTGGGCAGGAAGCTAGTCGGGAGGACACTGAG GAGAAAGCTACTGAGCAGGTAGGAGCGTCAGGAGCAGGAGTAGCAACAGTAGCAACAACG GGAACGGGAGCAGCACCAGGAACAGGAGCAAAAGCAGGAGCAGAGGCAGGAGCAGGAGCA GAAACAGAAGCAACAAAGGCAACAGAACTACAAGAACCAAAACTGCAGCAGGAACAGGAA CAACAAACACAATCACCACAACAACCACCACAGCAAGGTTTAACAAATGAAAATGCACAA CAAGCAGACGGAGAGGTAGTACAGGGAGCACCCGGACAAGCTGTAGCAACGCATCCGGTA CCATCTGGAGAAGGAAATGGAACTGGCGGAGAGACTGTCCCTGGAAATACGAATTCAGTC CAGAGTACACCACAAAATAGCGGTTCGAGTGCAGAAATTGGACAGACCAATGCTAGCACT AATGGAGCTGAGCCCCCTGTTTCAGACCCTGTGGAAACCCCTTCCCCCGTGGAGTTATCA AAATTAACCGGAACAACGGGCATAAACGTTGATGGCGTCACGAGAGTACTCCATTTTTTG AAAAATGTGAAAAATGGAAAAGTGACTAGCAGTTTTGTGACGTACGATAATGAAAGTGCC ATCGGCGATAAGTCATGTTCCAGAGTCCAGTCTTCAGATCTAGATAAGCTGGATGACTGT GTTAAATTTTGTGAGGAAAACTGGGATGCTTGCAAGGGAAGTGTATCACCTGGTTACTGT CTAACGAAGAAGAGAGGAAACAACGAATGCTTCTTCTGCTTTGTGTAG
  • Download Fasta

  • Fasta :-

    MKLRICALLLIGLAFASGGARCAPGESDSSSESHSAGQSGGSSAGPSQGDSTSSSQNAAA SPSQGGPASPPTDNPESSVGDNPASLSQGTGNGEVSSADSTSGTPGAEGDNAATVQSPEV TNTEVSPQPEANSPDTPPVSQPSSVPTSSSGDSPVPATSSASFTNPIQVKASLLKNYKGV KVTGPCGSYFQVYLVPYLYMNVNSSNSEIEMEPLFMKVDNKIKFEKEKHLLHNICANNKT FKLVLYVYEGVLTIKWKVYPAEGGEGSDKKVDIRKYKMKDIGQPITSIQVMMVTERDGTI YVESKNFSIMNDIPEKCDAIANQCFMSGVLDIQKCYHCTLLLQEKEKAEECFKFVSTEVK NRFEEIQTKGEDEKNPNEAELEETIDNIFTKIYGGEENLHKEVNQLAILDYSLKYELLKY CLLMKEVDASGTLDNQELPNPEDVFAHITTLLQNNNELNVFSLKNKMKNPALCLKEVDQW IGSKTGLTLPALEHSTVQNNEETFDESEDDISGSTTTEGADLYPLHFSDKLFCNYDYCDR TKDTSSCLSKMEVHDQGNCATSWLFASKLHLETIKCMKGYKHIPSSALYVANCSNKETHN KDKCHTPSNPLEFLHTLEETKFLPAESDLPYCYKKVGNDICPEPKSHWQNLWTNIKLVDA QYQPNSISTKGYTEYQSKYFKGNMDAFIKLVKSEIMNKGSVIAYVKATGALSFDLNGKKV QNLCGEEGTPDLAVNIIGYGNYINEEGIKKSYWLLQNSWGYYWGNEGTFKVDMHGPDDCE HNFIHTAAVFNLDIPVVIPAPNGDPEINSYYLKNSPDFYKNLYYNALDGECGSTPCHSVE GQDTTVEQTTGQEASREDTEEKATEQVGASGAGVATVATTGTGAAPGTGAKAGAEAGAGA ETEATKATELQEPKLQQEQEQQTQSPQQPPQQGLTNENAQQADGEVVQGAPGQAVATHPV PSGEGNGTGGETVPGNTNSVQSTPQNSGSSAEIGQTNASTNGAEPPVSDPVETPSPVELS KLTGTTGINVDGVTRVLHFLKNVKNGKVTSSFVTYDNESAIGDKSCSRVQSSDLDKLDDC VKFCEENWDACKGSVSPGYCLTKKRGNNECFFCFV

  • title: active site
  • coordinates: Q556,S562,L732,N757
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PKNH_041320078 SNPESSVGDN0.997unspPKNH_041320078 SNPESSVGDN0.997unspPKNH_041320078 SNPESSVGDN0.997unspPKNH_0413200100 SSSADSTSGT0.994unspPKNH_0413200149 SVPTSSSGDS0.995unspPKNH_0413200153 SSSGDSPVPA0.991unspPKNH_0413200207 SNSSNSEIEM0.993unspPKNH_0413200507 STFDESEDDI0.992unspPKNH_0413200838 STPCHSVEGQ0.995unspPKNH_0413200855 SGQEASREDT0.998unspPKNH_041320030 SESDSSSESH0.994unspPKNH_041320047 SSAGPSQGDS0.996unsp

PK2_0670c      PKH_041210      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India