PKNH_0413300 | cysteine protease, putative

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_IDPredictionOTHERSPmTPCS_Position
PKNH_0413300OTHER0.6854030.2512730.063324
No Results

  • Fasta :-

    >PKNH_0413300 MFLLFFTKSFNAGSLLTHNSGGSVNAESIHGGVIWRKTSDRYLLTQGVSEQNRRMTEYEK LDNSVCKCPAANDPTSTIHGTSSKPGEPCEGLGQADNSKVKAHLLKKSIGLKINRMSGSE MEFLFIPHSYIYVTAQDSRARAFNILTYMEDNALPFTRKVYVPVETLTTTESSATETKWY RRALAENNDGPWDDEHDFFSKGMDSEEEEAIPPIGMDNVDPEEVQLRKTIDRILNWIYRI DEDGKKVLIMQEELDLSMKEDLINYCQIMKKVDKSGTLEEHQIGNEMHVFGNLIKLLQKH GDETVFTLRRKLRNPAMCMQNVKEWVLKRRGLVLPDSSSNDPSEHDKILDVTSKSSTSVR SNSRDASALRYSGEEEGMVDLEKLKMKCYHIFSLNGGVNTDGDHPQKSDGKDLCSPKDKE EVE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_0413300.fa Sequence name : PKNH_0413300 Sequence length : 423 VALUES OF COMPUTED PARAMETERS Coef20 : 4.357 CoefTot : -0.286 ChDiff : -13 ZoneTo : 26 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.294 1.135 -0.037 0.482 MesoH : -1.009 -0.052 -0.530 0.072 MuHd_075 : 17.604 16.091 5.041 4.762 MuHd_095 : 21.389 10.665 6.202 3.821 MuHd_100 : 23.917 14.016 8.167 4.502 MuHd_105 : 24.973 13.622 8.794 4.790 Hmax_075 : 11.813 9.887 0.507 4.655 Hmax_095 : 13.562 8.500 1.409 3.631 Hmax_100 : 17.100 8.100 1.610 5.620 Hmax_105 : 12.500 16.567 1.610 6.100 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9152 0.0848 DFMC : 0.7291 0.2709
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 423 PKNH_0413300 MFLLFFTKSFNAGSLLTHNSGGSVNAESIHGGVIWRKTSDRYLLTQGVSEQNRRMTEYEKLDNSVCKCPAANDPTSTIHG 80 TSSKPGEPCEGLGQADNSKVKAHLLKKSIGLKINRMSGSEMEFLFIPHSYIYVTAQDSRARAFNILTYMEDNALPFTRKV 160 YVPVETLTTTESSATETKWYRRALAENNDGPWDDEHDFFSKGMDSEEEEAIPPIGMDNVDPEEVQLRKTIDRILNWIYRI 240 DEDGKKVLIMQEELDLSMKEDLINYCQIMKKVDKSGTLEEHQIGNEMHVFGNLIKLLQKHGDETVFTLRRKLRNPAMCMQ 320 NVKEWVLKRRGLVLPDSSSNDPSEHDKILDVTSKSSTSVRSNSRDASALRYSGEEEGMVDLEKLKMKCYHIFSLNGGVNT 400 DGDHPQKSDGKDLCSPKDKEEVE 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ....................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_0413300 8 FLLFFTK|SF 0.074 . PKNH_0413300 36 HGGVIWR|KT 0.093 . PKNH_0413300 37 GGVIWRK|TS 0.096 . PKNH_0413300 41 WRKTSDR|YL 0.150 . PKNH_0413300 53 GVSEQNR|RM 0.100 . PKNH_0413300 54 VSEQNRR|MT 0.139 . PKNH_0413300 60 RMTEYEK|LD 0.055 . PKNH_0413300 67 LDNSVCK|CP 0.082 . PKNH_0413300 84 IHGTSSK|PG 0.073 . PKNH_0413300 99 GQADNSK|VK 0.061 . PKNH_0413300 101 ADNSKVK|AH 0.060 . PKNH_0413300 106 VKAHLLK|KS 0.061 . PKNH_0413300 107 KAHLLKK|SI 0.226 . PKNH_0413300 112 KKSIGLK|IN 0.071 . PKNH_0413300 115 IGLKINR|MS 0.091 . PKNH_0413300 139 VTAQDSR|AR 0.073 . PKNH_0413300 141 AQDSRAR|AF 0.092 . PKNH_0413300 158 NALPFTR|KV 0.119 . PKNH_0413300 159 ALPFTRK|VY 0.081 . PKNH_0413300 178 SSATETK|WY 0.075 . PKNH_0413300 181 TETKWYR|RA 0.092 . PKNH_0413300 182 ETKWYRR|AL 0.133 . PKNH_0413300 201 EHDFFSK|GM 0.070 . PKNH_0413300 227 PEEVQLR|KT 0.091 . PKNH_0413300 228 EEVQLRK|TI 0.104 . PKNH_0413300 232 LRKTIDR|IL 0.102 . PKNH_0413300 239 ILNWIYR|ID 0.118 . PKNH_0413300 245 RIDEDGK|KV 0.066 . PKNH_0413300 246 IDEDGKK|VL 0.086 . PKNH_0413300 259 ELDLSMK|ED 0.058 . PKNH_0413300 270 NYCQIMK|KV 0.078 . PKNH_0413300 271 YCQIMKK|VD 0.083 . PKNH_0413300 274 IMKKVDK|SG 0.096 . PKNH_0413300 295 VFGNLIK|LL 0.064 . PKNH_0413300 299 LIKLLQK|HG 0.062 . PKNH_0413300 309 ETVFTLR|RK 0.067 . PKNH_0413300 310 TVFTLRR|KL 0.101 . PKNH_0413300 311 VFTLRRK|LR 0.072 . PKNH_0413300 313 TLRRKLR|NP 0.275 . PKNH_0413300 323 MCMQNVK|EW 0.061 . PKNH_0413300 328 VKEWVLK|RR 0.073 . PKNH_0413300 329 KEWVLKR|RG 0.118 . PKNH_0413300 330 EWVLKRR|GL 0.120 . PKNH_0413300 347 DPSEHDK|IL 0.080 . PKNH_0413300 354 ILDVTSK|SS 0.083 . PKNH_0413300 360 KSSTSVR|SN 0.213 . PKNH_0413300 364 SVRSNSR|DA 0.149 . PKNH_0413300 370 RDASALR|YS 0.154 . PKNH_0413300 383 GMVDLEK|LK 0.066 . PKNH_0413300 385 VDLEKLK|MK 0.061 . PKNH_0413300 387 LEKLKMK|CY 0.068 . PKNH_0413300 407 DGDHPQK|SD 0.090 . PKNH_0413300 411 PQKSDGK|DL 0.066 . PKNH_0413300 417 KDLCSPK|DK 0.089 . PKNH_0413300 419 LCSPKDK|EE 0.070 . ____________________________^_________________

  • Fasta :-

    >PKNH_0413300 ATGTTCCTCCTTTTCTTTACGAAATCATTTAACGCAGGTTCTCTGTTAACGCATAACTCG GGAGGCTCTGTAAATGCAGAGTCAATTCATGGAGGCGTAATATGGAGGAAGACATCAGAC AGATATCTACTTACACAGGGAGTTTCTGAGCAGAACAGAAGAATGACTGAATATGAGAAA CTGGATAATAGTGTATGCAAATGTCCAGCGGCGAATGATCCTACTTCCACTATTCATGGG ACATCTTCTAAACCTGGAGAACCATGCGAAGGGTTAGGTCAAGCAGACAACTCCAAAGTG AAAGCACATTTATTGAAAAAATCAATCGGGTTGAAGATTAACAGAATGTCTGGATCAGAA ATGGAATTCCTTTTCATCCCCCATTCTTATATCTACGTTACAGCGCAAGACTCCAGAGCA CGAGCCTTTAATATTCTAACCTATATGGAGGATAACGCCTTACCCTTTACCAGGAAGGTG TATGTACCCGTGGAAACCCTCACAACAACAGAGAGCAGCGCAACTGAGACGAAATGGTAC AGGCGGGCCTTAGCCGAAAACAATGATGGCCCGTGGGACGATGAACATGATTTCTTTTCG AAGGGAATGGATTCAGAAGAGGAAGAAGCCATTCCCCCAATAGGAATGGATAATGTTGAT CCGGAGGAAGTCCAACTCAGGAAAACTATCGACCGTATCTTGAATTGGATTTATAGAATC GATGAGGATGGAAAGAAGGTGCTAATAATGCAGGAAGAGTTAGATCTATCCATGAAAGAG GACCTAATAAATTATTGCCAAATAATGAAAAAGGTTGATAAAAGTGGTACTCTAGAAGAA CATCAGATAGGTAACGAAATGCATGTGTTTGGTAACCTCATCAAACTGTTGCAAAAACAT GGGGACGAAACAGTTTTTACTCTGCGAAGGAAACTGCGGAACCCAGCGATGTGCATGCAG AATGTTAAGGAGTGGGTGCTAAAGAGGAGGGGGTTGGTCTTGCCCGACTCGTCTAGCAAT GACCCAAGTGAACATGACAAAATTTTGGATGTAACCTCCAAATCGTCCACGTCTGTAAGG AGTAACTCCAGGGATGCGAGCGCCCTTAGGTACAGTGGGGAGGAAGAAGGAATGGTTGAT TTGGAGAAATTAAAAATGAAATGCTATCACATTTTCAGCCTTAATGGTGGGGTTAACACA GATGGCGATCATCCCCAAAAGTCGGATGGTAAAGATCTGTGCTCTCCTAAGGATAAGGAA GAGGTAGAATAA
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  • Fasta :-

    MFLLFFTKSFNAGSLLTHNSGGSVNAESIHGGVIWRKTSDRYLLTQGVSEQNRRMTEYEK LDNSVCKCPAANDPTSTIHGTSSKPGEPCEGLGQADNSKVKAHLLKKSIGLKINRMSGSE MEFLFIPHSYIYVTAQDSRARAFNILTYMEDNALPFTRKVYVPVETLTTTESSATETKWY RRALAENNDGPWDDEHDFFSKGMDSEEEEAIPPIGMDNVDPEEVQLRKTIDRILNWIYRI DEDGKKVLIMQEELDLSMKEDLINYCQIMKKVDKSGTLEEHQIGNEMHVFGNLIKLLQKH GDETVFTLRRKLRNPAMCMQNVKEWVLKRRGLVLPDSSSNDPSEHDKILDVTSKSSTSVR SNSRDASALRYSGEEEGMVDLEKLKMKCYHIFSLNGGVNTDGDHPQKSDGKDLCSPKDKE EVE

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PKNH_0413300117 SINRMSGSEM0.997unspPKNH_0413300117 SINRMSGSEM0.997unspPKNH_0413300117 SINRMSGSEM0.997unspPKNH_0413300173 STTESSATET0.996unspPKNH_0413300205 SKGMDSEEEE0.997unspPKNH_0413300257 SELDLSMKED0.996unspPKNH_0413300343 SSNDPSEHDK0.991unspPKNH_0413300358 SKSSTSVRSN0.996unspPKNH_0413300372 SALRYSGEEE0.997unspPKNH_0413300415 SKDLCSPKDK0.998unspPKNH_041330056 TNRRMTEYEK0.994unspPKNH_041330082 SIHGTSSKPG0.995unsp

PK2_0660c      PKH_041220      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India