PKNH_0413400 | cysteine protease, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PKNH_0413400SP0.0023770.9976220.000001CS pos: 16-17. TYG-NN. Pr: 0.3269
No Results

  • Fasta :-

    >PKNH_0413400 MKSSFLLLLALCATYGNNLAICTTEGTAQSGVSSDSQHSLSSSETETGSHGAPGAEAQSV SPEGGQDAVHSTNESAESDAESPTEPNPPQEDGTSNEDGNGGHSESSAPSVPGGSASPSS VENSNEQAAGTQLQVAPQKAQVKSALLKNFTGVKVTGPCDTEVGLFLIPYIYISVKVAED NIELSTNFPNSENIIVKFSNEGQEMNNKCRGDPKKTYKFIAYLDDNILTLKWVVYPPNGD GEKKVPDVKKYKLPNLERPITSIQVHSLMLQGENIIYTSKDYSIKNDIPETCEQVLSACF LSGNTDIENCYTCNLLLHKENTDDKCFDYVSADFKKEFEDIKLKGQDDEDSGEYKLAQAI NAILNGVYKTGANGKKELITSEELDANFMEQIGNYCQIMKKVDKSGTLEEHQMGTEVDVF NNLVKFLQKHQEEEYSTLEWKLQNPVLCLKNVNDWVMNKKGLLLPLLQNDDSHIHLGEYD KEGDEQKCCSSTYQEGDDGIIDLSVVHKNAHASSTPFTNHMFCNYDYCDRTKDTSSCLSK IEVQDQGNCATSWLFASKLHLETIKCMKGYKHIPSSALYVANCSNKETLNKDKCHTPSNP LEFLHTLEETKFLPSESDLPYCYKKVGNDICPEPKSHWKNLWTNIKLVDAQYQPNSISTK GYTEYQSKYFKGNMDAFIKLVKSEIINKGSVIAYVKAAGALSFDLNGKKVQNLCGEEGTP DLAVNIIGYGNYINEEGIKKSYWLLQNSWGYYWGNEGTFKVDMHGPDDCEHNFIHTAAVF NLDMPEFQSPIKDTELHSYYLKNSPDFYKNLYYNALDGECGNAPCNTVEGQDAPGEKATD QVGASGAGVATVTTTGTGAAPGTGAEAKAGAEAGAGAETEATKATEVLEPKEQQAQSQVT VVENSVSKDQPQPQPQPQPQPQPQLQQEQQQEQQQEQQQEQQQEQQQQQEQQQQQPQPPQ PALQDLTNEHSPHIGETEVKVEPEGENSNAELQKAKMVQIIHVLKHIKQTKMVTRVVTYQ GNYELGEHSCSRTEASSVEKLDECIKFCDEHYSECKLSISPGYCLTKKRNANDCNFCFV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_0413400.fa Sequence name : PKNH_0413400 Sequence length : 1079 VALUES OF COMPUTED PARAMETERS Coef20 : 4.439 CoefTot : 0.591 ChDiff : -61 ZoneTo : 24 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.424 1.682 0.285 0.616 MesoH : -0.337 0.161 -0.343 0.186 MuHd_075 : 14.687 10.313 3.681 3.894 MuHd_095 : 17.100 11.275 7.205 3.543 MuHd_100 : 11.787 12.000 5.207 3.611 MuHd_105 : 10.796 11.770 5.111 3.465 Hmax_075 : 15.167 19.800 5.073 6.090 Hmax_095 : 15.700 15.500 4.143 5.090 Hmax_100 : 15.000 18.100 4.529 5.890 Hmax_105 : 17.617 19.017 4.529 6.148 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9705 0.0295 DFMC : 0.9369 0.0631
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 1079 PKNH_0413400 MKSSFLLLLALCATYGNNLAICTTEGTAQSGVSSDSQHSLSSSETETGSHGAPGAEAQSVSPEGGQDAVHSTNESAESDA 80 ESPTEPNPPQEDGTSNEDGNGGHSESSAPSVPGGSASPSSVENSNEQAAGTQLQVAPQKAQVKSALLKNFTGVKVTGPCD 160 TEVGLFLIPYIYISVKVAEDNIELSTNFPNSENIIVKFSNEGQEMNNKCRGDPKKTYKFIAYLDDNILTLKWVVYPPNGD 240 GEKKVPDVKKYKLPNLERPITSIQVHSLMLQGENIIYTSKDYSIKNDIPETCEQVLSACFLSGNTDIENCYTCNLLLHKE 320 NTDDKCFDYVSADFKKEFEDIKLKGQDDEDSGEYKLAQAINAILNGVYKTGANGKKELITSEELDANFMEQIGNYCQIMK 400 KVDKSGTLEEHQMGTEVDVFNNLVKFLQKHQEEEYSTLEWKLQNPVLCLKNVNDWVMNKKGLLLPLLQNDDSHIHLGEYD 480 KEGDEQKCCSSTYQEGDDGIIDLSVVHKNAHASSTPFTNHMFCNYDYCDRTKDTSSCLSKIEVQDQGNCATSWLFASKLH 560 LETIKCMKGYKHIPSSALYVANCSNKETLNKDKCHTPSNPLEFLHTLEETKFLPSESDLPYCYKKVGNDICPEPKSHWKN 640 LWTNIKLVDAQYQPNSISTKGYTEYQSKYFKGNMDAFIKLVKSEIINKGSVIAYVKAAGALSFDLNGKKVQNLCGEEGTP 720 DLAVNIIGYGNYINEEGIKKSYWLLQNSWGYYWGNEGTFKVDMHGPDDCEHNFIHTAAVFNLDMPEFQSPIKDTELHSYY 800 LKNSPDFYKNLYYNALDGECGNAPCNTVEGQDAPGEKATDQVGASGAGVATVTTTGTGAAPGTGAEAKAGAEAGAGAETE 880 ATKATEVLEPKEQQAQSQVTVVENSVSKDQPQPQPQPQPQPQPQLQQEQQQEQQQEQQQEQQQEQQQQQEQQQQQPQPPQ 960 PALQDLTNEHSPHIGETEVKVEPEGENSNAELQKAKMVQIIHVLKHIKQTKMVTRVVTYQGNYELGEHSCSRTEASSVEK 1040 LDECIKFCDEHYSECKLSISPGYCLTKKRNANDCNFCFV 1120 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ................................................................................ 960 ................................................................................ 1040 ....................................... 1120 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_0413400 2 -----MK|SS 0.077 . PKNH_0413400 139 LQVAPQK|AQ 0.059 . PKNH_0413400 143 PQKAQVK|SA 0.085 . PKNH_0413400 148 VKSALLK|NF 0.075 . PKNH_0413400 154 KNFTGVK|VT 0.066 . PKNH_0413400 176 YIYISVK|VA 0.073 . PKNH_0413400 197 SENIIVK|FS 0.091 . PKNH_0413400 208 GQEMNNK|CR 0.064 . PKNH_0413400 210 EMNNKCR|GD 0.107 . PKNH_0413400 214 KCRGDPK|KT 0.071 . PKNH_0413400 215 CRGDPKK|TY 0.100 . PKNH_0413400 218 DPKKTYK|FI 0.078 . PKNH_0413400 231 DNILTLK|WV 0.062 . PKNH_0413400 243 PNGDGEK|KV 0.070 . PKNH_0413400 244 NGDGEKK|VP 0.078 . PKNH_0413400 249 KKVPDVK|KY 0.052 . PKNH_0413400 250 KVPDVKK|YK 0.117 . PKNH_0413400 252 PDVKKYK|LP 0.062 . PKNH_0413400 258 KLPNLER|PI 0.098 . PKNH_0413400 280 NIIYTSK|DY 0.074 . PKNH_0413400 285 SKDYSIK|ND 0.065 . PKNH_0413400 319 CNLLLHK|EN 0.056 . PKNH_0413400 325 KENTDDK|CF 0.067 . PKNH_0413400 335 YVSADFK|KE 0.061 . PKNH_0413400 336 VSADFKK|EF 0.133 . PKNH_0413400 342 KEFEDIK|LK 0.065 . PKNH_0413400 344 FEDIKLK|GQ 0.067 . PKNH_0413400 355 EDSGEYK|LA 0.081 . PKNH_0413400 369 ILNGVYK|TG 0.066 . PKNH_0413400 375 KTGANGK|KE 0.054 . PKNH_0413400 376 TGANGKK|EL 0.135 . PKNH_0413400 400 NYCQIMK|KV 0.085 . PKNH_0413400 401 YCQIMKK|VD 0.079 . PKNH_0413400 404 IMKKVDK|SG 0.097 . PKNH_0413400 425 VFNNLVK|FL 0.076 . PKNH_0413400 429 LVKFLQK|HQ 0.068 . PKNH_0413400 441 YSTLEWK|LQ 0.062 . PKNH_0413400 450 NPVLCLK|NV 0.071 . PKNH_0413400 459 NDWVMNK|KG 0.051 . PKNH_0413400 460 DWVMNKK|GL 0.084 . PKNH_0413400 481 HLGEYDK|EG 0.062 . PKNH_0413400 487 KEGDEQK|CC 0.063 . PKNH_0413400 508 DLSVVHK|NA 0.097 . PKNH_0413400 530 NYDYCDR|TK 0.072 . PKNH_0413400 532 DYCDRTK|DT 0.079 . PKNH_0413400 540 TSSCLSK|IE 0.069 . PKNH_0413400 558 SWLFASK|LH 0.060 . PKNH_0413400 565 LHLETIK|CM 0.059 . PKNH_0413400 568 ETIKCMK|GY 0.069 . PKNH_0413400 571 KCMKGYK|HI 0.064 . PKNH_0413400 586 VANCSNK|ET 0.065 . PKNH_0413400 591 NKETLNK|DK 0.068 . PKNH_0413400 593 ETLNKDK|CH 0.065 . PKNH_0413400 611 HTLEETK|FL 0.059 . PKNH_0413400 624 DLPYCYK|KV 0.075 . PKNH_0413400 625 LPYCYKK|VG 0.100 . PKNH_0413400 635 DICPEPK|SH 0.083 . PKNH_0413400 639 EPKSHWK|NL 0.075 . PKNH_0413400 646 NLWTNIK|LV 0.074 . PKNH_0413400 660 PNSISTK|GY 0.082 . PKNH_0413400 668 YTEYQSK|YF 0.070 . PKNH_0413400 671 YQSKYFK|GN 0.080 . PKNH_0413400 679 NMDAFIK|LV 0.066 . PKNH_0413400 682 AFIKLVK|SE 0.069 . PKNH_0413400 688 KSEIINK|GS 0.060 . PKNH_0413400 696 SVIAYVK|AA 0.071 . PKNH_0413400 708 SFDLNGK|KV 0.064 . PKNH_0413400 709 FDLNGKK|VQ 0.069 . PKNH_0413400 739 INEEGIK|KS 0.060 . PKNH_0413400 740 NEEGIKK|SY 0.111 . PKNH_0413400 760 GNEGTFK|VD 0.066 . PKNH_0413400 792 EFQSPIK|DT 0.065 . PKNH_0413400 802 LHSYYLK|NS 0.064 . PKNH_0413400 809 NSPDFYK|NL 0.063 . PKNH_0413400 837 QDAPGEK|AT 0.091 . PKNH_0413400 868 GTGAEAK|AG 0.076 . PKNH_0413400 883 AETEATK|AT 0.070 . PKNH_0413400 891 TEVLEPK|EQ 0.062 . PKNH_0413400 908 VENSVSK|DQ 0.074 . PKNH_0413400 980 IGETEVK|VE 0.062 . PKNH_0413400 994 SNAELQK|AK 0.081 . PKNH_0413400 996 AELQKAK|MV 0.084 . PKNH_0413400 1005 QIIHVLK|HI 0.069 . PKNH_0413400 1008 HVLKHIK|QT 0.069 . PKNH_0413400 1011 KHIKQTK|MV 0.101 . PKNH_0413400 1015 QTKMVTR|VV 0.154 . PKNH_0413400 1032 GEHSCSR|TE 0.079 . PKNH_0413400 1040 EASSVEK|LD 0.066 . PKNH_0413400 1046 KLDECIK|FC 0.060 . PKNH_0413400 1056 EHYSECK|LS 0.057 . PKNH_0413400 1067 PGYCLTK|KR 0.060 . PKNH_0413400 1068 GYCLTKK|RN 0.071 . PKNH_0413400 1069 YCLTKKR|NA 0.241 . ____________________________^_________________

  • Fasta :-

    >PKNH_0413400 ATGAAGTCTAGTTTTCTTTTGTTGCTCGCTTTATGCGCCACTTACGGCAACAATCTAGCG ATATGTACAACTGAGGGAACGGCGCAATCTGGAGTATCCAGTGATTCGCAACATAGTCTC AGTAGCTCTGAGACGGAAACAGGAAGTCACGGAGCGCCCGGGGCGGAGGCGCAATCTGTA TCACCTGAAGGTGGACAAGATGCTGTACATTCCACGAATGAATCGGCTGAATCCGATGCA GAAAGTCCTACGGAGCCAAATCCTCCACAGGAGGATGGGACATCGAATGAAGATGGAAAT GGAGGTCATAGCGAGAGCTCCGCCCCATCGGTCCCCGGGGGAAGCGCTTCGCCTAGTTCT GTAGAAAATTCCAATGAACAGGCTGCAGGAACGCAGCTTCAAGTCGCCCCCCAGAAAGCT CAGGTGAAGTCTGCCCTGTTGAAGAACTTCACGGGGGTGAAGGTCACGGGTCCGTGTGAC ACAGAGGTAGGGCTGTTCCTCATTCCTTACATATACATTTCCGTGAAGGTCGCAGAAGAC AACATAGAATTGTCAACCAATTTTCCCAACTCGGAAAATATTATAGTTAAATTTAGTAAT GAAGGACAGGAAATGAATAACAAGTGTAGAGGTGACCCTAAAAAGACGTATAAATTTATA GCGTATCTGGATGATAACATATTAACCCTCAAGTGGGTTGTCTATCCTCCGAATGGCGAT GGGGAAAAAAAGGTACCCGACGTGAAGAAGTACAAATTGCCCAACCTGGAAAGACCTATA ACCTCAATTCAAGTTCATTCGCTGATGCTCCAAGGGGAAAACATTATATATACAAGCAAG GATTATTCAATAAAGAATGACATTCCGGAAACCTGCGAACAAGTTCTCAGTGCCTGTTTC TTAAGTGGAAACACAGACATAGAAAATTGCTACACCTGCAATTTACTGTTGCATAAAGAA AACACAGACGACAAATGTTTCGATTACGTGTCGGCAGATTTTAAGAAAGAGTTTGAAGAT ATTAAATTGAAGGGCCAGGACGATGAGGACTCTGGCGAATACAAACTTGCGCAGGCCATC AATGCGATATTGAATGGAGTTTACAAAACAGGTGCAAATGGAAAGAAAGAACTAATTACA TCAGAAGAATTAGATGCAAATTTCATGGAGCAGATAGGTAACTACTGCCAAATAATGAAA AAGGTTGATAAAAGTGGTACTCTGGAAGAACATCAAATGGGTACCGAAGTAGATGTCTTC AACAACCTAGTAAAATTTCTACAAAAACACCAGGAGGAGGAATACTCAACCCTGGAATGG AAATTACAGAACCCTGTCCTCTGCCTCAAAAATGTAAATGACTGGGTGATGAATAAGAAG GGATTGCTGTTGCCTCTTTTGCAAAATGATGATAGCCATATCCATTTGGGCGAATACGAC AAAGAGGGAGATGAGCAAAAATGCTGTTCCTCAACCTACCAGGAAGGGGATGACGGAATT ATAGATTTATCCGTCGTACATAAGAACGCACATGCTTCATCCACTCCTTTCACCAATCAT ATGTTCTGTAATTATGATTACTGTGATAGAACCAAGGATACTAGTAGTTGCTTATCTAAA ATAGAGGTGCAAGATCAAGGAAATTGTGCTACTTCATGGCTATTCGCTTCAAAATTACAT TTAGAAACTATAAAATGTATGAAGGGATACAAACACATTCCAAGTTCTGCGTTGTATGTA GCTAATTGTTCCAATAAAGAAACACTCAACAAGGACAAATGCCATACACCATCCAACCCA CTAGAATTTTTGCACACCTTAGAAGAGACTAAATTTTTACCATCCGAGTCAGATCTTCCA TATTGTTATAAGAAAGTGGGAAATGATATCTGTCCAGAGCCAAAGAGTCACTGGAAAAAC TTATGGACAAATATTAAACTTGTAGACGCGCAATATCAACCTAATTCGATCAGCACGAAA GGGTACACCGAATACCAGAGTAAGTATTTCAAGGGCAATATGGATGCATTTATCAAGTTA GTAAAATCAGAAATAATAAATAAAGGATCTGTTATTGCTTATGTAAAAGCGGCGGGAGCA CTAAGTTTTGATCTTAACGGAAAGAAGGTGCAGAATTTGTGTGGAGAGGAAGGAACACCA GATCTTGCAGTCAATATAATTGGTTATGGAAATTACATAAATGAAGAAGGAATAAAGAAA TCTTATTGGTTATTGCAGAACAGTTGGGGATACTACTGGGGTAATGAAGGAACATTCAAG GTAGATATGCATGGACCGGATGATTGCGAGCACAACTTTATTCACACCGCGGCTGTGTTC AACTTAGATATGCCCGAATTCCAATCGCCCATCAAGGACACAGAATTGCACAGCTACTAC TTGAAGAACTCTCCTGATTTTTACAAGAATTTGTATTATAATGCATTGGATGGGGAATGT GGTAACGCGCCTTGTAACACTGTTGAGGGTCAAGACGCACCTGGCGAGAAAGCTACTGAC CAGGTAGGAGCGTCAGGAGCAGGAGTAGCAACAGTAACAACAACGGGAACGGGAGCAGCA CCAGGAACAGGAGCAGAAGCAAAAGCAGGAGCAGAGGCAGGAGCAGGAGCAGAAACAGAA GCAACAAAGGCAACAGAAGTACTAGAACCAAAAGAGCAGCAAGCTCAGTCACAAGTGACG GTCGTAGAAAATTCAGTTTCAAAGGACCAACCGCAACCACAACCGCAACCACAACCACAA CCACAACCACAACTCCAACAAGAGCAGCAACAAGAGCAGCAACAAGAGCAGCAACAGGAG CAACAACAAGAACAGCAGCAACAACAGGAACAGCAGCAACAACAACCACAACCACCACAA CCTGCACTGCAAGATTTAACAAATGAACATTCGCCACATATAGGAGAAACTGAAGTGAAG GTTGAACCAGAGGGGGAGAACTCCAATGCAGAATTGCAAAAGGCAAAAATGGTCCAAATT ATTCACGTTTTGAAACACATTAAGCAGACGAAAATGGTGACGAGAGTAGTCACGTACCAA GGGAATTACGAATTGGGAGAACACTCCTGTTCACGAACCGAAGCATCATCTGTGGAGAAG CTGGACGAGTGCATAAAGTTCTGTGATGAGCATTATTCCGAGTGCAAATTGTCGATTTCA CCAGGGTACTGTTTAACGAAGAAGCGAAATGCGAATGACTGTAATTTCTGTTTCGTGTGA
  • Download Fasta

  • Fasta :-

    MKSSFLLLLALCATYGNNLAICTTEGTAQSGVSSDSQHSLSSSETETGSHGAPGAEAQSV SPEGGQDAVHSTNESAESDAESPTEPNPPQEDGTSNEDGNGGHSESSAPSVPGGSASPSS VENSNEQAAGTQLQVAPQKAQVKSALLKNFTGVKVTGPCDTEVGLFLIPYIYISVKVAED NIELSTNFPNSENIIVKFSNEGQEMNNKCRGDPKKTYKFIAYLDDNILTLKWVVYPPNGD GEKKVPDVKKYKLPNLERPITSIQVHSLMLQGENIIYTSKDYSIKNDIPETCEQVLSACF LSGNTDIENCYTCNLLLHKENTDDKCFDYVSADFKKEFEDIKLKGQDDEDSGEYKLAQAI NAILNGVYKTGANGKKELITSEELDANFMEQIGNYCQIMKKVDKSGTLEEHQMGTEVDVF NNLVKFLQKHQEEEYSTLEWKLQNPVLCLKNVNDWVMNKKGLLLPLLQNDDSHIHLGEYD KEGDEQKCCSSTYQEGDDGIIDLSVVHKNAHASSTPFTNHMFCNYDYCDRTKDTSSCLSK IEVQDQGNCATSWLFASKLHLETIKCMKGYKHIPSSALYVANCSNKETLNKDKCHTPSNP LEFLHTLEETKFLPSESDLPYCYKKVGNDICPEPKSHWKNLWTNIKLVDAQYQPNSISTK GYTEYQSKYFKGNMDAFIKLVKSEIINKGSVIAYVKAAGALSFDLNGKKVQNLCGEEGTP DLAVNIIGYGNYINEEGIKKSYWLLQNSWGYYWGNEGTFKVDMHGPDDCEHNFIHTAAVF NLDMPEFQSPIKDTELHSYYLKNSPDFYKNLYYNALDGECGNAPCNTVEGQDAPGEKATD QVGASGAGVATVTTTGTGAAPGTGAEAKAGAEAGAGAETEATKATEVLEPKEQQAQSQVT VVENSVSKDQPQPQPQPQPQPQPQLQQEQQQEQQQEQQQEQQQEQQQQQEQQQQQPQPPQ PALQDLTNEHSPHIGETEVKVEPEGENSNAELQKAKMVQIIHVLKHIKQTKMVTRVVTYQ GNYELGEHSCSRTEASSVEKLDECIKFCDEHYSECKLSISPGYCLTKKRNANDCNFCFV

  • title: active site
  • coordinates: Q546,S552,L722,N747
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PKNH_041340082 SSDAESPTEP0.995unspPKNH_041340082 SSDAESPTEP0.995unspPKNH_041340082 SSDAESPTEP0.995unspPKNH_041340095 SEDGTSNEDG0.991unspPKNH_0413400120 SASPSSVENS0.992unspPKNH_0413400283 SSKDYSIKND0.996unspPKNH_0413400615 SKFLPSESDL0.996unspPKNH_04134001037 STEASSVEKL0.997unspPKNH_041340039 SDSQHSLSSS0.994unspPKNH_041340041 SQHSLSSSET0.997unsp

PK2_0650c      PKH_041230      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India