PKNH_0413800 | cysteine protease, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PKNH_0413800SP0.2616450.7356140.002741CS pos: 24-25. VKS-NI. Pr: 0.9778
No Results

  • Fasta :-

    >PKNH_0413800 MKINQIAQYVVFTLVAHLVKRVKSNIIINCFGTLHCKICHIAIRNCFLSGTSNLTKCIEC EEKYYNIQPCTHHTENFLQISRDKGAFVEMKNHDYLTEAKVDDLISEIVKLSLERQKNAV PETEQTKQDFQKKIMQLCLYSNFSDHYENAKKHTQANAEEVEKHINKIVIMYMNESNNME HIINSLKNPALCLKDPAEWTKDRAGYKDNDVPSVGIIPERKLFKPYEVKSLMSSLYNYSS NCNRQFCDRFSDPNECENSIRVLNQGTCGNCWAFASSQVISAYRCRKGLGFAEPSIKYVT LCKNKHSNDLEENPFGHYNDNICREGGHLSYYLETLDRTKMLPTSYDVPYNEPIKGVDCP ESSDKWANMWEHVNPLTRILNGYLYRGYIKISFHEYAQSGKTDELISLIKDYIIEQGSLF VSMEVNEKLSFDHDGEKVMMNCEYRASPDHALTLIGYGDYLKPNGEKSSYWLIRNSWGSH WGDKGNFKIDMYGPSDCNGAVLCNAFPLFLQMNGDKITKPLPDDLASTDNKTRYDHSYFT RDRNRRASRRYNPNNERDQPNNQEDKDPFDNPNNNDNYDGNDRDWPPFDPFKDYVYPYMD NRKDAERDNGGISDNRSNKIRRTIFKTTLVVNIGDTNFKRNIYMKKKDEYKEQHSCLRTY SLDSQADVSCRNNCDQHIDLCKHYTSIGRCLMRFAPNYKCVYCGM
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_0413800.fa Sequence name : PKNH_0413800 Sequence length : 705 VALUES OF COMPUTED PARAMETERS Coef20 : 4.161 CoefTot : -1.280 ChDiff : -3 ZoneTo : 58 KR : 7 DE : 0 CleavSite : 23 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.953 1.418 0.136 0.539 MesoH : -0.714 0.323 -0.352 0.150 MuHd_075 : 23.083 20.387 7.603 6.093 MuHd_095 : 33.525 31.591 11.170 8.775 MuHd_100 : 30.745 27.395 8.785 8.434 MuHd_105 : 21.023 20.245 8.505 6.393 Hmax_075 : 17.383 25.550 5.899 6.280 Hmax_095 : 19.400 28.963 6.152 7.410 Hmax_100 : 19.400 27.900 4.988 7.410 Hmax_105 : 15.500 25.317 7.502 6.780 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.1905 0.8095 DFMC : 0.2560 0.7440 This protein is probably imported in mitochondria. f(Ser) = 0.0517 f(Arg) = 0.0345 CMi = 0.43732 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 705 PKNH_0413800 MKINQIAQYVVFTLVAHLVKRVKSNIIINCFGTLHCKICHIAIRNCFLSGTSNLTKCIECEEKYYNIQPCTHHTENFLQI 80 SRDKGAFVEMKNHDYLTEAKVDDLISEIVKLSLERQKNAVPETEQTKQDFQKKIMQLCLYSNFSDHYENAKKHTQANAEE 160 VEKHINKIVIMYMNESNNMEHIINSLKNPALCLKDPAEWTKDRAGYKDNDVPSVGIIPERKLFKPYEVKSLMSSLYNYSS 240 NCNRQFCDRFSDPNECENSIRVLNQGTCGNCWAFASSQVISAYRCRKGLGFAEPSIKYVTLCKNKHSNDLEENPFGHYND 320 NICREGGHLSYYLETLDRTKMLPTSYDVPYNEPIKGVDCPESSDKWANMWEHVNPLTRILNGYLYRGYIKISFHEYAQSG 400 KTDELISLIKDYIIEQGSLFVSMEVNEKLSFDHDGEKVMMNCEYRASPDHALTLIGYGDYLKPNGEKSSYWLIRNSWGSH 480 WGDKGNFKIDMYGPSDCNGAVLCNAFPLFLQMNGDKITKPLPDDLASTDNKTRYDHSYFTRDRNRRASRRYNPNNERDQP 560 NNQEDKDPFDNPNNNDNYDGNDRDWPPFDPFKDYVYPYMDNRKDAERDNGGISDNRSNKIRRTIFKTTLVVNIGDTNFKR 640 NIYMKKKDEYKEQHSCLRTYSLDSQADVSCRNNCDQHIDLCKHYTSIGRCLMRFAPNYKCVYCGM 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 .................................................................P.............. 560 ................................................................................ 640 ................................................................. 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PKNH_0413800 2 -----MK|IN 0.067 . PKNH_0413800 20 LVAHLVK|RV 0.065 . PKNH_0413800 21 VAHLVKR|VK 0.194 . PKNH_0413800 23 HLVKRVK|SN 0.081 . PKNH_0413800 37 FGTLHCK|IC 0.061 . PKNH_0413800 44 ICHIAIR|NC 0.100 . PKNH_0413800 56 GTSNLTK|CI 0.089 . PKNH_0413800 63 CIECEEK|YY 0.069 . PKNH_0413800 82 NFLQISR|DK 0.097 . PKNH_0413800 84 LQISRDK|GA 0.077 . PKNH_0413800 91 GAFVEMK|NH 0.065 . PKNH_0413800 100 DYLTEAK|VD 0.055 . PKNH_0413800 110 LISEIVK|LS 0.059 . PKNH_0413800 115 VKLSLER|QK 0.088 . PKNH_0413800 117 LSLERQK|NA 0.068 . PKNH_0413800 127 PETEQTK|QD 0.065 . PKNH_0413800 132 TKQDFQK|KI 0.082 . PKNH_0413800 133 KQDFQKK|IM 0.094 . PKNH_0413800 151 DHYENAK|KH 0.066 . PKNH_0413800 152 HYENAKK|HT 0.100 . PKNH_0413800 163 NAEEVEK|HI 0.073 . PKNH_0413800 167 VEKHINK|IV 0.075 . PKNH_0413800 187 HIINSLK|NP 0.057 . PKNH_0413800 194 NPALCLK|DP 0.065 . PKNH_0413800 201 DPAEWTK|DR 0.071 . PKNH_0413800 203 AEWTKDR|AG 0.090 . PKNH_0413800 207 KDRAGYK|DN 0.072 . PKNH_0413800 220 VGIIPER|KL 0.081 . PKNH_0413800 221 GIIPERK|LF 0.082 . PKNH_0413800 224 PERKLFK|PY 0.071 . PKNH_0413800 229 FKPYEVK|SL 0.078 . PKNH_0413800 244 YSSNCNR|QF 0.115 . PKNH_0413800 249 NRQFCDR|FS 0.153 . PKNH_0413800 261 ECENSIR|VL 0.101 . PKNH_0413800 284 QVISAYR|CR 0.077 . PKNH_0413800 286 ISAYRCR|KG 0.075 . PKNH_0413800 287 SAYRCRK|GL 0.430 . PKNH_0413800 297 FAEPSIK|YV 0.071 . PKNH_0413800 303 KYVTLCK|NK 0.057 . PKNH_0413800 305 VTLCKNK|HS 0.065 . PKNH_0413800 324 YNDNICR|EG 0.076 . PKNH_0413800 338 YLETLDR|TK 0.061 . PKNH_0413800 340 ETLDRTK|ML 0.060 . PKNH_0413800 355 PYNEPIK|GV 0.086 . PKNH_0413800 365 CPESSDK|WA 0.079 . PKNH_0413800 378 HVNPLTR|IL 0.099 . PKNH_0413800 386 LNGYLYR|GY 0.114 . PKNH_0413800 390 LYRGYIK|IS 0.064 . PKNH_0413800 401 EYAQSGK|TD 0.059 . PKNH_0413800 410 ELISLIK|DY 0.071 . PKNH_0413800 428 SMEVNEK|LS 0.060 . PKNH_0413800 437 FDHDGEK|VM 0.058 . PKNH_0413800 445 MMNCEYR|AS 0.104 . PKNH_0413800 462 GYGDYLK|PN 0.060 . PKNH_0413800 467 LKPNGEK|SS 0.074 . PKNH_0413800 474 SSYWLIR|NS 0.127 . PKNH_0413800 484 GSHWGDK|GN 0.082 . PKNH_0413800 488 GDKGNFK|ID 0.065 . PKNH_0413800 516 LQMNGDK|IT 0.063 . PKNH_0413800 519 NGDKITK|PL 0.063 . PKNH_0413800 531 LASTDNK|TR 0.061 . PKNH_0413800 533 STDNKTR|YD 0.099 . PKNH_0413800 541 DHSYFTR|DR 0.099 . PKNH_0413800 543 SYFTRDR|NR 0.079 . PKNH_0413800 545 FTRDRNR|RA 0.088 . PKNH_0413800 546 TRDRNRR|AS 0.525 *ProP* PKNH_0413800 549 RNRRASR|RY 0.232 . PKNH_0413800 550 NRRASRR|YN 0.235 . PKNH_0413800 557 YNPNNER|DQ 0.081 . PKNH_0413800 566 PNNQEDK|DP 0.075 . PKNH_0413800 583 NYDGNDR|DW 0.079 . PKNH_0413800 592 PPFDPFK|DY 0.063 . PKNH_0413800 602 YPYMDNR|KD 0.074 . PKNH_0413800 603 PYMDNRK|DA 0.113 . PKNH_0413800 607 NRKDAER|DN 0.140 . PKNH_0413800 616 GGISDNR|SN 0.101 . PKNH_0413800 619 SDNRSNK|IR 0.185 . PKNH_0413800 621 NRSNKIR|RT 0.141 . PKNH_0413800 622 RSNKIRR|TI 0.222 . PKNH_0413800 626 IRRTIFK|TT 0.074 . PKNH_0413800 639 IGDTNFK|RN 0.055 . PKNH_0413800 640 GDTNFKR|NI 0.188 . PKNH_0413800 645 KRNIYMK|KK 0.087 . PKNH_0413800 646 RNIYMKK|KD 0.133 . PKNH_0413800 647 NIYMKKK|DE 0.163 . PKNH_0413800 651 KKKDEYK|EQ 0.071 . PKNH_0413800 658 EQHSCLR|TY 0.075 . PKNH_0413800 671 QADVSCR|NN 0.103 . PKNH_0413800 682 QHIDLCK|HY 0.070 . PKNH_0413800 689 HYTSIGR|CL 0.074 . PKNH_0413800 693 IGRCLMR|FA 0.110 . PKNH_0413800 699 RFAPNYK|CV 0.081 . ____________________________^_________________

  • Fasta :-

    >PKNH_0413800 ATGAAGATAAATCAGATAGCGCAGTACGTGGTGTTCACCCTGGTTGCCCATTTGGTGAAG CGAGTCAAGTCCAATATTATAATCAACTGCTTCGGTACGCTACACTGCAAAATATGCCAC ATAGCCATACGGAATTGCTTCTTATCAGGGACTAGTAATTTAACAAAATGTATCGAATGC GAGGAGAAGTACTACAACATTCAGCCTTGCACTCACCATACAGAAAATTTCCTCCAGATC TCCAGGGACAAGGGGGCCTTCGTGGAGATGAAGAATCATGACTACCTGACGGAAGCCAAA GTGGACGATCTCATTTCTGAGATTGTAAAGTTATCACTGGAGAGGCAGAAAAATGCAGTT CCCGAAACAGAACAGACGAAGCAAGATTTCCAAAAAAAAATAATGCAGCTCTGTTTGTAT TCTAATTTTAGCGACCACTACGAAAATGCAAAAAAGCACACACAGGCAAATGCCGAAGAG GTGGAAAAACACATCAACAAAATTGTTATTATGTATATGAACGAGAGTAACAATATGGAG CATATTATTAATTCGCTGAAAAATCCAGCTTTGTGTCTGAAGGATCCAGCAGAATGGACC AAGGACAGGGCTGGCTACAAAGACAACGACGTTCCTTCCGTTGGAATCATACCAGAGCGG AAGTTGTTCAAGCCATACGAGGTGAAGTCGCTGATGAGCTCCCTTTACAATTACTCATCT AACTGCAACCGGCAATTCTGCGACAGATTCTCAGATCCCAATGAGTGTGAAAATAGCATT CGGGTTCTTAACCAGGGCACATGCGGGAATTGTTGGGCCTTCGCCTCCTCGCAGGTGATC TCGGCCTATAGGTGCAGGAAGGGCCTGGGATTCGCGGAGCCCTCCATCAAGTACGTTACG CTCTGTAAAAACAAGCATTCGAATGACTTAGAAGAAAATCCCTTTGGCCACTACAACGAT AATATCTGTAGGGAAGGGGGACACCTCTCATATTATTTAGAAACGTTAGACAGAACGAAG ATGCTACCTACCTCTTATGACGTCCCATACAACGAACCAATAAAAGGTGTAGATTGTCCA GAGAGCAGTGACAAATGGGCAAATATGTGGGAACATGTGAATCCATTAACTAGAATTCTG AATGGGTACCTTTACCGTGGATACATCAAAATTTCCTTTCATGAATATGCGCAGAGTGGA AAGACTGATGAGCTTATTAGCTTAATCAAGGATTACATAATAGAGCAAGGGTCATTATTC GTGTCCATGGAAGTAAATGAAAAGTTAAGTTTCGACCACGATGGAGAGAAAGTCATGATG AACTGCGAATACAGAGCATCCCCTGATCATGCCTTGACATTAATAGGGTATGGTGATTAT TTAAAACCTAATGGAGAAAAAAGTTCCTACTGGTTGATTAGAAATAGTTGGGGTTCTCAC TGGGGTGACAAAGGAAACTTCAAGATCGATATGTATGGTCCTTCCGATTGTAACGGTGCA GTGTTATGCAATGCCTTCCCTCTGTTTCTTCAAATGAATGGAGACAAAATTACCAAGCCA CTCCCTGATGATTTAGCATCCACGGACAACAAAACAAGGTATGACCATTCCTACTTCACT AGAGACAGAAACAGAAGAGCTTCCAGAAGATACAATCCGAATAATGAACGGGACCAACCC AATAATCAGGAAGATAAAGACCCATTTGATAACCCTAATAATAATGATAATTATGATGGC AACGACAGGGATTGGCCACCTTTTGATCCATTCAAGGATTATGTCTACCCCTACATGGAT AATAGGAAGGATGCGGAAAGAGACAATGGGGGTATAAGTGACAACCGCAGTAACAAAATC CGTCGCACGATTTTCAAGACCACCCTCGTGGTAAATATTGGGGATACGAACTTCAAGCGG AACATCTACATGAAAAAAAAAGATGAGTACAAGGAACAGCACTCCTGTCTGAGGACCTAC TCCCTGGATTCCCAAGCGGACGTATCCTGTAGGAACAATTGTGATCAGCATATTGACCTG TGCAAACATTATACATCCATTGGCAGGTGTCTCATGCGCTTTGCCCCCAACTATAAGTGT GTTTACTGTGGCATGTAA
  • Download Fasta

  • Fasta :-

    MKINQIAQYVVFTLVAHLVKRVKSNIIINCFGTLHCKICHIAIRNCFLSGTSNLTKCIEC EEKYYNIQPCTHHTENFLQISRDKGAFVEMKNHDYLTEAKVDDLISEIVKLSLERQKNAV PETEQTKQDFQKKIMQLCLYSNFSDHYENAKKHTQANAEEVEKHINKIVIMYMNESNNME HIINSLKNPALCLKDPAEWTKDRAGYKDNDVPSVGIIPERKLFKPYEVKSLMSSLYNYSS NCNRQFCDRFSDPNECENSIRVLNQGTCGNCWAFASSQVISAYRCRKGLGFAEPSIKYVT LCKNKHSNDLEENPFGHYNDNICREGGHLSYYLETLDRTKMLPTSYDVPYNEPIKGVDCP ESSDKWANMWEHVNPLTRILNGYLYRGYIKISFHEYAQSGKTDELISLIKDYIIEQGSLF VSMEVNEKLSFDHDGEKVMMNCEYRASPDHALTLIGYGDYLKPNGEKSSYWLIRNSWGSH WGDKGNFKIDMYGPSDCNGAVLCNAFPLFLQMNGDKITKPLPDDLASTDNKTRYDHSYFT RDRNRRASRRYNPNNERDQPNNQEDKDPFDNPNNNDNYDGNDRDWPPFDPFKDYVYPYMD NRKDAERDNGGISDNRSNKIRRTIFKTTLVVNIGDTNFKRNIYMKKKDEYKEQHSCLRTY SLDSQADVSCRNNCDQHIDLCKHYTSIGRCLMRFAPNYKCVYCGM

  • title: active site
  • coordinates: Q265,C271,H450,N475
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PKNH_0413800548 SNRRASRRYN0.998unspPKNH_0413800548 SNRRASRRYN0.998unspPKNH_0413800548 SNRRASRRYN0.998unspPKNH_0413800664 SYSLDSQADV0.99unspPKNH_041380064 YCEEKYYNIQ0.99unspPKNH_0413800112 SIVKLSLERQ0.992unsp

PK2_0590c      PKH_041270      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India