PKNH_0420200 | signal peptidase complex subunit SPC1, putative

No Results

Fasta :-
>PKNH_0420200 MGLIRDIKNSLVHTYVCLRRNRMDFHGQKLAFLIKNIIFTISTVVSIAVGYYKEDLALSA YIILAGTVLSALLIMPTWPIYNKNNIHWESANESMNDRKRR
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_0420200.fa Sequence name : PKNH_0420200 Sequence length : 101 VALUES OF COMPUTED PARAMETERS Coef20 : 4.444 CoefTot : -1.416 ChDiff : 6 ZoneTo : 53 KR : 8 DE : 2 CleavSite : 15 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.082 2.241 0.412 0.764 MesoH : 0.044 0.812 -0.217 0.356 MuHd_075 : 38.114 27.412 10.357 9.556 MuHd_095 : 36.057 26.346 9.189 8.323 MuHd_100 : 44.903 29.041 11.780 9.755 MuHd_105 : 39.130 25.566 10.944 7.846 Hmax_075 : 18.550 26.833 6.376 7.105 Hmax_095 : 4.100 25.375 1.518 3.570 Hmax_100 : 16.400 30.200 4.444 6.310 Hmax_105 : 17.500 28.200 5.729 6.113 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5780 0.4220 DFMC : 0.6379 0.3621

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 101 PKNH_0420200 MGLIRDIKNSLVHTYVCLRRNRMDFHGQKLAFLIKNIIFTISTVVSIAVGYYKEDLALSAYIILAGTVLSALLIMPTWPI 80 YNKNNIHWESANESMNDRKRR 160 ................................................................................ 80 ....................P 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PKNH_0420200 5 --MGLIR|DI 0.125 . PKNH_0420200 8 GLIRDIK|NS 0.094 . PKNH_0420200 19 HTYVCLR|RN 0.076 . PKNH_0420200 20 TYVCLRR|NR 0.125 . PKNH_0420200 22 VCLRRNR|MD 0.233 . PKNH_0420200 29 MDFHGQK|LA 0.065 . PKNH_0420200 35 KLAFLIK|NI 0.070 . PKNH_0420200 53 IAVGYYK|ED 0.055 . PKNH_0420200 83 TWPIYNK|NN 0.064 . PKNH_0420200 98 NESMNDR|KR 0.085 . PKNH_0420200 99 ESMNDRK|RR 0.076 . PKNH_0420200 100 SMNDRKR|R- 0.200 . PKNH_0420200 101 MNDRKRR|-- 0.647 *ProP* ____________________________^_________________

Fasta :-
>PKNH_0420200 ATGGGCCTAATTCGCGATATTAAAAACAGTCTAGTGCACACCTATGTGTGTCTCCGGAGG AATCGCATGGATTTCCACGGTCAGAAGCTCGCATTTTTAATCAAAAATATCATCTTCACC ATCAGCACAGTTGTATCTATTGCAGTCGGCTATTACAAGGAGGACTTAGCCTTAAGTGCC TACATCATTTTGGCTGGTACTGTCTTGTCTGCATTGCTGATCATGCCCACGTGGCCCATA TACAACAAGAACAATATTCACTGGGAAAGTGCTAATGAGTCCATGAACGATAGGAAGAGA AGATAA
Download Fasta