PKNH_0505500 | ubiquitin carboxyl-terminal hydrolase 13, putative

_IDPredictionOTHERSPmTPCS_Position
PKNH_0505500OTHER0.9996420.0001880.000169
No Results

  • Fasta :-

    >PKNH_0505500 MTDIKSVVTSISASIREPSKDDVIYLDECSVTGYKDIFEDGVFVDLVSFESFGLKCLKYN YKRAEEGSVQSPGVHGGRFYLNIKKKKKLLEKIEKSEIKNLTLNVEGGFKESKVYEYQLE YSLYDLETNLYISLDQVEDERVKSICNKIISHKNELKKENPNKWINEIKESKYAKDLVQL PNITIKNENLECAVCKAKKNIWLNLSDGYIGCGRKIFNYGGGCLNNEEGAALRHYYESGK KYPLVVKIGTITKEGEADVFSYADDENDSVIDPYIDVHLKNLGINITNLNKTEVTTLEKE IKENQNINFSSILDKDTELVCREGKVGFINLGNTCYMNCALQVFLSIKEVSYRYIDNQLD FLLTLGRENKTHQDMFIQYAKLCSMVFKEDYINKKKNYIKKFKGECEKRNVDVTYDSDVD EENSVSINPSMFRTCLNQKGNSFCNNNQQDIFEFLTYLLNELIENENNIFHRLLNGNNSN KRKINQLENVENGGEAEKEEKFKKSNNSNSNSNSNSNSNINSSNISPSEGANAPGDNQHK NEKSLFNLFTFEMEQTIVSDEHNISRSSFQNNILSLDIPLDNTVLKKLEGETSPTSLPHV TLLDCLNNFIKKDYIDEYYSEEKKMKILAQKDIKFKSFPPYLFIHIKRFYADENWNAKKI NVLVQADEYINLEFMRSENSRVGGDSRSAYGEGAQDKNSAESSHVGVKNEEYIMEQYKDL VDSLLDLGFEKEKVLESIRKVKVKNVNNCISYIYGEDSVELDPQEISQGTEVNSENLNSI VNMGVNKNVAMAALLINKNDLQKSIDYIFSNLDDLTESKCAAIVNSNKCEDGLANYELVA SIVHMGSNANSGHYICYIKDDSKWYVYNDNKIGLCDTNKGKDTAYIHLYKRI
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_0505500.fa Sequence name : PKNH_0505500 Sequence length : 892 VALUES OF COMPUTED PARAMETERS Coef20 : 4.393 CoefTot : 0.373 ChDiff : -25 ZoneTo : 16 KR : 2 DE : 1 CleavSite : 18 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.894 1.388 0.105 0.475 MesoH : -0.995 0.133 -0.487 0.135 MuHd_075 : 11.968 2.088 2.248 1.707 MuHd_095 : 17.676 21.994 7.052 6.399 MuHd_100 : 25.102 24.483 7.693 7.957 MuHd_105 : 27.290 22.738 6.825 7.999 Hmax_075 : 10.383 8.633 1.524 3.512 Hmax_095 : 5.900 17.600 1.933 5.620 Hmax_100 : 17.700 22.200 4.040 7.160 Hmax_105 : 16.013 18.725 3.431 6.108 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9599 0.0401 DFMC : 0.9680 0.0320
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 892 PKNH_0505500 MTDIKSVVTSISASIREPSKDDVIYLDECSVTGYKDIFEDGVFVDLVSFESFGLKCLKYNYKRAEEGSVQSPGVHGGRFY 80 LNIKKKKKLLEKIEKSEIKNLTLNVEGGFKESKVYEYQLEYSLYDLETNLYISLDQVEDERVKSICNKIISHKNELKKEN 160 PNKWINEIKESKYAKDLVQLPNITIKNENLECAVCKAKKNIWLNLSDGYIGCGRKIFNYGGGCLNNEEGAALRHYYESGK 240 KYPLVVKIGTITKEGEADVFSYADDENDSVIDPYIDVHLKNLGINITNLNKTEVTTLEKEIKENQNINFSSILDKDTELV 320 CREGKVGFINLGNTCYMNCALQVFLSIKEVSYRYIDNQLDFLLTLGRENKTHQDMFIQYAKLCSMVFKEDYINKKKNYIK 400 KFKGECEKRNVDVTYDSDVDEENSVSINPSMFRTCLNQKGNSFCNNNQQDIFEFLTYLLNELIENENNIFHRLLNGNNSN 480 KRKINQLENVENGGEAEKEEKFKKSNNSNSNSNSNSNSNINSSNISPSEGANAPGDNQHKNEKSLFNLFTFEMEQTIVSD 560 EHNISRSSFQNNILSLDIPLDNTVLKKLEGETSPTSLPHVTLLDCLNNFIKKDYIDEYYSEEKKMKILAQKDIKFKSFPP 640 YLFIHIKRFYADENWNAKKINVLVQADEYINLEFMRSENSRVGGDSRSAYGEGAQDKNSAESSHVGVKNEEYIMEQYKDL 720 VDSLLDLGFEKEKVLESIRKVKVKNVNNCISYIYGEDSVELDPQEISQGTEVNSENLNSIVNMGVNKNVAMAALLINKND 800 LQKSIDYIFSNLDDLTESKCAAIVNSNKCEDGLANYELVASIVHMGSNANSGHYICYIKDDSKWYVYNDNKIGLCDTNKG 880 KDTAYIHLYKRI 960 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ............ 960 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_0505500 5 --MTDIK|SV 0.102 . PKNH_0505500 16 SISASIR|EP 0.108 . PKNH_0505500 20 SIREPSK|DD 0.070 . PKNH_0505500 35 CSVTGYK|DI 0.068 . PKNH_0505500 55 FESFGLK|CL 0.060 . PKNH_0505500 58 FGLKCLK|YN 0.059 . PKNH_0505500 62 CLKYNYK|RA 0.074 . PKNH_0505500 63 LKYNYKR|AE 0.210 . PKNH_0505500 78 PGVHGGR|FY 0.081 . PKNH_0505500 84 RFYLNIK|KK 0.056 . PKNH_0505500 85 FYLNIKK|KK 0.069 . PKNH_0505500 86 YLNIKKK|KK 0.092 . PKNH_0505500 87 LNIKKKK|KL 0.116 . PKNH_0505500 88 NIKKKKK|LL 0.183 . PKNH_0505500 92 KKKLLEK|IE 0.060 . PKNH_0505500 95 LLEKIEK|SE 0.076 . PKNH_0505500 99 IEKSEIK|NL 0.065 . PKNH_0505500 110 NVEGGFK|ES 0.057 . PKNH_0505500 113 GGFKESK|VY 0.067 . PKNH_0505500 141 DQVEDER|VK 0.072 . PKNH_0505500 143 VEDERVK|SI 0.076 . PKNH_0505500 148 VKSICNK|II 0.088 . PKNH_0505500 153 NKIISHK|NE 0.063 . PKNH_0505500 157 SHKNELK|KE 0.060 . PKNH_0505500 158 HKNELKK|EN 0.100 . PKNH_0505500 163 KKENPNK|WI 0.089 . PKNH_0505500 169 KWINEIK|ES 0.065 . PKNH_0505500 172 NEIKESK|YA 0.070 . PKNH_0505500 175 KESKYAK|DL 0.105 . PKNH_0505500 186 LPNITIK|NE 0.062 . PKNH_0505500 196 LECAVCK|AK 0.069 . PKNH_0505500 198 CAVCKAK|KN 0.065 . PKNH_0505500 199 AVCKAKK|NI 0.100 . PKNH_0505500 214 GYIGCGR|KI 0.093 . PKNH_0505500 215 YIGCGRK|IF 0.077 . PKNH_0505500 233 EEGAALR|HY 0.083 . PKNH_0505500 240 HYYESGK|KY 0.060 . PKNH_0505500 241 YYESGKK|YP 0.072 . PKNH_0505500 247 KYPLVVK|IG 0.057 . PKNH_0505500 253 KIGTITK|EG 0.062 . PKNH_0505500 280 YIDVHLK|NL 0.071 . PKNH_0505500 291 NITNLNK|TE 0.053 . PKNH_0505500 299 EVTTLEK|EI 0.055 . PKNH_0505500 302 TLEKEIK|EN 0.071 . PKNH_0505500 315 FSSILDK|DT 0.096 . PKNH_0505500 322 DTELVCR|EG 0.076 . PKNH_0505500 325 LVCREGK|VG 0.106 . PKNH_0505500 348 QVFLSIK|EV 0.070 . PKNH_0505500 353 IKEVSYR|YI 0.193 . PKNH_0505500 367 FLLTLGR|EN 0.086 . PKNH_0505500 370 TLGRENK|TH 0.141 . PKNH_0505500 381 MFIQYAK|LC 0.068 . PKNH_0505500 388 LCSMVFK|ED 0.074 . PKNH_0505500 394 KEDYINK|KK 0.059 . PKNH_0505500 395 EDYINKK|KN 0.087 . PKNH_0505500 396 DYINKKK|NY 0.109 . PKNH_0505500 400 KKKNYIK|KF 0.061 . PKNH_0505500 401 KKNYIKK|FK 0.224 . PKNH_0505500 403 NYIKKFK|GE 0.071 . PKNH_0505500 408 FKGECEK|RN 0.060 . PKNH_0505500 409 KGECEKR|NV 0.260 . PKNH_0505500 433 INPSMFR|TC 0.073 . PKNH_0505500 439 RTCLNQK|GN 0.065 . PKNH_0505500 472 ENNIFHR|LL 0.105 . PKNH_0505500 481 NGNNSNK|RK 0.069 . PKNH_0505500 482 GNNSNKR|KI 0.266 . PKNH_0505500 483 NNSNKRK|IN 0.101 . PKNH_0505500 498 NGGEAEK|EE 0.053 . PKNH_0505500 501 EAEKEEK|FK 0.060 . PKNH_0505500 503 EKEEKFK|KS 0.069 . PKNH_0505500 504 KEEKFKK|SN 0.141 . PKNH_0505500 540 PGDNQHK|NE 0.056 . PKNH_0505500 543 NQHKNEK|SL 0.088 . PKNH_0505500 566 DEHNISR|SS 0.133 . PKNH_0505500 586 LDNTVLK|KL 0.074 . PKNH_0505500 587 DNTVLKK|LE 0.094 . PKNH_0505500 611 CLNNFIK|KD 0.067 . PKNH_0505500 612 LNNFIKK|DY 0.161 . PKNH_0505500 623 EYYSEEK|KM 0.051 . PKNH_0505500 624 YYSEEKK|MK 0.102 . PKNH_0505500 626 SEEKKMK|IL 0.078 . PKNH_0505500 631 MKILAQK|DI 0.072 . PKNH_0505500 634 LAQKDIK|FK 0.064 . PKNH_0505500 636 QKDIKFK|SF 0.093 . PKNH_0505500 647 YLFIHIK|RF 0.071 . PKNH_0505500 648 LFIHIKR|FY 0.233 . PKNH_0505500 658 DENWNAK|KI 0.068 . PKNH_0505500 659 ENWNAKK|IN 0.094 . PKNH_0505500 676 INLEFMR|SE 0.110 . PKNH_0505500 681 MRSENSR|VG 0.164 . PKNH_0505500 687 RVGGDSR|SA 0.177 . PKNH_0505500 697 GEGAQDK|NS 0.064 . PKNH_0505500 708 SSHVGVK|NE 0.073 . PKNH_0505500 718 YIMEQYK|DL 0.084 . PKNH_0505500 731 LDLGFEK|EK 0.052 . PKNH_0505500 733 LGFEKEK|VL 0.066 . PKNH_0505500 739 KVLESIR|KV 0.082 . PKNH_0505500 740 VLESIRK|VK 0.070 . PKNH_0505500 742 ESIRKVK|VK 0.114 . PKNH_0505500 744 IRKVKVK|NV 0.116 . PKNH_0505500 787 VNMGVNK|NV 0.072 . PKNH_0505500 798 AALLINK|ND 0.051 . PKNH_0505500 803 NKNDLQK|SI 0.104 . PKNH_0505500 819 DDLTESK|CA 0.063 . PKNH_0505500 828 AIVNSNK|CE 0.060 . PKNH_0505500 859 HYICYIK|DD 0.066 . PKNH_0505500 863 YIKDDSK|WY 0.056 . PKNH_0505500 871 YVYNDNK|IG 0.051 . PKNH_0505500 879 GLCDTNK|GK 0.075 . PKNH_0505500 881 CDTNKGK|DT 0.070 . PKNH_0505500 890 AYIHLYK|RI 0.065 . PKNH_0505500 891 YIHLYKR|I- 0.168 . ____________________________^_________________

  • Fasta :-

    >PKNH_0505500 ATGACCGACATTAAAAGCGTTGTGACCTCCATTTCGGCTAGTATCCGCGAACCGTCGAAG GATGATGTTATATACTTGGACGAGTGCAGCGTGACCGGTTACAAGGACATCTTCGAGGAT GGCGTGTTCGTGGACCTCGTTTCCTTCGAGAGCTTCGGTCTGAAGTGCCTTAAGTACAAC TACAAGCGAGCGGAGGAGGGTAGCGTCCAGAGCCCAGGGGTACACGGAGGAAGGTTCTAC CTGAATATCAAGAAGAAAAAAAAATTGTTGGAGAAGATAGAAAAAAGCGAAATAAAAAAT CTGACTCTGAATGTGGAAGGAGGATTCAAGGAGAGTAAGGTGTACGAGTATCAGTTGGAA TATTCATTGTACGACTTGGAAACTAATCTGTATATTAGTTTAGATCAAGTGGAAGACGAG CGTGTAAAAAGCATATGTAACAAAATAATTAGTCACAAGAATGAGCTAAAGAAGGAGAAC CCGAACAAGTGGATAAACGAAATAAAAGAAAGTAAGTACGCAAAGGATCTAGTACAACTA CCAAATATTACAATAAAAAATGAAAACCTCGAATGTGCAGTTTGCAAAGCTAAGAAAAAT ATATGGCTGAATTTATCCGATGGGTACATAGGGTGTGGAAGGAAAATATTCAATTATGGA GGTGGTTGTCTGAACAATGAAGAAGGAGCAGCGTTAAGGCATTATTACGAAAGTGGAAAG AAGTACCCCCTAGTTGTCAAAATAGGAACCATCACCAAGGAAGGTGAAGCAGATGTGTTT TCCTATGCAGATGATGAAAATGACAGTGTAATAGATCCGTACATAGATGTACACCTAAAA AATCTAGGAATTAATATAACAAATTTAAACAAAACAGAAGTTACCACTTTGGAGAAAGAA ATAAAAGAAAATCAGAACATCAATTTTTCTTCTATACTTGATAAGGATACGGAACTTGTA TGTAGAGAAGGGAAGGTTGGATTTATCAACTTAGGAAATACGTGCTACATGAATTGTGCG TTGCAAGTATTCCTCTCCATTAAAGAGGTCAGCTACAGATATATAGACAATCAGTTAGAT TTCCTACTAACGTTGGGAAGGGAAAATAAGACGCACCAAGATATGTTCATTCAATATGCA AAATTATGCAGCATGGTTTTTAAAGAAGATTATATTAATAAAAAAAAAAATTATATAAAA AAGTTTAAAGGAGAATGTGAGAAGAGAAATGTGGATGTAACGTACGACAGTGATGTGGAT GAAGAAAATTCTGTAAGTATCAATCCATCCATGTTTCGAACATGCTTAAATCAAAAGGGA AATTCCTTCTGCAATAATAATCAGCAGGATATTTTCGAGTTTTTAACCTACCTCCTAAAT GAACTGATCGAAAATGAAAATAATATTTTCCATAGACTCCTAAACGGGAATAATTCCAAC AAGAGGAAAATCAATCAGTTGGAAAATGTTGAAAACGGGGGGGAAGCTGAAAAGGAGGAG AAATTTAAAAAGAGCAACAACAGCAATAGCAACAGCAATAGCAACAGCAATAGCAACATC AATAGCAGTAACATATCCCCATCGGAGGGCGCAAACGCACCAGGGGATAACCAACACAAA AACGAAAAATCCCTCTTCAATCTCTTCACCTTCGAAATGGAACAAACCATTGTAAGTGAT GAGCATAACATAAGTAGGAGCTCTTTCCAAAACAACATCCTCTCATTGGACATACCCCTG GATAATACTGTGTTGAAAAAATTAGAAGGAGAAACTTCACCTACCTCTCTCCCTCATGTA ACGCTACTAGACTGCCTGAATAATTTTATAAAAAAAGATTACATTGATGAATACTATAGT GAAGAGAAAAAAATGAAAATCTTAGCCCAGAAGGATATTAAATTTAAGAGCTTCCCTCCT TACCTTTTTATTCACATTAAAAGATTCTATGCGGATGAAAACTGGAACGCAAAGAAGATA AATGTTCTCGTTCAGGCCGATGAATATATCAACTTAGAGTTTATGAGATCGGAGAATAGT CGTGTTGGTGGAGATAGCAGAAGTGCATATGGTGAAGGAGCACAAGATAAGAATTCTGCG GAGTCTTCTCATGTAGGGGTAAAGAACGAGGAGTACATCATGGAACAATATAAGGATCTT GTGGATTCTCTTCTAGATCTAGGATTTGAAAAGGAAAAAGTTTTGGAATCTATTAGAAAA GTGAAAGTAAAAAATGTGAACAACTGTATCTCCTACATTTATGGAGAAGACTCCGTAGAA CTAGATCCCCAAGAAATAAGCCAAGGAACAGAGGTTAATTCAGAAAATTTAAATTCCATC GTCAACATGGGCGTGAACAAGAACGTAGCTATGGCTGCTCTCCTTATAAACAAAAACGAC TTGCAAAAATCTATTGATTATATTTTCTCCAATCTGGATGATCTCACAGAGAGCAAATGC GCTGCGATAGTGAACAGTAACAAGTGCGAAGACGGATTGGCCAACTACGAACTAGTCGCT TCCATCGTGCACATGGGAAGCAACGCTAACTCGGGCCACTACATCTGCTACATAAAGGAC GATTCTAAATGGTACGTATACAACGACAACAAGATTGGTCTATGCGACACGAACAAGGGC AAGGACACGGCATACATCCATTTGTACAAGAGGATCTGA
  • Download Fasta

  • Fasta :-

    MTDIKSVVTSISASIREPSKDDVIYLDECSVTGYKDIFEDGVFVDLVSFESFGLKCLKYN YKRAEEGSVQSPGVHGGRFYLNIKKKKKLLEKIEKSEIKNLTLNVEGGFKESKVYEYQLE YSLYDLETNLYISLDQVEDERVKSICNKIISHKNELKKENPNKWINEIKESKYAKDLVQL PNITIKNENLECAVCKAKKNIWLNLSDGYIGCGRKIFNYGGGCLNNEEGAALRHYYESGK KYPLVVKIGTITKEGEADVFSYADDENDSVIDPYIDVHLKNLGINITNLNKTEVTTLEKE IKENQNINFSSILDKDTELVCREGKVGFINLGNTCYMNCALQVFLSIKEVSYRYIDNQLD FLLTLGRENKTHQDMFIQYAKLCSMVFKEDYINKKKNYIKKFKGECEKRNVDVTYDSDVD EENSVSINPSMFRTCLNQKGNSFCNNNQQDIFEFLTYLLNELIENENNIFHRLLNGNNSN KRKINQLENVENGGEAEKEEKFKKSNNSNSNSNSNSNSNINSSNISPSEGANAPGDNQHK NEKSLFNLFTFEMEQTIVSDEHNISRSSFQNNILSLDIPLDNTVLKKLEGETSPTSLPHV TLLDCLNNFIKKDYIDEYYSEEKKMKILAQKDIKFKSFPPYLFIHIKRFYADENWNAKKI NVLVQADEYINLEFMRSENSRVGGDSRSAYGEGAQDKNSAESSHVGVKNEEYIMEQYKDL VDSLLDLGFEKEKVLESIRKVKVKNVNNCISYIYGEDSVELDPQEISQGTEVNSENLNSI VNMGVNKNVAMAALLINKNDLQKSIDYIFSNLDDLTESKCAAIVNSNKCEDGLANYELVA SIVHMGSNANSGHYICYIKDDSKWYVYNDNKIGLCDTNKGKDTAYIHLYKRI

  • title: Active Site
  • coordinates: N330,C335,H853,D869
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PKNH_0505500269 SDENDSVIDP0.996unspPKNH_0505500269 SDENDSVIDP0.996unspPKNH_0505500269 SDENDSVIDP0.996unspPKNH_0505500391 YFKEDYINKK0.991unspPKNH_0505500417 SVTYDSDVDE0.995unspPKNH_0505500526 SSSNISPSEG0.995unspPKNH_050550014 SSISASIREP0.996unspPKNH_050550019 SIREPSKDDV0.994unsp

PK4_0960c      PKH_051760      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India