PKNH_0601400 | enoyl-CoA hydratase-related protein, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0003860      

  • Computed_GO_Functions:  3-hydroxyisobutyryl-CoA hydrolase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PKNH_0601400OTHER0.9759850.0001080.023907
No Results

  • Fasta :-

    >PKNH_0601400 MQHNAVYRTFDPSQYFPKMWHSKCNHLVKGNKLKHLTTSASAHCCPYLPAKGCPTWRADR KLIRTSIFKDDDIYMDPLQIHNEEPNKTNYLNRASPNECIYTRNNVGMNAILINKKYMDL KCINQLYRELLNGEINFTKRFTFLTSISNDSLTHGYNLMDLLKILEVYQKGKNNRYADVF KKIMYNINELSYLIFSYRKPLIVYCNGSVRGSGGFIPFLANNSASYFHSSYAYTNLKYSF LPYGGISYVLANLRGSIGFYLALTGEVIKSADLMWCGLTKRWIAEDCLELMELTSESQLE VSEQDANLLLEEHFLKVPKMYTLKNYEEIIHDHFKYPSLMQIMAKLDASRKKNHPDERVR LWAEKTYQQILAQPPIAAHLTFEIMNLLRTHKMELLKKAQVTKNIYNQMTQNSYKVVPTT KEEVSLAELKFTIDSELLTKALNLETNAIANFISCPDVLNGITSYLVKDTDHSFKCTYLN NSLLETKKDIIHYFLFYKNDYEFAIHDRPDISFSSLSALDRCNQPFGARDRHFYAEQSKR WSDDYLKDQLNEINKLAL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_0601400.fa Sequence name : PKNH_0601400 Sequence length : 558 VALUES OF COMPUTED PARAMETERS Coef20 : 3.489 CoefTot : -3.148 ChDiff : 8 ZoneTo : 58 KR : 8 DE : 1 CleavSite : 18 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.853 1.076 0.063 0.446 MesoH : 0.237 0.433 -0.150 0.324 MuHd_075 : 29.332 22.827 8.775 8.414 MuHd_095 : 33.246 24.928 11.464 7.780 MuHd_100 : 40.916 20.136 10.033 7.264 MuHd_105 : 49.092 26.531 13.022 8.963 Hmax_075 : 7.583 6.883 -0.757 4.282 Hmax_095 : 11.550 10.400 2.132 3.990 Hmax_100 : 13.500 5.800 0.047 4.200 Hmax_105 : 15.983 9.800 1.186 4.958 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.1679 0.8321 DFMC : 0.2575 0.7425 This protein is probably imported in mitochondria. f(Ser) = 0.0690 f(Arg) = 0.0345 CMi = 0.58309 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 558 PKNH_0601400 MQHNAVYRTFDPSQYFPKMWHSKCNHLVKGNKLKHLTTSASAHCCPYLPAKGCPTWRADRKLIRTSIFKDDDIYMDPLQI 80 HNEEPNKTNYLNRASPNECIYTRNNVGMNAILINKKYMDLKCINQLYRELLNGEINFTKRFTFLTSISNDSLTHGYNLMD 160 LLKILEVYQKGKNNRYADVFKKIMYNINELSYLIFSYRKPLIVYCNGSVRGSGGFIPFLANNSASYFHSSYAYTNLKYSF 240 LPYGGISYVLANLRGSIGFYLALTGEVIKSADLMWCGLTKRWIAEDCLELMELTSESQLEVSEQDANLLLEEHFLKVPKM 320 YTLKNYEEIIHDHFKYPSLMQIMAKLDASRKKNHPDERVRLWAEKTYQQILAQPPIAAHLTFEIMNLLRTHKMELLKKAQ 400 VTKNIYNQMTQNSYKVVPTTKEEVSLAELKFTIDSELLTKALNLETNAIANFISCPDVLNGITSYLVKDTDHSFKCTYLN 480 NSLLETKKDIIHYFLFYKNDYEFAIHDRPDISFSSLSALDRCNQPFGARDRHFYAEQSKRWSDDYLKDQLNEINKLAL 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 .............................................................................. 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_0601400 8 QHNAVYR|TF 0.135 . PKNH_0601400 18 PSQYFPK|MW 0.087 . PKNH_0601400 23 PKMWHSK|CN 0.074 . PKNH_0601400 29 KCNHLVK|GN 0.071 . PKNH_0601400 32 HLVKGNK|LK 0.056 . PKNH_0601400 34 VKGNKLK|HL 0.081 . PKNH_0601400 51 CPYLPAK|GC 0.069 . PKNH_0601400 57 KGCPTWR|AD 0.115 . PKNH_0601400 60 PTWRADR|KL 0.128 . PKNH_0601400 61 TWRADRK|LI 0.103 . PKNH_0601400 64 ADRKLIR|TS 0.093 . PKNH_0601400 69 IRTSIFK|DD 0.074 . PKNH_0601400 87 HNEEPNK|TN 0.060 . PKNH_0601400 93 KTNYLNR|AS 0.090 . PKNH_0601400 103 NECIYTR|NN 0.076 . PKNH_0601400 115 NAILINK|KY 0.055 . PKNH_0601400 116 AILINKK|YM 0.080 . PKNH_0601400 121 KKYMDLK|CI 0.071 . PKNH_0601400 128 CINQLYR|EL 0.103 . PKNH_0601400 139 GEINFTK|RF 0.058 . PKNH_0601400 140 EINFTKR|FT 0.169 . PKNH_0601400 163 NLMDLLK|IL 0.068 . PKNH_0601400 170 ILEVYQK|GK 0.061 . PKNH_0601400 172 EVYQKGK|NN 0.064 . PKNH_0601400 175 QKGKNNR|YA 0.154 . PKNH_0601400 181 RYADVFK|KI 0.073 . PKNH_0601400 182 YADVFKK|IM 0.091 . PKNH_0601400 198 YLIFSYR|KP 0.077 . PKNH_0601400 199 LIFSYRK|PL 0.073 . PKNH_0601400 210 YCNGSVR|GS 0.127 . PKNH_0601400 237 YAYTNLK|YS 0.058 . PKNH_0601400 254 YVLANLR|GS 0.070 . PKNH_0601400 269 LTGEVIK|SA 0.084 . PKNH_0601400 280 MWCGLTK|RW 0.064 . PKNH_0601400 281 WCGLTKR|WI 0.127 . PKNH_0601400 316 LEEHFLK|VP 0.053 . PKNH_0601400 319 HFLKVPK|MY 0.062 . PKNH_0601400 324 PKMYTLK|NY 0.074 . PKNH_0601400 335 IIHDHFK|YP 0.081 . PKNH_0601400 345 LMQIMAK|LD 0.062 . PKNH_0601400 350 AKLDASR|KK 0.070 . PKNH_0601400 351 KLDASRK|KN 0.089 . PKNH_0601400 352 LDASRKK|NH 0.110 . PKNH_0601400 358 KNHPDER|VR 0.100 . PKNH_0601400 360 HPDERVR|LW 0.086 . PKNH_0601400 365 VRLWAEK|TY 0.075 . PKNH_0601400 389 EIMNLLR|TH 0.070 . PKNH_0601400 392 NLLRTHK|ME 0.088 . PKNH_0601400 397 HKMELLK|KA 0.064 . PKNH_0601400 398 KMELLKK|AQ 0.079 . PKNH_0601400 403 KKAQVTK|NI 0.086 . PKNH_0601400 415 MTQNSYK|VV 0.076 . PKNH_0601400 421 KVVPTTK|EE 0.053 . PKNH_0601400 430 VSLAELK|FT 0.070 . PKNH_0601400 440 DSELLTK|AL 0.061 . PKNH_0601400 468 ITSYLVK|DT 0.106 . PKNH_0601400 475 DTDHSFK|CT 0.062 . PKNH_0601400 487 NSLLETK|KD 0.057 . PKNH_0601400 488 SLLETKK|DI 0.118 . PKNH_0601400 498 HYFLFYK|ND 0.057 . PKNH_0601400 508 EFAIHDR|PD 0.074 . PKNH_0601400 521 SLSALDR|CN 0.099 . PKNH_0601400 529 NQPFGAR|DR 0.089 . PKNH_0601400 531 PFGARDR|HF 0.093 . PKNH_0601400 539 FYAEQSK|RW 0.060 . PKNH_0601400 540 YAEQSKR|WS 0.302 . PKNH_0601400 547 WSDDYLK|DQ 0.059 . PKNH_0601400 555 QLNEINK|LA 0.063 . ____________________________^_________________

  • Fasta :-

    >PKNH_0601400 ATGCAGCACAATGCAGTTTACCGCACATTTGACCCCTCACAATATTTCCCCAAAATGTGG CACTCTAAGTGTAACCACCTGGTGAAGGGTAACAAACTTAAACACCTCACCACAAGCGCC AGTGCTCACTGTTGCCCTTATTTGCCCGCCAAGGGATGCCCTACCTGGAGGGCAGACAGA AAGCTAATCCGAACGTCCATCTTCAAAGATGATGACATATACATGGACCCTCTCCAAATT CACAACGAAGAGCCGAACAAAACAAACTACCTGAACAGAGCATCACCAAACGAGTGCATA TACACCCGGAATAACGTAGGAATGAACGCAATCCTCATAAACAAAAAATACATGGACCTA AAATGCATTAACCAGTTGTATAGGGAGCTACTTAATGGAGAAATCAACTTCACGAAAAGG TTCACCTTCCTCACGTCCATCAGTAACGATTCCTTAACACATGGTTACAATTTAATGGAC CTTTTGAAAATCTTGGAAGTGTATCAGAAAGGGAAAAACAACAGATATGCAGATGTTTTC AAGAAAATTATGTATAACATTAATGAATTAAGTTACCTGATCTTTTCATATAGAAAGCCA CTCATAGTCTACTGTAACGGCAGCGTTAGAGGTTCTGGAGGGTTCATACCCTTCTTGGCC AACAATAGCGCCTCATATTTTCACTCGTCCTATGCCTACACGAACTTGAAGTATTCTTTT TTACCTTATGGTGGCATCTCCTACGTGCTAGCCAATTTGAGAGGATCCATTGGATTTTAC TTAGCACTCACAGGCGAAGTAATAAAATCGGCGGACCTTATGTGGTGCGGTTTGACAAAA AGGTGGATAGCAGAAGACTGTCTAGAGCTGATGGAACTCACATCAGAATCGCAACTGGAG GTGTCCGAACAAGATGCCAACCTTCTCTTGGAAGAGCATTTTTTGAAAGTCCCCAAAATG TATACCTTAAAAAATTACGAAGAAATAATTCACGACCATTTTAAGTACCCATCCCTCATG CAAATTATGGCCAAGCTAGATGCATCTAGGAAGAAAAACCATCCTGATGAACGGGTTCGC CTCTGGGCAGAAAAAACATACCAACAAATCCTTGCACAACCTCCTATAGCGGCACATCTA ACATTTGAAATTATGAACCTACTTAGAACCCACAAAATGGAGCTACTCAAAAAAGCACAA GTCACAAAAAATATATACAACCAGATGACACAAAATAGTTACAAGGTAGTCCCAACGACC AAGGAAGAAGTAAGCTTAGCTGAACTCAAGTTCACCATTGATTCGGAGCTCCTTACAAAA GCATTAAACCTTGAAACGAATGCTATAGCCAACTTCATTTCATGTCCAGACGTTCTCAAT GGAATAACCTCCTATTTGGTTAAAGACACGGATCACTCCTTCAAATGCACCTACCTCAAT AACTCTCTTCTTGAGACCAAGAAGGACATCATCCATTACTTCCTCTTTTACAAAAATGAT TACGAGTTTGCTATACATGACAGACCCGACATAAGCTTCTCCAGCTTGAGTGCTCTCGAT CGATGCAACCAGCCTTTTGGTGCACGCGACCGACATTTTTACGCAGAGCAGAGCAAACGA TGGAGCGACGACTACCTGAAGGATCAGCTGAATGAGATTAACAAACTAGCCCTATGA
  • Download Fasta

  • Fasta :-

    MQHNAVYRTFDPSQYFPKMWHSKCNHLVKGNKLKHLTTSASAHCCPYLPAKGCPTWRADR KLIRTSIFKDDDIYMDPLQIHNEEPNKTNYLNRASPNECIYTRNNVGMNAILINKKYMDL KCINQLYRELLNGEINFTKRFTFLTSISNDSLTHGYNLMDLLKILEVYQKGKNNRYADVF KKIMYNINELSYLIFSYRKPLIVYCNGSVRGSGGFIPFLANNSASYFHSSYAYTNLKYSF LPYGGISYVLANLRGSIGFYLALTGEVIKSADLMWCGLTKRWIAEDCLELMELTSESQLE VSEQDANLLLEEHFLKVPKMYTLKNYEEIIHDHFKYPSLMQIMAKLDASRKKNHPDERVR LWAEKTYQQILAQPPIAAHLTFEIMNLLRTHKMELLKKAQVTKNIYNQMTQNSYKVVPTT KEEVSLAELKFTIDSELLTKALNLETNAIANFISCPDVLNGITSYLVKDTDHSFKCTYLN NSLLETKKDIIHYFLFYKNDYEFAIHDRPDISFSSLSALDRCNQPFGARDRHFYAEQSKR WSDDYLKDQLNEINKLAL

    No Results
No Results
No Results
IDSitePeptideScoreMethod
PKNH_0601400473 SDTDHSFKCT0.995unsp

PK10_1640w      PKH_060130      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India