PKNH_0618600 | aspartyl protease, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004190      

  • Computed_GO_Functions:  aspartic-type endopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PKNH_0618600SP0.0868120.9011960.011992CS pos: 25-26. SSS-LL. Pr: 0.3656
No Results

  • Fasta :-

    >PKNH_0618600 MTPNMVARIGFLCLLNIWLSTFSSSLLKNTMGSNFYVASHGVDKMQMDFPHRVHGDLTSE KANQKNSPILIKLIKEDIPSKKMTTYYGQVAIGEKSENVINVLFDTGSTEFWIPFENCRG DNFPDSHNKYKRTKSFKNKFNKEGIPTLLEINYLSGKIIGFDGYDTIKLGANLSVPNTNI AFATKIEIPVLEEFKWDGILGLGFENADSRQRGIKPFLDHLKDENILTEMGYKNQFGYYL SDGGGFITFGGVDNRLKRSPEEEVMWSPVSTDMGFWTIDIMGVRKEYAPDVSVKGKVDEV VVKYEGFHDGGKKSIVDTGTFFIYAPKRTMEGYLNDLKVNSCEDKEKLPYIVFQIKSKGI EGIEGSAIIELVMSPNDYVIEYLNEENWTRECVLGIEADEHKDESQIDGWTLGQIFIKSY YTIFDKDNLQIGFVRSKEERRNNKKDDHFRRSFLNLRTKRSSDNARQRGTYSGPLLV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_0618600.fa Sequence name : PKNH_0618600 Sequence length : 477 VALUES OF COMPUTED PARAMETERS Coef20 : 4.572 CoefTot : -0.227 ChDiff : -5 ZoneTo : 42 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.765 1.618 0.232 0.585 MesoH : -0.718 0.182 -0.466 0.244 MuHd_075 : 25.186 21.006 7.363 7.128 MuHd_095 : 24.297 19.312 7.639 6.691 MuHd_100 : 17.027 15.288 6.883 5.219 MuHd_105 : 9.992 10.048 5.720 3.302 Hmax_075 : 16.900 18.783 3.146 5.880 Hmax_095 : 17.325 12.338 4.642 7.610 Hmax_100 : 15.300 10.600 4.097 7.610 Hmax_105 : 11.900 21.700 4.440 6.820 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5134 0.4866 DFMC : 0.4806 0.5194 This protein is probably imported in chloroplast. f(Ser) = 0.1429 f(Arg) = 0.0238 CMi = 1.38249 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 477 PKNH_0618600 MTPNMVARIGFLCLLNIWLSTFSSSLLKNTMGSNFYVASHGVDKMQMDFPHRVHGDLTSEKANQKNSPILIKLIKEDIPS 80 KKMTTYYGQVAIGEKSENVINVLFDTGSTEFWIPFENCRGDNFPDSHNKYKRTKSFKNKFNKEGIPTLLEINYLSGKIIG 160 FDGYDTIKLGANLSVPNTNIAFATKIEIPVLEEFKWDGILGLGFENADSRQRGIKPFLDHLKDENILTEMGYKNQFGYYL 240 SDGGGFITFGGVDNRLKRSPEEEVMWSPVSTDMGFWTIDIMGVRKEYAPDVSVKGKVDEVVVKYEGFHDGGKKSIVDTGT 320 FFIYAPKRTMEGYLNDLKVNSCEDKEKLPYIVFQIKSKGIEGIEGSAIIELVMSPNDYVIEYLNEENWTRECVLGIEADE 400 HKDESQIDGWTLGQIFIKSYYTIFDKDNLQIGFVRSKEERRNNKKDDHFRRSFLNLRTKRSSDNARQRGTYSGPLLV 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .................P.............................................................. 320 ................................................................................ 400 ...........................................................P................. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 2 Name Pos Context Score Pred ____________________________v_________________ PKNH_0618600 8 TPNMVAR|IG 0.126 . PKNH_0618600 28 FSSSLLK|NT 0.068 . PKNH_0618600 44 ASHGVDK|MQ 0.072 . PKNH_0618600 52 QMDFPHR|VH 0.083 . PKNH_0618600 61 GDLTSEK|AN 0.061 . PKNH_0618600 65 SEKANQK|NS 0.058 . PKNH_0618600 72 NSPILIK|LI 0.067 . PKNH_0618600 75 ILIKLIK|ED 0.068 . PKNH_0618600 81 KEDIPSK|KM 0.060 . PKNH_0618600 82 EDIPSKK|MT 0.123 . PKNH_0618600 95 QVAIGEK|SE 0.069 . PKNH_0618600 119 IPFENCR|GD 0.077 . PKNH_0618600 129 FPDSHNK|YK 0.065 . PKNH_0618600 131 DSHNKYK|RT 0.070 . PKNH_0618600 132 SHNKYKR|TK 0.251 . PKNH_0618600 134 NKYKRTK|SF 0.094 . PKNH_0618600 137 KRTKSFK|NK 0.083 . PKNH_0618600 139 TKSFKNK|FN 0.148 . PKNH_0618600 142 FKNKFNK|EG 0.073 . PKNH_0618600 157 INYLSGK|II 0.070 . PKNH_0618600 168 DGYDTIK|LG 0.053 . PKNH_0618600 185 NIAFATK|IE 0.070 . PKNH_0618600 195 PVLEEFK|WD 0.064 . PKNH_0618600 210 FENADSR|QR 0.092 . PKNH_0618600 212 NADSRQR|GI 0.100 . PKNH_0618600 215 SRQRGIK|PF 0.185 . PKNH_0618600 222 PFLDHLK|DE 0.068 . PKNH_0618600 233 LTEMGYK|NQ 0.056 . PKNH_0618600 255 FGGVDNR|LK 0.074 . PKNH_0618600 257 GVDNRLK|RS 0.060 . PKNH_0618600 258 VDNRLKR|SP 0.780 *ProP* PKNH_0618600 284 IDIMGVR|KE 0.070 . PKNH_0618600 285 DIMGVRK|EY 0.076 . PKNH_0618600 294 APDVSVK|GK 0.074 . PKNH_0618600 296 DVSVKGK|VD 0.085 . PKNH_0618600 303 VDEVVVK|YE 0.072 . PKNH_0618600 312 GFHDGGK|KS 0.061 . PKNH_0618600 313 FHDGGKK|SI 0.145 . PKNH_0618600 327 FFIYAPK|RT 0.060 . PKNH_0618600 328 FIYAPKR|TM 0.214 . PKNH_0618600 338 GYLNDLK|VN 0.054 . PKNH_0618600 345 VNSCEDK|EK 0.067 . PKNH_0618600 347 SCEDKEK|LP 0.067 . PKNH_0618600 356 YIVFQIK|SK 0.092 . PKNH_0618600 358 VFQIKSK|GI 0.096 . PKNH_0618600 390 NEENWTR|EC 0.076 . PKNH_0618600 402 IEADEHK|DE 0.085 . PKNH_0618600 418 LGQIFIK|SY 0.093 . PKNH_0618600 426 YYTIFDK|DN 0.066 . PKNH_0618600 435 LQIGFVR|SK 0.128 . PKNH_0618600 437 IGFVRSK|EE 0.058 . PKNH_0618600 440 VRSKEER|RN 0.125 . PKNH_0618600 441 RSKEERR|NN 0.118 . PKNH_0618600 444 EERRNNK|KD 0.143 . PKNH_0618600 445 ERRNNKK|DD 0.121 . PKNH_0618600 450 KKDDHFR|RS 0.095 . PKNH_0618600 451 KDDHFRR|SF 0.218 . PKNH_0618600 457 RSFLNLR|TK 0.072 . PKNH_0618600 459 FLNLRTK|RS 0.068 . PKNH_0618600 460 LNLRTKR|SS 0.766 *ProP* PKNH_0618600 466 RSSDNAR|QR 0.144 . PKNH_0618600 468 SDNARQR|GT 0.132 . ____________________________^_________________

  • Fasta :-

    >PKNH_0618600 ATGACGCCCAACATGGTTGCGCGAATTGGCTTCTTGTGCCTTCTGAACATATGGCTAAGT ACATTTTCATCTTCCCTTCTGAAGAATACAATGGGGAGCAACTTTTACGTTGCGTCCCAT GGGGTAGATAAAATGCAGATGGATTTTCCGCATCGCGTGCATGGTGATCTTACCTCAGAA AAGGCCAACCAAAAGAACAGCCCCATTTTAATCAAATTGATCAAGGAAGACATACCATCA AAAAAAATGACAACATACTATGGCCAAGTGGCCATCGGGGAGAAATCGGAAAATGTGATA AATGTTTTATTCGACACGGGTTCTACTGAGTTTTGGATTCCTTTCGAAAATTGTAGAGGA GATAATTTTCCCGACTCTCACAATAAATATAAGCGCACGAAATCATTTAAAAATAAATTT AACAAGGAAGGCATCCCAACGTTGTTGGAGATTAATTATCTCAGTGGGAAAATCATCGGG TTTGACGGATACGACACCATAAAGTTAGGCGCAAATCTGTCCGTTCCGAACACAAACATT GCCTTTGCTACGAAGATAGAAATACCCGTCTTAGAAGAATTTAAGTGGGATGGTATTTTA GGTCTCGGGTTTGAGAACGCGGATTCAAGGCAGCGCGGGATTAAGCCTTTCTTGGACCAT TTGAAGGATGAAAATATCTTAACAGAGATGGGCTACAAGAACCAGTTTGGCTACTACCTA TCTGACGGAGGGGGATTTATCACCTTCGGAGGGGTGGACAATCGGTTGAAGAGATCACCC GAGGAGGAAGTTATGTGGAGCCCCGTCTCGACCGACATGGGTTTTTGGACAATTGACATC ATGGGAGTAAGGAAGGAATACGCACCAGATGTTAGCGTCAAAGGGAAGGTGGACGAGGTT GTCGTGAAGTACGAAGGTTTTCATGATGGAGGGAAGAAGTCCATTGTTGACACAGGGACG TTCTTCATATATGCTCCGAAGAGAACAATGGAAGGTTACCTGAACGATTTGAAAGTAAAT TCTTGTGAGGATAAAGAGAAGCTCCCTTATATTGTATTTCAAATAAAGTCCAAGGGAATT GAAGGGATAGAAGGTTCAGCCATCATCGAATTGGTTATGTCGCCAAACGACTACGTTATT GAGTATTTGAATGAAGAAAACTGGACCAGAGAATGCGTCCTCGGAATTGAAGCGGACGAA CACAAGGACGAAAGCCAAATAGACGGATGGACACTGGGACAAATATTTATAAAATCATAC TACACCATTTTCGATAAGGACAATTTACAAATAGGCTTCGTTAGGAGTAAAGAAGAAAGA AGAAACAATAAAAAGGATGACCATTTTAGGAGGTCATTTCTTAACTTAAGGACAAAGAGG AGCAGTGATAATGCCCGTCAGAGAGGGACTTACAGTGGACCCCTCTTAGTTTAA
  • Download Fasta

  • Fasta :-

    MTPNMVARIGFLCLLNIWLSTFSSSLLKNTMGSNFYVASHGVDKMQMDFPHRVHGDLTSE KANQKNSPILIKLIKEDIPSKKMTTYYGQVAIGEKSENVINVLFDTGSTEFWIPFENCRG DNFPDSHNKYKRTKSFKNKFNKEGIPTLLEINYLSGKIIGFDGYDTIKLGANLSVPNTNI AFATKIEIPVLEEFKWDGILGLGFENADSRQRGIKPFLDHLKDENILTEMGYKNQFGYYL SDGGGFITFGGVDNRLKRSPEEEVMWSPVSTDMGFWTIDIMGVRKEYAPDVSVKGKVDEV VVKYEGFHDGGKKSIVDTGTFFIYAPKRTMEGYLNDLKVNSCEDKEKLPYIVFQIKSKGI EGIEGSAIIELVMSPNDYVIEYLNEENWTRECVLGIEADEHKDESQIDGWTLGQIFIKSY YTIFDKDNLQIGFVRSKEERRNNKKDDHFRRSFLNLRTKRSSDNARQRGTYSGPLLV

  • title: catalytic residue
  • coordinates: D105,D317
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PKNH_0618600314 SGGKKSIVDT0.992unspPKNH_0618600314 SGGKKSIVDT0.992unspPKNH_0618600314 SGGKKSIVDT0.992unspPKNH_0618600341 SLKVNSCEDK0.996unspPKNH_0618600374 SELVMSPNDY0.995unspPKNH_0618600405 SHKDESQIDG0.994unspPKNH_0618600436 SGFVRSKEER0.993unspPKNH_0618600135 SKRTKSFKNK0.996unspPKNH_0618600259 SRLKRSPEEE0.997unsp

PK10_3450w      PKH_061820      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India