PKNH_0731000 | M18 aspartyl aminopeptidase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004177      GO:0008270      

  • Computed_GO_Functions:  aminopeptidase activity      zinc ion binding      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PKNH_0731000OTHER0.9998650.0000850.000050
No Results

  • Fasta :-

    >PKNH_0731000 MQPTDDTMEKKVRDYAQGAVKFIKKSGSNFLACKNLREKLEEKGFKRIQEGEKWDLRKNE GYVFSKQNRNICGFFIGKDFNMEKGSILISIGHVDTCCLKISPNNNTVKSKVNQLNVECY GSGLWHTWFDRSLGLSGQVVYKKDDKLVEKLIQINRSIIFLPSLAIHLQNRTRFEFSVKV NFENHLKPIISTVLYDQLIKGKEKQNTDAFTEDTLHAEKIQDKCLNGDDASPSCLSHQEN PNSSPLLYTLAKELQCEEKDILDFELCLMDVNEPCFTGAYEEFIEGARFDNLLGSYCVFE AFAEMIDMLKGKTPPSDGAVLPPEAHANLYICIGYDHEEIGSLSEVGAQSYFTQNFIKRI LTAISSSQVGQNTHPSSPTSIDELYGSLMSRSLILNVDMAHCSHPNYPETVQANHQLFFH EGIAIKYNTNRNYATSPYYTCLLKRTFELFTSKFNEKIKYQNFMVKNDTPCGSTVGSMVA SNLSMPGVDIGIPQLAMHSIREIAAVRDIYYLVKGILAFYTYYSHVHASCVPDE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_0731000.fa Sequence name : PKNH_0731000 Sequence length : 534 VALUES OF COMPUTED PARAMETERS Coef20 : 3.200 CoefTot : -0.408 ChDiff : -9 ZoneTo : 4 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.212 1.341 0.116 0.476 MesoH : -0.188 0.398 -0.259 0.261 MuHd_075 : 22.713 8.707 4.960 2.323 MuHd_095 : 45.769 24.081 11.644 7.575 MuHd_100 : 40.077 21.166 9.713 7.246 MuHd_105 : 27.861 14.394 6.104 5.758 Hmax_075 : 0.400 -1.400 -3.038 0.730 Hmax_095 : 2.700 4.300 -1.512 2.310 Hmax_100 : 2.300 4.300 -1.512 2.310 Hmax_105 : -7.437 -3.800 -4.742 0.150 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9231 0.0769 DFMC : 0.9017 0.0983
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 534 PKNH_0731000 MQPTDDTMEKKVRDYAQGAVKFIKKSGSNFLACKNLREKLEEKGFKRIQEGEKWDLRKNEGYVFSKQNRNICGFFIGKDF 80 NMEKGSILISIGHVDTCCLKISPNNNTVKSKVNQLNVECYGSGLWHTWFDRSLGLSGQVVYKKDDKLVEKLIQINRSIIF 160 LPSLAIHLQNRTRFEFSVKVNFENHLKPIISTVLYDQLIKGKEKQNTDAFTEDTLHAEKIQDKCLNGDDASPSCLSHQEN 240 PNSSPLLYTLAKELQCEEKDILDFELCLMDVNEPCFTGAYEEFIEGARFDNLLGSYCVFEAFAEMIDMLKGKTPPSDGAV 320 LPPEAHANLYICIGYDHEEIGSLSEVGAQSYFTQNFIKRILTAISSSQVGQNTHPSSPTSIDELYGSLMSRSLILNVDMA 400 HCSHPNYPETVQANHQLFFHEGIAIKYNTNRNYATSPYYTCLLKRTFELFTSKFNEKIKYQNFMVKNDTPCGSTVGSMVA 480 SNLSMPGVDIGIPQLAMHSIREIAAVRDIYYLVKGILAFYTYYSHVHASCVPDE 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ...................................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_0731000 10 TDDTMEK|KV 0.078 . PKNH_0731000 11 DDTMEKK|VR 0.094 . PKNH_0731000 13 TMEKKVR|DY 0.153 . PKNH_0731000 21 YAQGAVK|FI 0.076 . PKNH_0731000 24 GAVKFIK|KS 0.073 . PKNH_0731000 25 AVKFIKK|SG 0.142 . PKNH_0731000 34 SNFLACK|NL 0.067 . PKNH_0731000 37 LACKNLR|EK 0.074 . PKNH_0731000 39 CKNLREK|LE 0.069 . PKNH_0731000 43 REKLEEK|GF 0.068 . PKNH_0731000 46 LEEKGFK|RI 0.076 . PKNH_0731000 47 EEKGFKR|IQ 0.186 . PKNH_0731000 53 RIQEGEK|WD 0.060 . PKNH_0731000 57 GEKWDLR|KN 0.090 . PKNH_0731000 58 EKWDLRK|NE 0.093 . PKNH_0731000 66 EGYVFSK|QN 0.065 . PKNH_0731000 69 VFSKQNR|NI 0.123 . PKNH_0731000 78 CGFFIGK|DF 0.067 . PKNH_0731000 84 KDFNMEK|GS 0.062 . PKNH_0731000 100 VDTCCLK|IS 0.053 . PKNH_0731000 109 PNNNTVK|SK 0.097 . PKNH_0731000 111 NNTVKSK|VN 0.062 . PKNH_0731000 131 WHTWFDR|SL 0.156 . PKNH_0731000 142 SGQVVYK|KD 0.073 . PKNH_0731000 143 GQVVYKK|DD 0.123 . PKNH_0731000 146 VYKKDDK|LV 0.070 . PKNH_0731000 150 DDKLVEK|LI 0.064 . PKNH_0731000 156 KLIQINR|SI 0.106 . PKNH_0731000 171 AIHLQNR|TR 0.073 . PKNH_0731000 173 HLQNRTR|FE 0.107 . PKNH_0731000 179 RFEFSVK|VN 0.058 . PKNH_0731000 187 NFENHLK|PI 0.059 . PKNH_0731000 200 LYDQLIK|GK 0.063 . PKNH_0731000 202 DQLIKGK|EK 0.058 . PKNH_0731000 204 LIKGKEK|QN 0.071 . PKNH_0731000 219 DTLHAEK|IQ 0.059 . PKNH_0731000 223 AEKIQDK|CL 0.064 . PKNH_0731000 252 LLYTLAK|EL 0.072 . PKNH_0731000 259 ELQCEEK|DI 0.082 . PKNH_0731000 288 EFIEGAR|FD 0.069 . PKNH_0731000 310 EMIDMLK|GK 0.057 . PKNH_0731000 312 IDMLKGK|TP 0.063 . PKNH_0731000 358 FTQNFIK|RI 0.069 . PKNH_0731000 359 TQNFIKR|IL 0.239 . PKNH_0731000 391 YGSLMSR|SL 0.142 . PKNH_0731000 426 HEGIAIK|YN 0.062 . PKNH_0731000 431 IKYNTNR|NY 0.095 . PKNH_0731000 444 YYTCLLK|RT 0.056 . PKNH_0731000 445 YTCLLKR|TF 0.127 . PKNH_0731000 453 FELFTSK|FN 0.070 . PKNH_0731000 457 TSKFNEK|IK 0.071 . PKNH_0731000 459 KFNEKIK|YQ 0.072 . PKNH_0731000 466 YQNFMVK|ND 0.076 . PKNH_0731000 501 LAMHSIR|EI 0.139 . PKNH_0731000 507 REIAAVR|DI 0.104 . PKNH_0731000 514 DIYYLVK|GI 0.063 . ____________________________^_________________

  • Fasta :-

    >PKNH_0731000 ATGCAACCAACCGACGACACCATGGAAAAGAAAGTGCGCGATTATGCGCAGGGTGCAGTG AAATTCATAAAAAAGAGCGGAAGTAACTTCCTGGCTTGTAAGAACCTGAGGGAGAAACTT GAAGAAAAGGGATTCAAGCGAATCCAAGAAGGAGAAAAATGGGATCTACGAAAAAATGAA GGTTACGTATTCAGTAAACAGAATAGAAACATATGTGGCTTCTTCATTGGGAAGGACTTT AATATGGAGAAAGGCTCCATCCTCATTTCCATTGGCCACGTAGACACCTGTTGCTTGAAA ATATCTCCTAACAACAACACCGTTAAAAGTAAGGTGAATCAGTTAAATGTGGAGTGCTAC GGATCTGGCTTGTGGCATACGTGGTTTGATCGTAGCTTAGGTTTGTCTGGTCAGGTAGTC TACAAGAAAGACGACAAGCTCGTGGAGAAACTCATCCAGATTAACAGATCCATTATTTTC CTTCCCAGTCTTGCTATCCACCTGCAGAACAGGACCAGGTTTGAATTCTCAGTCAAAGTT AATTTTGAGAACCACTTGAAGCCCATCATCTCCACCGTTCTGTATGATCAGTTGATCAAA GGGAAAGAGAAGCAGAACACCGATGCCTTTACAGAAGATACTTTACATGCGGAGAAAATA CAAGACAAATGTCTGAATGGAGATGACGCCTCGCCCAGTTGCCTCTCCCATCAGGAAAAT CCAAACTCCTCCCCACTCCTTTACACACTAGCGAAAGAGTTGCAGTGCGAAGAAAAAGAT ATCCTAGACTTCGAGTTGTGCTTAATGGATGTAAATGAACCCTGCTTCACGGGGGCTTAT GAGGAATTCATCGAAGGGGCGAGGTTTGATAATTTGCTAGGTTCGTATTGCGTCTTTGAG GCCTTCGCGGAGATGATAGATATGCTAAAGGGGAAAACACCACCTTCAGATGGAGCAGTC CTCCCCCCTGAGGCACACGCAAACCTGTACATCTGCATTGGCTACGACCATGAAGAAATA GGCTCCCTCAGCGAAGTCGGTGCGCAGTCTTACTTTACGCAAAATTTCATCAAACGAATT TTAACAGCCATTTCATCTTCCCAAGTAGGGCAGAACACACACCCCTCTTCTCCTACTTCT ATCGACGAGCTCTATGGAAGTCTCATGAGCAGGTCTCTCATACTCAACGTGGACATGGCA CACTGCAGTCACCCCAACTACCCAGAAACAGTGCAGGCTAACCACCAGTTATTTTTTCAC GAAGGAATTGCTATCAAGTACAATACAAATAGAAACTACGCCACCTCGCCCTATTACACA TGTCTACTAAAGAGGACCTTCGAATTGTTCACTTCCAAGTTCAATGAAAAAATAAAGTAC CAGAACTTCATGGTGAAGAATGACACCCCCTGTGGTAGCACTGTGGGTTCTATGGTTGCT TCGAACCTTTCCATGCCGGGTGTTGATATTGGCATTCCTCAGCTAGCCATGCATTCGATA AGAGAGATAGCCGCTGTGAGGGATATCTACTACCTGGTCAAGGGTATCTTGGCCTTCTAC ACCTACTACAGTCATGTGCATGCCTCCTGTGTACCCGATGAGTAG
  • Download Fasta

  • Fasta :-

    MQPTDDTMEKKVRDYAQGAVKFIKKSGSNFLACKNLREKLEEKGFKRIQEGEKWDLRKNE GYVFSKQNRNICGFFIGKDFNMEKGSILISIGHVDTCCLKISPNNNTVKSKVNQLNVECY GSGLWHTWFDRSLGLSGQVVYKKDDKLVEKLIQINRSIIFLPSLAIHLQNRTRFEFSVKV NFENHLKPIISTVLYDQLIKGKEKQNTDAFTEDTLHAEKIQDKCLNGDDASPSCLSHQEN PNSSPLLYTLAKELQCEEKDILDFELCLMDVNEPCFTGAYEEFIEGARFDNLLGSYCVFE AFAEMIDMLKGKTPPSDGAVLPPEAHANLYICIGYDHEEIGSLSEVGAQSYFTQNFIKRI LTAISSSQVGQNTHPSSPTSIDELYGSLMSRSLILNVDMAHCSHPNYPETVQANHQLFFH EGIAIKYNTNRNYATSPYYTCLLKRTFELFTSKFNEKIKYQNFMVKNDTPCGSTVGSMVA SNLSMPGVDIGIPQLAMHSIREIAAVRDIYYLVKGILAFYTYYSHVHASCVPDE

  • title: metal binding site
  • coordinates: H93,D290,E338,E339,D398,H498
No Results
No Results
IDSitePeptideScoreMethod
PKNH_0731000380 SSSPTSIDEL0.994unsp

PK9_3080c      PKH_073050      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India