PKNH_0815400 | methionine aminopeptidase 1b, putative

_IDPredictionOTHERSPmTPCS_Position
PKNH_0815400OTHER0.9999300.0000030.000067
No Results

  • Fasta :-

    >PKNH_0815400 MEHEKRESKVEDRDDKYQQNDSAPGTITQNAENENTCNGCGKELAKKLSCPICLKKKIHS YFCTQECFKISWKEHVEKVHEKWKKEEEEEKKKLMQIVKKKLSPEHFDPTNRKYWIYDRH LKNFLNFVFTGNLRPWPITKMNAVPLHIKRPDYAITSIPESELKYKRKSDIYVNSQEEIE NIREACLLGRRTLDYAHSLVAPGVTTDEIDKKVHNFIIEHNAYPSTLNYYEFPKSCCTSV NEIVCHGIPDLRPLQNGDIINIDISVFFKGVHADLNETFFVGDLDQVPKEAKELVQTCYF SLMESIKKCKPGMLYKNIGNIIDSYVSKKGFSVVRTYSGHGVGKLFHSNPTVPHFKKNKA VGIMKAGHVFTIEPMINQGHYSDVLWPDKWTSATSDGKLSAQFEHTLLITDKGVEILTKR LADSPSLGFDTRDDLYEV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_0815400.fa Sequence name : PKNH_0815400 Sequence length : 438 VALUES OF COMPUTED PARAMETERS Coef20 : 2.634 CoefTot : 0.000 ChDiff : 2 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.659 1.106 -0.006 0.501 MesoH : -0.784 0.163 -0.451 0.184 MuHd_075 : 6.770 9.717 2.406 1.164 MuHd_095 : 7.236 0.306 1.184 3.026 MuHd_100 : 13.001 3.122 2.933 4.261 MuHd_105 : 19.331 7.637 4.880 5.294 Hmax_075 : -35.000 -10.150 -11.076 -3.570 Hmax_095 : -37.713 -13.563 -11.778 -3.430 Hmax_100 : -30.800 -14.300 -10.855 -2.270 Hmax_105 : -31.150 -12.600 -10.548 -1.657 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9958 0.0042 DFMC : 0.9925 0.0075
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 438 PKNH_0815400 MEHEKRESKVEDRDDKYQQNDSAPGTITQNAENENTCNGCGKELAKKLSCPICLKKKIHSYFCTQECFKISWKEHVEKVH 80 EKWKKEEEEEKKKLMQIVKKKLSPEHFDPTNRKYWIYDRHLKNFLNFVFTGNLRPWPITKMNAVPLHIKRPDYAITSIPE 160 SELKYKRKSDIYVNSQEEIENIREACLLGRRTLDYAHSLVAPGVTTDEIDKKVHNFIIEHNAYPSTLNYYEFPKSCCTSV 240 NEIVCHGIPDLRPLQNGDIINIDISVFFKGVHADLNETFFVGDLDQVPKEAKELVQTCYFSLMESIKKCKPGMLYKNIGN 320 IIDSYVSKKGFSVVRTYSGHGVGKLFHSNPTVPHFKKNKAVGIMKAGHVFTIEPMINQGHYSDVLWPDKWTSATSDGKLS 400 AQFEHTLLITDKGVEILTKRLADSPSLGFDTRDDLYEV 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ...................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_0815400 5 --MEHEK|RE 0.069 . PKNH_0815400 6 -MEHEKR|ES 0.151 . PKNH_0815400 9 HEKRESK|VE 0.094 . PKNH_0815400 13 ESKVEDR|DD 0.120 . PKNH_0815400 16 VEDRDDK|YQ 0.083 . PKNH_0815400 42 TCNGCGK|EL 0.083 . PKNH_0815400 46 CGKELAK|KL 0.063 . PKNH_0815400 47 GKELAKK|LS 0.086 . PKNH_0815400 55 SCPICLK|KK 0.056 . PKNH_0815400 56 CPICLKK|KI 0.116 . PKNH_0815400 57 PICLKKK|IH 0.096 . PKNH_0815400 69 CTQECFK|IS 0.060 . PKNH_0815400 73 CFKISWK|EH 0.058 . PKNH_0815400 78 WKEHVEK|VH 0.069 . PKNH_0815400 82 VEKVHEK|WK 0.074 . PKNH_0815400 84 KVHEKWK|KE 0.074 . PKNH_0815400 85 VHEKWKK|EE 0.103 . PKNH_0815400 91 KEEEEEK|KK 0.057 . PKNH_0815400 92 EEEEEKK|KL 0.106 . PKNH_0815400 93 EEEEKKK|LM 0.081 . PKNH_0815400 99 KLMQIVK|KK 0.058 . PKNH_0815400 100 LMQIVKK|KL 0.143 . PKNH_0815400 101 MQIVKKK|LS 0.105 . PKNH_0815400 112 HFDPTNR|KY 0.081 . PKNH_0815400 113 FDPTNRK|YW 0.084 . PKNH_0815400 119 KYWIYDR|HL 0.082 . PKNH_0815400 122 IYDRHLK|NF 0.100 . PKNH_0815400 134 VFTGNLR|PW 0.067 . PKNH_0815400 140 RPWPITK|MN 0.070 . PKNH_0815400 149 AVPLHIK|RP 0.061 . PKNH_0815400 150 VPLHIKR|PD 0.157 . PKNH_0815400 164 IPESELK|YK 0.065 . PKNH_0815400 166 ESELKYK|RK 0.078 . PKNH_0815400 167 SELKYKR|KS 0.177 . PKNH_0815400 168 ELKYKRK|SD 0.157 . PKNH_0815400 183 EEIENIR|EA 0.077 . PKNH_0815400 190 EACLLGR|RT 0.086 . PKNH_0815400 191 ACLLGRR|TL 0.087 . PKNH_0815400 211 TTDEIDK|KV 0.066 . PKNH_0815400 212 TDEIDKK|VH 0.099 . PKNH_0815400 234 NYYEFPK|SC 0.087 . PKNH_0815400 252 HGIPDLR|PL 0.076 . PKNH_0815400 269 DISVFFK|GV 0.131 . PKNH_0815400 289 DLDQVPK|EA 0.067 . PKNH_0815400 292 QVPKEAK|EL 0.059 . PKNH_0815400 307 SLMESIK|KC 0.069 . PKNH_0815400 308 LMESIKK|CK 0.077 . PKNH_0815400 310 ESIKKCK|PG 0.063 . PKNH_0815400 316 KPGMLYK|NI 0.091 . PKNH_0815400 328 IDSYVSK|KG 0.079 . PKNH_0815400 329 DSYVSKK|GF 0.157 . PKNH_0815400 335 KGFSVVR|TY 0.107 . PKNH_0815400 344 SGHGVGK|LF 0.071 . PKNH_0815400 356 PTVPHFK|KN 0.071 . PKNH_0815400 357 TVPHFKK|NK 0.112 . PKNH_0815400 359 PHFKKNK|AV 0.108 . PKNH_0815400 365 KAVGIMK|AG 0.060 . PKNH_0815400 389 DVLWPDK|WT 0.063 . PKNH_0815400 398 SATSDGK|LS 0.066 . PKNH_0815400 412 TLLITDK|GV 0.088 . PKNH_0815400 419 GVEILTK|RL 0.062 . PKNH_0815400 420 VEILTKR|LA 0.125 . PKNH_0815400 432 SLGFDTR|DD 0.095 . ____________________________^_________________

  • Fasta :-

    >PKNH_0815400 ATGGAACATGAGAAGCGCGAGTCCAAGGTGGAGGACAGAGACGATAAATACCAACAGAAC GACAGCGCCCCAGGCACCATCACACAGAATGCCGAAAATGAAAACACCTGCAACGGGTGT GGGAAGGAGCTAGCCAAAAAATTGAGCTGCCCAATATGTCTGAAAAAAAAAATTCACAGC TACTTTTGCACACAGGAATGTTTCAAAATTTCGTGGAAAGAACATGTGGAAAAAGTACAT GAAAAGTGGAAAAAGGAGGAAGAAGAAGAAAAGAAAAAGTTAATGCAAATCGTAAAGAAG AAATTATCTCCAGAACATTTCGATCCAACGAACAGAAAATATTGGATTTATGATAGACAT TTGAAAAATTTCCTTAATTTTGTATTTACAGGGAATTTGAGACCTTGGCCAATAACAAAA ATGAATGCCGTACCGTTACATATAAAGAGGCCAGATTATGCAATAACATCCATCCCCGAA TCGGAGTTAAAGTATAAAAGGAAAAGCGATATATATGTGAATAGCCAGGAGGAAATAGAG AATATAAGGGAGGCATGTCTTTTGGGGAGAAGGACATTGGATTACGCTCATTCGTTAGTA GCACCAGGAGTAACAACTGATGAAATAGACAAAAAGGTTCATAATTTTATTATAGAGCAT AATGCTTACCCATCAACTTTAAATTATTATGAATTCCCCAAATCGTGTTGTACATCAGTT AACGAAATTGTGTGTCATGGGATTCCCGACTTGAGACCGTTACAAAATGGGGATATCATC AACATTGACATAAGCGTCTTCTTCAAAGGGGTGCATGCAGACCTGAATGAAACCTTCTTT GTTGGTGATTTGGACCAAGTGCCAAAGGAGGCTAAGGAACTTGTACAGACATGTTACTTT TCCCTAATGGAATCAATAAAAAAATGCAAACCAGGGATGTTATATAAAAATATTGGCAAC ATCATAGATTCCTATGTGTCCAAAAAAGGATTTTCCGTGGTACGTACTTACTCTGGTCAT GGGGTTGGAAAATTGTTTCATTCCAATCCAACTGTTCCTCATTTTAAAAAAAATAAAGCC GTTGGAATTATGAAAGCTGGACATGTGTTTACCATTGAACCAATGATCAATCAGGGACAC TACTCTGATGTCTTGTGGCCCGACAAGTGGACCAGCGCCACTTCAGATGGGAAATTATCT GCCCAGTTTGAGCACACTTTATTAATTACAGACAAGGGCGTCGAAATTTTGACCAAACGG TTGGCAGATTCGCCAAGTCTGGGATTCGACACAAGGGACGATTTGTATGAGGTGTAA
  • Download Fasta

  • Fasta :-

    MEHEKRESKVEDRDDKYQQNDSAPGTITQNAENENTCNGCGKELAKKLSCPICLKKKIHS YFCTQECFKISWKEHVEKVHEKWKKEEEEEKKKLMQIVKKKLSPEHFDPTNRKYWIYDRH LKNFLNFVFTGNLRPWPITKMNAVPLHIKRPDYAITSIPESELKYKRKSDIYVNSQEEIE NIREACLLGRRTLDYAHSLVAPGVTTDEIDKKVHNFIIEHNAYPSTLNYYEFPKSCCTSV NEIVCHGIPDLRPLQNGDIINIDISVFFKGVHADLNETFFVGDLDQVPKEAKELVQTCYF SLMESIKKCKPGMLYKNIGNIIDSYVSKKGFSVVRTYSGHGVGKLFHSNPTVPHFKKNKA VGIMKAGHVFTIEPMINQGHYSDVLWPDKWTSATSDGKLSAQFEHTLLITDKGVEILTKR LADSPSLGFDTRDDLYEV

  • title: active site
  • coordinates: H246,D263,D274,H340,E373,E404
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PKNH_0815400103 SKKKLSPEHF0.996unspPKNH_0815400103 SKKKLSPEHF0.996unspPKNH_0815400103 SKKKLSPEHF0.996unspPKNH_0815400327 SDSYVSKKGF0.994unspPKNH_0815400332 SKKGFSVVRT0.99unspPKNH_08154008 SEKRESKVED0.997unspPKNH_081540071 SCFKISWKEH0.996unsp

PK10_1420w      PKH_081530      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India