PKNH_0820100 | signal peptidase complex subunit 2, putative

No Results
No Results

  • Fasta :-

    >PKNH_0820100 MPKAQVDDDNRGSTYLVTNLYSEQELKKVAQDYISEKIRDQNFSENIQYSNIRIFLSLLL ISIGSYCTIFVQYKKEPLLMIKLLIAFFIVSTILFFWEIVFFEDIFMILRTNNGGVVKLF FELDIQKSALVLTYKMNKQKHSTSFELRKLFNEDGFLVQNYADAMLKQFISNHGKIFKLC DNKKKA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_0820100.fa Sequence name : PKNH_0820100 Sequence length : 186 VALUES OF COMPUTED PARAMETERS Coef20 : 3.433 CoefTot : -0.380 ChDiff : 4 ZoneTo : 6 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.153 2.653 0.492 0.904 MesoH : 0.491 1.332 -0.093 0.510 MuHd_075 : 8.391 8.150 1.751 1.687 MuHd_095 : 23.170 12.486 5.167 5.002 MuHd_100 : 17.458 9.781 4.100 4.274 MuHd_105 : 10.006 7.977 2.515 2.956 Hmax_075 : -2.800 3.587 -2.749 0.998 Hmax_095 : -1.312 4.112 -2.175 1.864 Hmax_100 : -4.900 2.800 -2.622 1.560 Hmax_105 : -2.800 4.667 -1.597 2.007 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9482 0.0518 DFMC : 0.9725 0.0275
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 186 PKNH_0820100 MPKAQVDDDNRGSTYLVTNLYSEQELKKVAQDYISEKIRDQNFSENIQYSNIRIFLSLLLISIGSYCTIFVQYKKEPLLM 80 IKLLIAFFIVSTILFFWEIVFFEDIFMILRTNNGGVVKLFFELDIQKSALVLTYKMNKQKHSTSFELRKLFNEDGFLVQN 160 YADAMLKQFISNHGKIFKLCDNKKKA 240 ................................................................................ 80 ................................................................................ 160 .......................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_0820100 3 ----MPK|AQ 0.061 . PKNH_0820100 11 QVDDDNR|GS 0.072 . PKNH_0820100 27 YSEQELK|KV 0.069 . PKNH_0820100 28 SEQELKK|VA 0.116 . PKNH_0820100 37 QDYISEK|IR 0.066 . PKNH_0820100 39 YISEKIR|DQ 0.146 . PKNH_0820100 53 IQYSNIR|IF 0.076 . PKNH_0820100 74 TIFVQYK|KE 0.056 . PKNH_0820100 75 IFVQYKK|EP 0.068 . PKNH_0820100 82 EPLLMIK|LL 0.060 . PKNH_0820100 110 DIFMILR|TN 0.071 . PKNH_0820100 118 NNGGVVK|LF 0.064 . PKNH_0820100 127 FELDIQK|SA 0.064 . PKNH_0820100 135 ALVLTYK|MN 0.068 . PKNH_0820100 138 LTYKMNK|QK 0.059 . PKNH_0820100 140 YKMNKQK|HS 0.072 . PKNH_0820100 148 STSFELR|KL 0.108 . PKNH_0820100 149 TSFELRK|LF 0.084 . PKNH_0820100 167 YADAMLK|QF 0.056 . PKNH_0820100 175 FISNHGK|IF 0.065 . PKNH_0820100 178 NHGKIFK|LC 0.065 . PKNH_0820100 183 FKLCDNK|KK 0.055 . PKNH_0820100 184 KLCDNKK|KA 0.115 . PKNH_0820100 185 LCDNKKK|A- 0.116 . ____________________________^_________________

  • Fasta :-

    >PKNH_0820100 ATGCCGAAAGCCCAAGTGGACGATGATAATAGGGGTAGCACATACCTCGTCACCAACCTG TACAGCGAACAAGAGCTGAAAAAAGTTGCGCAGGACTACATAAGCGAAAAAATAAGGGAC CAAAATTTTTCAGAGAATATCCAGTACTCTAACATTCGAATTTTTCTAAGTTTGCTTCTC ATATCGATTGGATCCTACTGCACCATCTTCGTGCAGTACAAAAAGGAACCGTTGCTTATG ATAAAATTGCTCATCGCCTTCTTCATCGTCTCGACAATTCTCTTCTTTTGGGAGATTGTC TTTTTCGAAGACATCTTCATGATTTTGAGGACCAACAATGGCGGAGTTGTGAAGCTGTTC TTCGAGCTGGACATCCAGAAGAGCGCCCTCGTATTAACCTACAAGATGAATAAACAAAAG CATAGCACATCGTTTGAGCTTCGCAAGCTGTTCAACGAAGATGGATTCCTCGTCCAGAAT TACGCAGACGCCATGTTGAAGCAGTTCATTTCAAATCACGGGAAGATTTTCAAACTCTGT GATAATAAGAAAAAGGCCTGA
  • Download Fasta

  • Fasta :-

    No Results
    No Results
No Results
No Results
No Results

PK3_1810w      PKH_081990      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India