_IDPredictionOTHERSPmTPCS_Position
PKNH_0914500SP0.0277770.9700710.002152CS pos: 26-27. ASC-SA. Pr: 0.8101
No Results
  • Fasta :-

    >PKNH_0914500 MMRRAFIWFIYLISLFFLWKNELASCSANNNQGKENYLNRTINILNAGKNIAKRYGHSQL KPVHILSALAKSDYGSNLLKENSVNASNLKQYLDTALEQTRAGPPLDNKSKIAYSDQVKE VLAEAEALANKYKSQKVDVEHLLSGLMNDELVNEILNEVYLTDEAVKGILKSKLEKTKKD KDGKSGGLYLEQFGSNLNEKVRNGKLQGIYGRDEEIRAVIESLLRYNKNSPVLVGQPGTG KTTIVEGLVYRIEKGDVPKELRGYTVISLNFRKFTSGTSYRGEFETRMKNIIKELKNKKN KIILFVDEIHLLLGAGKAEGGTDAANLLKPVLSKGEIKLIGATTIAEYRKFIESCSAFER RFEKILVEPPSVENTIKILRSLKSKYESFYGIHITDKALVAAAKVSDRFIKDRYLPDKAI DLLNKACSFLQVQLSGKPRIIDVTEREIERLAYEISTLEMDVDKVSKRKYNNLIKEFENK KDLLRTYYEEYVISGERLKRKKEAEKRLNELKELAQNYISANKEPPIELQNSLKDAQEKY MEVYKETLAYVEAKTHNAMNVDAVYQEHVSYIYLRDSGMPLGSLSFESSKGALKLYNSLS KSIIGNEDIIKSLSDAVVKAATGMKDPEKPIGTFLFLGPTGVGKTELAKTLAIELFSSKD NLIRVNMSEFTEAHSVSKITGSPPGYVGFSDSGQLTEAVRERPHSVVLFDELEKAHPDVF KVLLQILGDGYINDNHRRNIDFSNTIIIMTSNLGAELFKKKLFFDANNSDTPEYKRVFDD LRIQLIKKCKKVFKPEFVNRIDKIGIFEPLSKKNLREIVKLRFKKLEKRLEEKNIHVSVS EKAVDYIIDQSYDPELGARPTLIFIESVIMTKFAIMYLKKELVDDMDVHVDFNKAANNLV INLTAV
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_0914500.fa Sequence name : PKNH_0914500 Sequence length : 906 VALUES OF COMPUTED PARAMETERS Coef20 : 5.189 CoefTot : 0.485 ChDiff : 17 ZoneTo : 21 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.424 1.812 0.072 0.726 MesoH : -0.514 0.278 -0.398 0.193 MuHd_075 : 24.176 11.208 5.163 5.393 MuHd_095 : 29.224 16.032 6.466 6.271 MuHd_100 : 26.247 14.314 5.089 5.686 MuHd_105 : 24.117 13.009 4.279 5.627 Hmax_075 : 20.213 17.300 2.717 7.000 Hmax_095 : 23.012 21.100 3.626 7.262 Hmax_100 : 24.400 22.100 3.786 8.240 Hmax_105 : 19.075 17.733 2.267 6.545 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.2081 0.7919 DFMC : 0.3745 0.6255 This protein is probably imported in mitochondria. f(Ser) = 0.0476 f(Arg) = 0.0952 CMi = 0.23419 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 906 PKNH_0914500 MMRRAFIWFIYLISLFFLWKNELASCSANNNQGKENYLNRTINILNAGKNIAKRYGHSQLKPVHILSALAKSDYGSNLLK 80 ENSVNASNLKQYLDTALEQTRAGPPLDNKSKIAYSDQVKEVLAEAEALANKYKSQKVDVEHLLSGLMNDELVNEILNEVY 160 LTDEAVKGILKSKLEKTKKDKDGKSGGLYLEQFGSNLNEKVRNGKLQGIYGRDEEIRAVIESLLRYNKNSPVLVGQPGTG 240 KTTIVEGLVYRIEKGDVPKELRGYTVISLNFRKFTSGTSYRGEFETRMKNIIKELKNKKNKIILFVDEIHLLLGAGKAEG 320 GTDAANLLKPVLSKGEIKLIGATTIAEYRKFIESCSAFERRFEKILVEPPSVENTIKILRSLKSKYESFYGIHITDKALV 400 AAAKVSDRFIKDRYLPDKAIDLLNKACSFLQVQLSGKPRIIDVTEREIERLAYEISTLEMDVDKVSKRKYNNLIKEFENK 480 KDLLRTYYEEYVISGERLKRKKEAEKRLNELKELAQNYISANKEPPIELQNSLKDAQEKYMEVYKETLAYVEAKTHNAMN 560 VDAVYQEHVSYIYLRDSGMPLGSLSFESSKGALKLYNSLSKSIIGNEDIIKSLSDAVVKAATGMKDPEKPIGTFLFLGPT 640 GVGKTELAKTLAIELFSSKDNLIRVNMSEFTEAHSVSKITGSPPGYVGFSDSGQLTEAVRERPHSVVLFDELEKAHPDVF 720 KVLLQILGDGYINDNHRRNIDFSNTIIIMTSNLGAELFKKKLFFDANNSDTPEYKRVFDDLRIQLIKKCKKVFKPEFVNR 800 IDKIGIFEPLSKKNLREIVKLRFKKLEKRLEEKNIHVSVSEKAVDYIIDQSYDPELGARPTLIFIESVIMTKFAIMYLKK 880 ELVDDMDVHVDFNKAANNLVINLTAV 960 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 .......................... 960 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_0914500 3 ----MMR|RA 0.093 . PKNH_0914500 4 ---MMRR|AF 0.125 . PKNH_0914500 20 SLFFLWK|NE 0.056 . PKNH_0914500 34 ANNNQGK|EN 0.071 . PKNH_0914500 40 KENYLNR|TI 0.105 . PKNH_0914500 49 NILNAGK|NI 0.058 . PKNH_0914500 53 AGKNIAK|RY 0.069 . PKNH_0914500 54 GKNIAKR|YG 0.304 . PKNH_0914500 61 YGHSQLK|PV 0.073 . PKNH_0914500 71 ILSALAK|SD 0.100 . PKNH_0914500 80 YGSNLLK|EN 0.067 . PKNH_0914500 90 VNASNLK|QY 0.058 . PKNH_0914500 101 TALEQTR|AG 0.075 . PKNH_0914500 109 GPPLDNK|SK 0.076 . PKNH_0914500 111 PLDNKSK|IA 0.067 . PKNH_0914500 119 AYSDQVK|EV 0.078 . PKNH_0914500 131 AEALANK|YK 0.077 . PKNH_0914500 133 ALANKYK|SQ 0.091 . PKNH_0914500 136 NKYKSQK|VD 0.063 . PKNH_0914500 167 LTDEAVK|GI 0.060 . PKNH_0914500 171 AVKGILK|SK 0.058 . PKNH_0914500 173 KGILKSK|LE 0.060 . PKNH_0914500 176 LKSKLEK|TK 0.069 . PKNH_0914500 178 SKLEKTK|KD 0.071 . PKNH_0914500 179 KLEKTKK|DK 0.150 . PKNH_0914500 181 EKTKKDK|DG 0.074 . PKNH_0914500 184 KKDKDGK|SG 0.097 . PKNH_0914500 200 GSNLNEK|VR 0.069 . PKNH_0914500 202 NLNEKVR|NG 0.085 . PKNH_0914500 205 EKVRNGK|LQ 0.151 . PKNH_0914500 212 LQGIYGR|DE 0.097 . PKNH_0914500 217 GRDEEIR|AV 0.165 . PKNH_0914500 225 VIESLLR|YN 0.069 . PKNH_0914500 228 SLLRYNK|NS 0.090 . PKNH_0914500 241 GQPGTGK|TT 0.062 . PKNH_0914500 251 VEGLVYR|IE 0.073 . PKNH_0914500 254 LVYRIEK|GD 0.128 . PKNH_0914500 259 EKGDVPK|EL 0.074 . PKNH_0914500 262 DVPKELR|GY 0.077 . PKNH_0914500 272 VISLNFR|KF 0.090 . PKNH_0914500 273 ISLNFRK|FT 0.091 . PKNH_0914500 281 TSGTSYR|GE 0.105 . PKNH_0914500 287 RGEFETR|MK 0.090 . PKNH_0914500 289 EFETRMK|NI 0.068 . PKNH_0914500 293 RMKNIIK|EL 0.063 . PKNH_0914500 296 NIIKELK|NK 0.057 . PKNH_0914500 298 IKELKNK|KN 0.068 . PKNH_0914500 299 KELKNKK|NK 0.084 . PKNH_0914500 301 LKNKKNK|II 0.075 . PKNH_0914500 317 LLLGAGK|AE 0.062 . PKNH_0914500 329 DAANLLK|PV 0.070 . PKNH_0914500 334 LKPVLSK|GE 0.066 . PKNH_0914500 338 LSKGEIK|LI 0.074 . PKNH_0914500 349 TTIAEYR|KF 0.085 . PKNH_0914500 350 TIAEYRK|FI 0.107 . PKNH_0914500 360 SCSAFER|RF 0.130 . PKNH_0914500 361 CSAFERR|FE 0.160 . PKNH_0914500 364 FERRFEK|IL 0.117 . PKNH_0914500 377 SVENTIK|IL 0.063 . PKNH_0914500 380 NTIKILR|SL 0.108 . PKNH_0914500 383 KILRSLK|SK 0.184 . PKNH_0914500 385 LRSLKSK|YE 0.096 . PKNH_0914500 397 GIHITDK|AL 0.070 . PKNH_0914500 404 ALVAAAK|VS 0.066 . PKNH_0914500 408 AAKVSDR|FI 0.096 . PKNH_0914500 411 VSDRFIK|DR 0.116 . PKNH_0914500 413 DRFIKDR|YL 0.124 . PKNH_0914500 418 DRYLPDK|AI 0.074 . PKNH_0914500 425 AIDLLNK|AC 0.064 . PKNH_0914500 437 QVQLSGK|PR 0.059 . PKNH_0914500 439 QLSGKPR|II 0.177 . PKNH_0914500 446 IIDVTER|EI 0.089 . PKNH_0914500 450 TEREIER|LA 0.088 . PKNH_0914500 464 LEMDVDK|VS 0.062 . PKNH_0914500 467 DVDKVSK|RK 0.057 . PKNH_0914500 468 VDKVSKR|KY 0.174 . PKNH_0914500 469 DKVSKRK|YN 0.088 . PKNH_0914500 475 KYNNLIK|EF 0.066 . PKNH_0914500 480 IKEFENK|KD 0.055 . PKNH_0914500 481 KEFENKK|DL 0.085 . PKNH_0914500 485 NKKDLLR|TY 0.077 . PKNH_0914500 497 YVISGER|LK 0.073 . PKNH_0914500 499 ISGERLK|RK 0.062 . PKNH_0914500 500 SGERLKR|KK 0.495 . PKNH_0914500 501 GERLKRK|KE 0.092 . PKNH_0914500 502 ERLKRKK|EA 0.159 . PKNH_0914500 506 RKKEAEK|RL 0.060 . PKNH_0914500 507 KKEAEKR|LN 0.184 . PKNH_0914500 512 KRLNELK|EL 0.066 . PKNH_0914500 523 NYISANK|EP 0.055 . PKNH_0914500 534 ELQNSLK|DA 0.086 . PKNH_0914500 539 LKDAQEK|YM 0.076 . PKNH_0914500 545 KYMEVYK|ET 0.065 . PKNH_0914500 554 LAYVEAK|TH 0.072 . PKNH_0914500 575 VSYIYLR|DS 0.146 . PKNH_0914500 590 LSFESSK|GA 0.070 . PKNH_0914500 594 SSKGALK|LY 0.056 . PKNH_0914500 601 LYNSLSK|SI 0.100 . PKNH_0914500 611 GNEDIIK|SL 0.095 . PKNH_0914500 619 LSDAVVK|AA 0.070 . PKNH_0914500 625 KAATGMK|DP 0.080 . PKNH_0914500 629 GMKDPEK|PI 0.083 . PKNH_0914500 644 GPTGVGK|TE 0.060 . PKNH_0914500 649 GKTELAK|TL 0.068 . PKNH_0914500 659 IELFSSK|DN 0.065 . PKNH_0914500 664 SKDNLIR|VN 0.085 . PKNH_0914500 678 EAHSVSK|IT 0.072 . PKNH_0914500 700 QLTEAVR|ER 0.069 . PKNH_0914500 702 TEAVRER|PH 0.141 . PKNH_0914500 714 LFDELEK|AH 0.058 . PKNH_0914500 721 AHPDVFK|VL 0.074 . PKNH_0914500 737 YINDNHR|RN 0.083 . PKNH_0914500 738 INDNHRR|NI 0.184 . PKNH_0914500 759 LGAELFK|KK 0.055 . PKNH_0914500 760 GAELFKK|KL 0.087 . PKNH_0914500 761 AELFKKK|LF 0.109 . PKNH_0914500 775 SDTPEYK|RV 0.082 . PKNH_0914500 776 DTPEYKR|VF 0.139 . PKNH_0914500 782 RVFDDLR|IQ 0.067 . PKNH_0914500 787 LRIQLIK|KC 0.068 . PKNH_0914500 788 RIQLIKK|CK 0.083 . PKNH_0914500 790 QLIKKCK|KV 0.090 . PKNH_0914500 791 LIKKCKK|VF 0.092 . PKNH_0914500 794 KCKKVFK|PE 0.070 . PKNH_0914500 800 KPEFVNR|ID 0.119 . PKNH_0914500 803 FVNRIDK|IG 0.097 . PKNH_0914500 812 IFEPLSK|KN 0.057 . PKNH_0914500 813 FEPLSKK|NL 0.080 . PKNH_0914500 816 LSKKNLR|EI 0.098 . PKNH_0914500 820 NLREIVK|LR 0.062 . PKNH_0914500 822 REIVKLR|FK 0.093 . PKNH_0914500 824 IVKLRFK|KL 0.063 . PKNH_0914500 825 VKLRFKK|LE 0.187 . PKNH_0914500 828 RFKKLEK|RL 0.062 . PKNH_0914500 829 FKKLEKR|LE 0.165 . PKNH_0914500 833 EKRLEEK|NI 0.070 . PKNH_0914500 842 HVSVSEK|AV 0.128 . PKNH_0914500 859 DPELGAR|PT 0.086 . PKNH_0914500 872 ESVIMTK|FA 0.073 . PKNH_0914500 879 FAIMYLK|KE 0.056 . PKNH_0914500 880 AIMYLKK|EL 0.097 . PKNH_0914500 894 VHVDFNK|AA 0.067 . ____________________________^_________________
  • Fasta :-

    >PKNH_0914500 ATGATGAGGCGCGCGTTCATTTGGTTTATCTATTTGATAAGTTTGTTTTTTCTGTGGAAG AATGAATTGGCTTCATGTTCTGCAAACAACAACCAAGGGAAGGAGAACTACCTGAACAGA ACGATTAACATTTTAAACGCGGGAAAAAATATAGCCAAGCGATATGGACACAGTCAGTTG AAGCCCGTGCACATTCTGAGCGCCCTGGCGAAGAGCGACTACGGCTCCAATCTTCTGAAA GAAAATAGCGTCAATGCAAGCAACTTAAAGCAGTACTTAGACACCGCTCTGGAGCAAACC CGGGCTGGACCGCCATTGGACAACAAGAGCAAGATCGCCTATTCGGACCAAGTGAAGGAA GTATTAGCCGAGGCAGAGGCATTGGCGAACAAATACAAGAGCCAGAAGGTAGACGTGGAG CACCTTCTGAGTGGATTAATGAATGATGAGCTCGTAAACGAAATTCTGAACGAAGTATAT CTGACGGACGAAGCGGTGAAGGGGATCTTGAAGAGTAAGTTGGAAAAGACGAAGAAAGAT AAGGATGGAAAATCTGGAGGTTTGTATTTAGAACAATTTGGATCCAATTTAAATGAAAAA GTTAGAAATGGAAAGTTACAAGGAATTTACGGAAGAGATGAAGAAATCAGAGCAGTTATT GAGTCTCTATTAAGATACAACAAGAACAGTCCAGTATTGGTTGGACAACCTGGTACCGGT AAGACAACCATTGTAGAAGGATTAGTTTATAGAATAGAGAAGGGAGATGTTCCAAAGGAA CTGAGGGGATATACAGTCATCAGCTTAAATTTTAGAAAGTTCACTTCAGGAACTTCCTAC AGAGGAGAATTTGAAACAAGAATGAAAAATATTATTAAGGAACTGAAAAATAAAAAAAAT AAAATCATCCTCTTTGTTGATGAAATCCATCTATTGCTTGGAGCTGGAAAAGCGGAAGGA GGAACTGACGCAGCTAACTTATTGAAGCCTGTCCTCTCCAAAGGAGAAATAAAATTAATA GGAGCTACCACCATAGCAGAGTATAGGAAATTTATAGAAAGTTGTTCTGCTTTTGAAAGA AGATTTGAAAAAATTCTAGTAGAACCCCCATCAGTGGAAAATACCATTAAGATATTAAGA TCATTGAAGAGCAAGTATGAAAGTTTCTACGGTATACATATTACAGACAAGGCGTTAGTA GCTGCTGCAAAGGTATCTGATAGATTTATAAAGGATCGTTACCTACCCGATAAAGCTATA GATCTGTTGAACAAAGCTTGCTCCTTCTTACAAGTGCAGTTATCTGGAAAGCCCCGTATC ATTGATGTTACTGAGAGAGAAATTGAACGATTAGCCTATGAAATTAGTACGCTAGAAATG GATGTCGATAAGGTTTCCAAAAGGAAGTACAACAATCTGATTAAAGAATTTGAAAATAAA AAGGATCTATTAAGAACGTATTACGAGGAGTACGTGATTTCCGGAGAAAGACTTAAGAGA AAAAAAGAAGCGGAAAAACGATTAAATGAATTGAAGGAACTAGCACAGAATTATATTAGT GCGAATAAAGAACCTCCCATTGAATTACAAAATAGTTTGAAGGATGCTCAAGAAAAGTAC ATGGAAGTGTATAAAGAAACACTAGCTTATGTAGAAGCGAAAACACATAACGCTATGAAT GTAGATGCAGTATACCAGGAGCATGTTTCGTACATTTATTTGAGAGATTCTGGTATGCCA TTAGGTTCTCTCTCTTTCGAATCATCCAAAGGGGCCCTCAAACTCTACAATAGTTTATCC AAATCTATAATTGGAAATGAAGATATTATAAAATCCCTGAGTGATGCAGTCGTTAAAGCA GCAACAGGTATGAAGGATCCTGAGAAACCCATTGGAACCTTCTTATTCTTGGGGCCTACA GGTGTGGGTAAAACTGAGCTAGCGAAAACCTTAGCCATAGAACTGTTCAGCTCCAAGGAT AACTTAATCAGAGTTAATATGTCAGAATTTACGGAAGCGCACTCAGTGTCAAAGATTACC GGTAGTCCACCAGGTTACGTAGGATTCAGTGACTCTGGTCAACTAACCGAAGCAGTGAGA GAGAGACCTCATTCCGTTGTTCTTTTCGATGAGTTAGAAAAGGCCCATCCAGATGTATTT AAAGTATTGCTACAGATTTTAGGAGATGGATATATTAACGACAATCACAGAAGGAACATT GATTTTTCCAACACCATCATTATCATGACATCCAATCTGGGTGCAGAACTATTTAAGAAG AAATTATTTTTCGATGCGAATAATTCAGATACTCCAGAGTATAAGAGAGTTTTTGATGAT CTGAGAATTCAGCTCATTAAAAAATGTAAAAAAGTTTTTAAGCCAGAATTCGTAAACAGA ATTGATAAAATAGGAATTTTCGAACCTTTGAGCAAGAAAAACCTTCGTGAAATTGTAAAG TTGAGATTTAAAAAATTGGAGAAACGTTTAGAGGAAAAGAATATTCATGTGTCCGTATCG GAGAAAGCTGTAGATTACATCATTGATCAGTCATACGATCCTGAGTTAGGAGCCAGACCA ACTCTCATTTTCATTGAAAGTGTTATCATGACAAAATTTGCCATTATGTATTTGAAAAAG GAATTGGTGGATGATATGGATGTGCATGTCGATTTTAACAAGGCCGCCAATAATTTAGTT ATCAATCTCACCGCGGTGTAA
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  • Fasta :-

    MMRRAFIWFIYLISLFFLWKNELASCSANNNQGKENYLNRTINILNAGKNIAKRYGHSQL KPVHILSALAKSDYGSNLLKENSVNASNLKQYLDTALEQTRAGPPLDNKSKIAYSDQVKE VLAEAEALANKYKSQKVDVEHLLSGLMNDELVNEILNEVYLTDEAVKGILKSKLEKTKKD KDGKSGGLYLEQFGSNLNEKVRNGKLQGIYGRDEEIRAVIESLLRYNKNSPVLVGQPGTG KTTIVEGLVYRIEKGDVPKELRGYTVISLNFRKFTSGTSYRGEFETRMKNIIKELKNKKN KIILFVDEIHLLLGAGKAEGGTDAANLLKPVLSKGEIKLIGATTIAEYRKFIESCSAFER RFEKILVEPPSVENTIKILRSLKSKYESFYGIHITDKALVAAAKVSDRFIKDRYLPDKAI DLLNKACSFLQVQLSGKPRIIDVTEREIERLAYEISTLEMDVDKVSKRKYNNLIKEFENK KDLLRTYYEEYVISGERLKRKKEAEKRLNELKELAQNYISANKEPPIELQNSLKDAQEKY MEVYKETLAYVEAKTHNAMNVDAVYQEHVSYIYLRDSGMPLGSLSFESSKGALKLYNSLS KSIIGNEDIIKSLSDAVVKAATGMKDPEKPIGTFLFLGPTGVGKTELAKTLAIELFSSKD NLIRVNMSEFTEAHSVSKITGSPPGYVGFSDSGQLTEAVRERPHSVVLFDELEKAHPDVF KVLLQILGDGYINDNHRRNIDFSNTIIIMTSNLGAELFKKKLFFDANNSDTPEYKRVFDD LRIQLIKKCKKVFKPEFVNRIDKIGIFEPLSKKNLREIVKLRFKKLEKRLEEKNIHVSVS EKAVDYIIDQSYDPELGARPTLIFIESVIMTKFAIMYLKKELVDDMDVHVDFNKAANNLV INLTAV

  • title: ATP binding site
  • coordinates: Q236,P237,G238,T239,G240,K241,T242,T243,D307,T344
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PKNH_0914500371 SVEPPSVENT0.991unspPKNH_0914500371 SVEPPSVENT0.991unspPKNH_0914500371 SVEPPSVENT0.991unspPKNH_0914500384 SRSLKSKYES0.992unspPKNH_0914500532 SELQNSLKDA0.997unspPKNH_0914500657 SIELFSSKDN0.996unspPKNH_0914500705 SERPHSVVLF0.994unspPKNH_0914500811 SFEPLSKKNL0.994unspPKNH_0914500840 SHVSVSEKAV0.991unspPKNH_0914500134 SNKYKSQKVD0.995unspPKNH_0914500279 STSGTSYRGE0.992unsp

PK11_1350c      PKH_091420      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India