PKNH_0914800 | ubiquitin carboxyl-terminal hydrolase UCH54, putative

_IDPredictionOTHERSPmTPCS_Position
PKNH_0914800OTHER0.9999460.0000410.000013
No Results

  • Fasta :-

    >PKNH_0914800 MQRSSNDSLSEWCLIESNPCIFNDMLSRMGAKNLSVEDVYDLDFFDDYICNRDVVTVENV LSVDEYRSEKEKKVKEEWAMPPMEEGNAVEGTTGEMSSHKEGAQKGLYSSTVGTDVKYNK LIKNENNIYGIIFLFNIDKNYNRNKFVEHSVPDDLFFAKQVIPNACATQAILSIVLNKEV ELNEEIKNIKSFSNSFDSSMKGLTLSNCNFLRNIHNSYKPPIYIEKENLHDEKGKMNDSF HFVSYIQFGGSVYMLDGLQEGPVLVGQMNGANENRSWIDLAKEHIKKEITDICNASAKGE GGEGGDGRFNILAVVKDKEHIINEFCNIHRIVKKRVNIKLSTLGKEDVDLNDNINEEDFN YPSIPTIEELPDDISELLLIAQKSTGEINFLHSLLQEQIQLKLSWNKELTFKFFNFYPFV MSSLNLMAKHNILKEAYEKQMQKQKHSRGSA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_0914800.fa Sequence name : PKNH_0914800 Sequence length : 451 VALUES OF COMPUTED PARAMETERS Coef20 : 3.963 CoefTot : 0.070 ChDiff : -18 ZoneTo : 6 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.229 1.400 0.114 0.511 MesoH : -0.770 0.101 -0.550 0.193 MuHd_075 : 34.830 22.539 11.095 5.780 MuHd_095 : 30.689 11.049 6.982 4.791 MuHd_100 : 24.098 8.893 4.260 4.957 MuHd_105 : 19.189 6.659 1.610 4.534 Hmax_075 : 15.517 14.467 2.467 4.527 Hmax_095 : 3.238 1.225 -0.969 1.570 Hmax_100 : 4.200 4.200 -1.825 2.850 Hmax_105 : 8.300 4.200 -1.197 2.740 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6663 0.3337 DFMC : 0.6401 0.3599
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 451 PKNH_0914800 MQRSSNDSLSEWCLIESNPCIFNDMLSRMGAKNLSVEDVYDLDFFDDYICNRDVVTVENVLSVDEYRSEKEKKVKEEWAM 80 PPMEEGNAVEGTTGEMSSHKEGAQKGLYSSTVGTDVKYNKLIKNENNIYGIIFLFNIDKNYNRNKFVEHSVPDDLFFAKQ 160 VIPNACATQAILSIVLNKEVELNEEIKNIKSFSNSFDSSMKGLTLSNCNFLRNIHNSYKPPIYIEKENLHDEKGKMNDSF 240 HFVSYIQFGGSVYMLDGLQEGPVLVGQMNGANENRSWIDLAKEHIKKEITDICNASAKGEGGEGGDGRFNILAVVKDKEH 320 IINEFCNIHRIVKKRVNIKLSTLGKEDVDLNDNINEEDFNYPSIPTIEELPDDISELLLIAQKSTGEINFLHSLLQEQIQ 400 LKLSWNKELTFKFFNFYPFVMSSLNLMAKHNILKEAYEKQMQKQKHSRGSA 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_0914800 3 ----MQR|SS 0.157 . PKNH_0914800 28 FNDMLSR|MG 0.081 . PKNH_0914800 32 LSRMGAK|NL 0.072 . PKNH_0914800 52 DDYICNR|DV 0.161 . PKNH_0914800 67 LSVDEYR|SE 0.107 . PKNH_0914800 70 DEYRSEK|EK 0.117 . PKNH_0914800 72 YRSEKEK|KV 0.106 . PKNH_0914800 73 RSEKEKK|VK 0.113 . PKNH_0914800 75 EKEKKVK|EE 0.077 . PKNH_0914800 100 GEMSSHK|EG 0.069 . PKNH_0914800 105 HKEGAQK|GL 0.073 . PKNH_0914800 117 TVGTDVK|YN 0.061 . PKNH_0914800 120 TDVKYNK|LI 0.066 . PKNH_0914800 123 KYNKLIK|NE 0.062 . PKNH_0914800 139 FLFNIDK|NY 0.059 . PKNH_0914800 143 IDKNYNR|NK 0.079 . PKNH_0914800 145 KNYNRNK|FV 0.132 . PKNH_0914800 159 DDLFFAK|QV 0.083 . PKNH_0914800 178 LSIVLNK|EV 0.090 . PKNH_0914800 187 ELNEEIK|NI 0.065 . PKNH_0914800 190 EEIKNIK|SF 0.088 . PKNH_0914800 201 SFDSSMK|GL 0.064 . PKNH_0914800 212 SNCNFLR|NI 0.116 . PKNH_0914800 219 NIHNSYK|PP 0.070 . PKNH_0914800 226 PPIYIEK|EN 0.064 . PKNH_0914800 233 ENLHDEK|GK 0.063 . PKNH_0914800 235 LHDEKGK|MN 0.074 . PKNH_0914800 275 NGANENR|SW 0.155 . PKNH_0914800 282 SWIDLAK|EH 0.076 . PKNH_0914800 286 LAKEHIK|KE 0.062 . PKNH_0914800 287 AKEHIKK|EI 0.126 . PKNH_0914800 298 ICNASAK|GE 0.099 . PKNH_0914800 308 GEGGDGR|FN 0.094 . PKNH_0914800 316 NILAVVK|DK 0.082 . PKNH_0914800 318 LAVVKDK|EH 0.069 . PKNH_0914800 330 EFCNIHR|IV 0.099 . PKNH_0914800 333 NIHRIVK|KR 0.089 . PKNH_0914800 334 IHRIVKK|RV 0.190 . PKNH_0914800 335 HRIVKKR|VN 0.243 . PKNH_0914800 339 KKRVNIK|LS 0.066 . PKNH_0914800 345 KLSTLGK|ED 0.065 . PKNH_0914800 383 LLLIAQK|ST 0.088 . PKNH_0914800 402 QEQIQLK|LS 0.068 . PKNH_0914800 407 LKLSWNK|EL 0.064 . PKNH_0914800 412 NKELTFK|FF 0.067 . PKNH_0914800 429 SLNLMAK|HN 0.077 . PKNH_0914800 434 AKHNILK|EA 0.079 . PKNH_0914800 439 LKEAYEK|QM 0.065 . PKNH_0914800 443 YEKQMQK|QK 0.063 . PKNH_0914800 445 KQMQKQK|HS 0.071 . PKNH_0914800 448 QKQKHSR|GS 0.123 . ____________________________^_________________

  • Fasta :-

    >PKNH_0914800 ATGCAGAGAAGCAGTAACGACAGCTTGAGTGAATGGTGCCTAATCGAGAGCAACCCATGC ATTTTCAATGATATGTTAAGTCGGATGGGGGCGAAGAACCTCTCCGTGGAAGATGTGTAC GATCTAGATTTTTTCGATGATTACATTTGTAATAGGGATGTGGTAACTGTAGAAAATGTT CTGAGTGTGGATGAGTATCGAAGTGAGAAGGAGAAGAAGGTGAAGGAGGAGTGGGCCATG CCTCCCATGGAGGAGGGCAACGCGGTTGAAGGTACCACTGGGGAAATGTCTTCTCATAAG GAAGGCGCACAAAAGGGATTGTACAGCAGTACCGTAGGGACAGATGTAAAATACAACAAA CTAATAAAAAACGAGAACAATATTTATGGGATAATTTTTCTTTTTAACATCGATAAGAAT TACAATAGGAATAAATTTGTCGAGCACAGTGTACCGGATGATCTTTTTTTTGCAAAACAG GTGATTCCAAATGCATGTGCCACACAAGCCATCCTATCCATTGTCCTTAACAAGGAGGTG GAGCTGAATGAAGAAATAAAAAATATAAAATCCTTTAGCAACAGCTTTGATAGCTCCATG AAGGGACTCACTCTTTCGAACTGTAACTTCCTTCGTAACATACACAATTCGTACAAACCT CCCATATATATAGAGAAGGAGAACCTGCACGATGAGAAGGGAAAAATGAATGATTCTTTC CACTTCGTTTCGTACATACAGTTTGGTGGAAGTGTGTACATGCTCGATGGGCTACAGGAG GGGCCCGTTTTAGTTGGACAGATGAATGGCGCAAACGAGAATCGTAGTTGGATTGATCTC GCCAAAGAACACATAAAGAAAGAAATCACCGACATATGCAACGCTAGTGCTAAGGGAGAA GGTGGTGAAGGAGGAGATGGACGATTCAACATTCTGGCTGTAGTAAAAGACAAGGAACAT ATTATTAATGAATTTTGTAACATACATAGAATTGTAAAAAAGAGAGTAAACATTAAGTTA AGTACCTTGGGAAAGGAAGATGTCGATTTAAACGACAATATAAATGAAGAAGATTTTAAC TACCCTAGCATACCAACCATAGAGGAACTCCCAGATGATATTTCAGAACTACTTCTTATT GCTCAAAAATCAACCGGAGAAATTAACTTCCTCCACTCACTTTTGCAGGAACAAATACAG TTGAAACTATCCTGGAACAAGGAACTCACTTTCAAATTTTTCAATTTCTACCCTTTTGTC ATGTCCTCCTTGAATCTCATGGCGAAGCATAACATTTTGAAGGAGGCCTACGAGAAACAG ATGCAGAAACAGAAGCATAGTCGGGGCTCCGCGTAG
  • Download Fasta

  • Fasta :-

    MQRSSNDSLSEWCLIESNPCIFNDMLSRMGAKNLSVEDVYDLDFFDDYICNRDVVTVENV LSVDEYRSEKEKKVKEEWAMPPMEEGNAVEGTTGEMSSHKEGAQKGLYSSTVGTDVKYNK LIKNENNIYGIIFLFNIDKNYNRNKFVEHSVPDDLFFAKQVIPNACATQAILSIVLNKEV ELNEEIKNIKSFSNSFDSSMKGLTLSNCNFLRNIHNSYKPPIYIEKENLHDEKGKMNDSF HFVSYIQFGGSVYMLDGLQEGPVLVGQMNGANENRSWIDLAKEHIKKEITDICNASAKGE GGEGGDGRFNILAVVKDKEHIINEFCNIHRIVKKRVNIKLSTLGKEDVDLNDNINEEDFN YPSIPTIEELPDDISELLLIAQKSTGEINFLHSLLQEQIQLKLSWNKELTFKFFNFYPFV MSSLNLMAKHNILKEAYEKQMQKQKHSRGSA

  • title: catalytic site
  • coordinates: Q160,C166,H241,D256
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PKNH_091480068 SDEYRSEKEK0.997unspPKNH_091480068 SDEYRSEKEK0.997unspPKNH_091480068 SDEYRSEKEK0.997unspPKNH_091480098 SGEMSSHKEG0.997unspPKNH_0914800276 SNENRSWIDL0.996unspPKNH_09148008 SSSNDSLSEW0.996unspPKNH_091480035 SAKNLSVEDV0.995unsp

PK11_1380w      PKH_091450      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India