PKNH_0917300 | ATP-dependent zinc metalloprotease FTSH, putative

_IDPredictionOTHERSPmTPCS_Position
PKNH_0917300OTHER0.9863900.0002630.013347
No Results

  • Fasta :-

    >PKNH_0917300 MSRSQIFLKSTRDIYNNGMMGRAGPVEQFLSCRKYLGMLLNVPPHIGGSMEVSASEIGMF SGNRRGVRRWLHVLKRYMKICCREGVLKKEELPKLHETARRLLQTKGRGAVFPQEGKAPD EHLTKEDVPLAYHNEGNFPGGDWRKGKSWQNPFLAQSEFFNPRKYEKVAIGLQENRRKFH QMVQMYLSKAPKGFENFERTNKKKEEGSPSSNSFKPDEEKNNKKFDNFFFFFFFMLLLFF FLFVDSNGLYNEVTQNDFFMNYLSKGYVEKIKLVNKDYVKAYLNVHGMSKYHQKYVSFRI GNSDAFERKVEHIQREMNIQREEIIEVQYTNETNMLSEVKGYIPTILFFLLFAFIFQKIT LKNVANSGMDRLFKMNKMNPINKHQLKTDVKFSNVAGMKQAKEEIMEFVDFLRAPSKYEN LGAKMPKGALLCGAPGTGKTLLAKAVAGEANVPFFNISGSDFIEVFVGIGPSRVRELFAQ ARKHAPSIIFIDEIDAVGRKRSKGGFAGGGNDERENTLNQMLVEMDGFHTSNDKVVVLAG TNRVDILDPAITRPGRFDRIVHISKPDINERSEIFQVHLKNLKLHHTLDIENISYLLASL TPGFVGADIANVVNEGAIQCARRSNMVGVQVKDFELAIERVIGGLPKSSSLISPLEKKII SYHETGHALIGWLLEHADPVLKVSILPRSNGALGYSQHLSEEVMLFSRDAILDKVAVILG GRAAEELFIGKITTGAIDDLNKVTQLSYSYVSQYGMNKEIGLVSFQPNTSSEYSFYRPHS ECLAHLIDNEVRCLIETQYNRVKSILLKHEKQVHKLADLLFQKETISYQDIVECIGERPY PVKSTYEKFVKANPYKLIRPGETPSEQAIVSDGVGPDGGNGVATAGVSPNGESEKGIQGT HAMPQMGEPNEASAEPLVKREERHITGKKETSEENSDDGKKNNKVSHVGTTR
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_0917300.fa Sequence name : PKNH_0917300 Sequence length : 952 VALUES OF COMPUTED PARAMETERS Coef20 : 4.278 CoefTot : -2.370 ChDiff : 14 ZoneTo : 50 KR : 6 DE : 2 CleavSite : 24 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 3.406 3.065 0.473 1.138 MesoH : -0.444 0.473 -0.319 0.270 MuHd_075 : 50.209 21.005 11.081 9.504 MuHd_095 : 37.708 20.154 11.289 7.575 MuHd_100 : 34.947 23.216 10.437 7.145 MuHd_105 : 37.647 23.351 9.829 7.785 Hmax_075 : 13.700 7.800 0.993 4.740 Hmax_095 : 13.700 11.375 2.487 4.730 Hmax_100 : 12.000 16.400 1.593 4.210 Hmax_105 : 15.800 16.400 2.634 5.378 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8236 0.1764 DFMC : 0.7976 0.2024
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 952 PKNH_0917300 MSRSQIFLKSTRDIYNNGMMGRAGPVEQFLSCRKYLGMLLNVPPHIGGSMEVSASEIGMFSGNRRGVRRWLHVLKRYMKI 80 CCREGVLKKEELPKLHETARRLLQTKGRGAVFPQEGKAPDEHLTKEDVPLAYHNEGNFPGGDWRKGKSWQNPFLAQSEFF 160 NPRKYEKVAIGLQENRRKFHQMVQMYLSKAPKGFENFERTNKKKEEGSPSSNSFKPDEEKNNKKFDNFFFFFFFMLLLFF 240 FLFVDSNGLYNEVTQNDFFMNYLSKGYVEKIKLVNKDYVKAYLNVHGMSKYHQKYVSFRIGNSDAFERKVEHIQREMNIQ 320 REEIIEVQYTNETNMLSEVKGYIPTILFFLLFAFIFQKITLKNVANSGMDRLFKMNKMNPINKHQLKTDVKFSNVAGMKQ 400 AKEEIMEFVDFLRAPSKYENLGAKMPKGALLCGAPGTGKTLLAKAVAGEANVPFFNISGSDFIEVFVGIGPSRVRELFAQ 480 ARKHAPSIIFIDEIDAVGRKRSKGGFAGGGNDERENTLNQMLVEMDGFHTSNDKVVVLAGTNRVDILDPAITRPGRFDRI 560 VHISKPDINERSEIFQVHLKNLKLHHTLDIENISYLLASLTPGFVGADIANVVNEGAIQCARRSNMVGVQVKDFELAIER 640 VIGGLPKSSSLISPLEKKIISYHETGHALIGWLLEHADPVLKVSILPRSNGALGYSQHLSEEVMLFSRDAILDKVAVILG 720 GRAAEELFIGKITTGAIDDLNKVTQLSYSYVSQYGMNKEIGLVSFQPNTSSEYSFYRPHSECLAHLIDNEVRCLIETQYN 800 RVKSILLKHEKQVHKLADLLFQKETISYQDIVECIGERPYPVKSTYEKFVKANPYKLIRPGETPSEQAIVSDGVGPDGGN 880 GVATAGVSPNGESEKGIQGTHAMPQMGEPNEASAEPLVKREERHITGKKETSEENSDDGKKNNKVSHVGTTR 960 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ..............................................................................P. 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ........................................................................ 960 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PKNH_0917300 3 ----MSR|SQ 0.102 . PKNH_0917300 9 RSQIFLK|ST 0.111 . PKNH_0917300 12 IFLKSTR|DI 0.121 . PKNH_0917300 22 NNGMMGR|AG 0.091 . PKNH_0917300 33 EQFLSCR|KY 0.081 . PKNH_0917300 34 QFLSCRK|YL 0.087 . PKNH_0917300 64 GMFSGNR|RG 0.061 . PKNH_0917300 65 MFSGNRR|GV 0.339 . PKNH_0917300 68 GNRRGVR|RW 0.269 . PKNH_0917300 69 NRRGVRR|WL 0.247 . PKNH_0917300 75 RWLHVLK|RY 0.063 . PKNH_0917300 76 WLHVLKR|YM 0.193 . PKNH_0917300 79 VLKRYMK|IC 0.111 . PKNH_0917300 83 YMKICCR|EG 0.065 . PKNH_0917300 88 CREGVLK|KE 0.059 . PKNH_0917300 89 REGVLKK|EE 0.099 . PKNH_0917300 94 KKEELPK|LH 0.071 . PKNH_0917300 100 KLHETAR|RL 0.091 . PKNH_0917300 101 LHETARR|LL 0.149 . PKNH_0917300 106 RRLLQTK|GR 0.095 . PKNH_0917300 108 LLQTKGR|GA 0.114 . PKNH_0917300 117 VFPQEGK|AP 0.059 . PKNH_0917300 125 PDEHLTK|ED 0.056 . PKNH_0917300 144 FPGGDWR|KG 0.076 . PKNH_0917300 145 PGGDWRK|GK 0.105 . PKNH_0917300 147 GDWRKGK|SW 0.287 . PKNH_0917300 163 SEFFNPR|KY 0.113 . PKNH_0917300 164 EFFNPRK|YE 0.082 . PKNH_0917300 167 NPRKYEK|VA 0.074 . PKNH_0917300 176 IGLQENR|RK 0.080 . PKNH_0917300 177 GLQENRR|KF 0.167 . PKNH_0917300 178 LQENRRK|FH 0.099 . PKNH_0917300 189 VQMYLSK|AP 0.062 . PKNH_0917300 192 YLSKAPK|GF 0.092 . PKNH_0917300 199 GFENFER|TN 0.127 . PKNH_0917300 202 NFERTNK|KK 0.116 . PKNH_0917300 203 FERTNKK|KE 0.107 . PKNH_0917300 204 ERTNKKK|EE 0.104 . PKNH_0917300 215 PSSNSFK|PD 0.081 . PKNH_0917300 220 FKPDEEK|NN 0.058 . PKNH_0917300 223 DEEKNNK|KF 0.059 . PKNH_0917300 224 EEKNNKK|FD 0.100 . PKNH_0917300 265 FMNYLSK|GY 0.068 . PKNH_0917300 270 SKGYVEK|IK 0.064 . PKNH_0917300 272 GYVEKIK|LV 0.071 . PKNH_0917300 276 KIKLVNK|DY 0.071 . PKNH_0917300 280 VNKDYVK|AY 0.060 . PKNH_0917300 290 NVHGMSK|YH 0.063 . PKNH_0917300 294 MSKYHQK|YV 0.127 . PKNH_0917300 299 QKYVSFR|IG 0.084 . PKNH_0917300 308 NSDAFER|KV 0.164 . PKNH_0917300 309 SDAFERK|VE 0.104 . PKNH_0917300 315 KVEHIQR|EM 0.092 . PKNH_0917300 321 REMNIQR|EE 0.082 . PKNH_0917300 340 NMLSEVK|GY 0.062 . PKNH_0917300 358 FAFIFQK|IT 0.061 . PKNH_0917300 362 FQKITLK|NV 0.070 . PKNH_0917300 371 ANSGMDR|LF 0.086 . PKNH_0917300 374 GMDRLFK|MN 0.110 . PKNH_0917300 377 RLFKMNK|MN 0.067 . PKNH_0917300 383 KMNPINK|HQ 0.060 . PKNH_0917300 387 INKHQLK|TD 0.061 . PKNH_0917300 391 QLKTDVK|FS 0.071 . PKNH_0917300 399 SNVAGMK|QA 0.076 . PKNH_0917300 402 AGMKQAK|EE 0.070 . PKNH_0917300 413 EFVDFLR|AP 0.096 . PKNH_0917300 417 FLRAPSK|YE 0.071 . PKNH_0917300 424 YENLGAK|MP 0.068 . PKNH_0917300 427 LGAKMPK|GA 0.075 . PKNH_0917300 439 GAPGTGK|TL 0.057 . PKNH_0917300 444 GKTLLAK|AV 0.078 . PKNH_0917300 473 VGIGPSR|VR 0.069 . PKNH_0917300 475 IGPSRVR|EL 0.085 . PKNH_0917300 482 ELFAQAR|KH 0.087 . PKNH_0917300 483 LFAQARK|HA 0.087 . PKNH_0917300 499 EIDAVGR|KR 0.101 . PKNH_0917300 500 IDAVGRK|RS 0.083 . PKNH_0917300 501 DAVGRKR|SK 0.322 . PKNH_0917300 503 VGRKRSK|GG 0.075 . PKNH_0917300 514 GGGNDER|EN 0.077 . PKNH_0917300 534 FHTSNDK|VV 0.060 . PKNH_0917300 543 VLAGTNR|VD 0.069 . PKNH_0917300 553 LDPAITR|PG 0.066 . PKNH_0917300 556 AITRPGR|FD 0.234 . PKNH_0917300 559 RPGRFDR|IV 0.638 *ProP* PKNH_0917300 565 RIVHISK|PD 0.061 . PKNH_0917300 571 KPDINER|SE 0.122 . PKNH_0917300 580 IFQVHLK|NL 0.057 . PKNH_0917300 583 VHLKNLK|LH 0.054 . PKNH_0917300 622 GAIQCAR|RS 0.093 . PKNH_0917300 623 AIQCARR|SN 0.268 . PKNH_0917300 632 MVGVQVK|DF 0.080 . PKNH_0917300 640 FELAIER|VI 0.082 . PKNH_0917300 647 VIGGLPK|SS 0.078 . PKNH_0917300 657 LISPLEK|KI 0.070 . PKNH_0917300 658 ISPLEKK|II 0.133 . PKNH_0917300 682 HADPVLK|VS 0.052 . PKNH_0917300 688 KVSILPR|SN 0.246 . PKNH_0917300 708 EVMLFSR|DA 0.091 . PKNH_0917300 714 RDAILDK|VA 0.063 . PKNH_0917300 722 AVILGGR|AA 0.086 . PKNH_0917300 731 EELFIGK|IT 0.064 . PKNH_0917300 742 AIDDLNK|VT 0.054 . PKNH_0917300 758 SQYGMNK|EI 0.071 . PKNH_0917300 777 SEYSFYR|PH 0.121 . PKNH_0917300 792 LIDNEVR|CL 0.082 . PKNH_0917300 801 IETQYNR|VK 0.080 . PKNH_0917300 803 TQYNRVK|SI 0.076 . PKNH_0917300 808 VKSILLK|HE 0.068 . PKNH_0917300 811 ILLKHEK|QV 0.080 . PKNH_0917300 815 HEKQVHK|LA 0.067 . PKNH_0917300 823 ADLLFQK|ET 0.061 . PKNH_0917300 838 VECIGER|PY 0.067 . PKNH_0917300 843 ERPYPVK|ST 0.098 . PKNH_0917300 848 VKSTYEK|FV 0.096 . PKNH_0917300 851 TYEKFVK|AN 0.064 . PKNH_0917300 856 VKANPYK|LI 0.087 . PKNH_0917300 859 NPYKLIR|PG 0.083 . PKNH_0917300 895 PNGESEK|GI 0.075 . PKNH_0917300 919 SAEPLVK|RE 0.068 . PKNH_0917300 920 AEPLVKR|EE 0.142 . PKNH_0917300 923 LVKREER|HI 0.350 . PKNH_0917300 928 ERHITGK|KE 0.075 . PKNH_0917300 929 RHITGKK|ET 0.103 . PKNH_0917300 940 ENSDDGK|KN 0.070 . PKNH_0917300 941 NSDDGKK|NN 0.080 . PKNH_0917300 944 DGKKNNK|VS 0.062 . PKNH_0917300 952 SHVGTTR|-- 0.089 . ____________________________^_________________

  • Fasta :-

    >PKNH_0917300 ATGAGCAGATCACAGATTTTTCTGAAAAGTACGAGGGATATTTACAACAATGGGATGATG GGTCGTGCGGGCCCAGTGGAACAATTCCTATCGTGCAGGAAGTACCTGGGGATGCTTTTA AATGTGCCCCCCCATATTGGAGGTTCCATGGAGGTAAGCGCCTCAGAAATAGGCATGTTT AGTGGTAACCGCAGAGGGGTGAGGCGTTGGCTACACGTTTTGAAGAGGTACATGAAGATC TGTTGCCGAGAGGGAGTACTGAAAAAGGAGGAGCTCCCTAAACTCCATGAAACTGCACGA CGTTTGCTTCAGACAAAGGGGAGGGGTGCGGTATTCCCGCAGGAGGGAAAAGCCCCCGAT GAGCATTTGACAAAGGAAGATGTACCCCTAGCATACCATAACGAAGGGAATTTTCCCGGT GGAGATTGGCGGAAGGGGAAGAGTTGGCAGAACCCCTTCCTTGCGCAGAGTGAATTTTTT AACCCTCGAAAATATGAAAAAGTAGCAATCGGTCTGCAAGAAAACAGAAGAAAGTTCCAC CAGATGGTTCAAATGTACCTGTCTAAGGCACCTAAAGGATTCGAAAATTTTGAAAGGACA AATAAAAAGAAGGAGGAAGGGAGTCCATCGTCCAATTCGTTCAAACCAGATGAAGAGAAA AACAATAAAAAGTTCGACAACTTTTTCTTTTTCTTTTTCTTCATGCTACTTTTATTCTTT TTCCTCTTCGTCGATTCGAATGGGTTATACAACGAAGTAACACAAAATGACTTTTTCATG AATTACTTATCCAAGGGATATGTGGAGAAAATTAAGCTAGTTAATAAAGATTACGTGAAA GCATACCTGAACGTTCATGGAATGAGTAAGTATCACCAAAAGTATGTGAGCTTCCGAATA GGGAATAGTGACGCATTCGAACGGAAGGTGGAACATATCCAAAGGGAAATGAATATACAA AGAGAGGAAATAATAGAAGTTCAATATACAAATGAAACGAACATGTTAAGTGAAGTCAAA GGCTACATCCCAACTATACTTTTTTTCTTGCTGTTCGCCTTCATATTCCAAAAAATAACA TTAAAAAATGTAGCGAACAGTGGCATGGATAGATTATTTAAAATGAATAAAATGAATCCA ATTAACAAGCATCAGTTAAAAACAGATGTGAAATTTTCAAATGTTGCAGGAATGAAACAA GCGAAAGAAGAAATAATGGAATTTGTTGATTTTTTGAGAGCCCCGTCAAAATATGAAAAC CTAGGGGCAAAGATGCCGAAAGGGGCTCTGCTATGTGGTGCCCCTGGTACAGGAAAGACA TTACTAGCCAAAGCTGTAGCAGGAGAAGCCAATGTGCCTTTTTTTAATATAAGTGGTAGT GATTTTATCGAAGTTTTTGTTGGTATTGGACCATCGAGAGTTAGAGAATTATTTGCTCAA GCGAGAAAACATGCACCATCCATAATATTTATTGATGAAATAGATGCAGTGGGTAGGAAG AGATCCAAGGGTGGTTTCGCAGGTGGAGGAAATGATGAAAGAGAAAACACACTAAATCAA ATGTTGGTAGAAATGGACGGTTTTCATACATCTAATGATAAAGTAGTAGTCTTGGCAGGG ACGAATCGAGTGGATATTCTAGACCCAGCTATTACGCGACCAGGAAGATTCGATAGAATT GTTCACATAAGCAAGCCTGATATTAATGAACGCTCCGAGATTTTTCAAGTGCATTTAAAA AATTTAAAATTACATCATACATTAGATATAGAAAACATTAGCTACCTTTTAGCTTCTCTA ACTCCAGGTTTTGTCGGAGCAGACATTGCCAATGTCGTGAATGAAGGAGCTATCCAATGT GCAAGAAGGTCTAACATGGTTGGTGTTCAGGTGAAAGATTTCGAATTAGCAATAGAAAGA GTAATTGGTGGATTACCAAAGTCTTCTTCTCTCATTTCTCCACTAGAAAAAAAAATTATT TCCTACCACGAAACAGGTCATGCACTTATCGGGTGGCTACTTGAGCATGCTGATCCCGTT CTAAAGGTTTCTATTTTACCAAGAAGTAATGGAGCCCTCGGTTATTCACAACACCTTTCA GAAGAGGTTATGCTTTTTTCAAGAGATGCTATTTTGGATAAGGTAGCCGTTATTTTAGGA GGAAGAGCAGCTGAAGAATTATTTATCGGAAAAATCACCACCGGTGCAATAGATGATTTA AACAAAGTAACGCAATTATCCTATTCCTATGTATCTCAATACGGAATGAATAAAGAAATA GGACTTGTTTCCTTTCAGCCCAACACTTCAAGTGAATATAGCTTCTACAGACCGCACTCT GAATGCCTAGCGCATCTCATAGATAATGAAGTGCGATGTCTTATTGAGACGCAATATAAT CGAGTGAAGTCTATTTTGCTTAAGCATGAGAAACAAGTTCACAAACTAGCCGATCTACTT TTCCAGAAGGAGACCATCTCTTACCAAGACATTGTAGAATGCATCGGAGAGCGCCCTTAC CCAGTGAAGTCTACCTACGAGAAGTTCGTCAAAGCCAACCCCTACAAATTAATCCGTCCA GGTGAAACTCCAAGCGAGCAGGCAATTGTCAGTGATGGAGTCGGCCCTGACGGTGGTAAT GGTGTAGCTACTGCAGGCGTATCTCCTAATGGGGAGTCCGAGAAAGGGATACAGGGCACA CATGCTATGCCTCAGATGGGCGAACCGAATGAAGCATCGGCGGAACCCCTGGTTAAGCGA GAGGAACGGCACATCACAGGAAAGAAGGAAACCTCCGAGGAAAATTCTGACGATGGGAAA AAGAATAACAAGGTTTCTCACGTGGGCACTACACGTTGA
  • Download Fasta

  • Fasta :-

    MSRSQIFLKSTRDIYNNGMMGRAGPVEQFLSCRKYLGMLLNVPPHIGGSMEVSASEIGMF SGNRRGVRRWLHVLKRYMKICCREGVLKKEELPKLHETARRLLQTKGRGAVFPQEGKAPD EHLTKEDVPLAYHNEGNFPGGDWRKGKSWQNPFLAQSEFFNPRKYEKVAIGLQENRRKFH QMVQMYLSKAPKGFENFERTNKKKEEGSPSSNSFKPDEEKNNKKFDNFFFFFFFMLLLFF FLFVDSNGLYNEVTQNDFFMNYLSKGYVEKIKLVNKDYVKAYLNVHGMSKYHQKYVSFRI GNSDAFERKVEHIQREMNIQREEIIEVQYTNETNMLSEVKGYIPTILFFLLFAFIFQKIT LKNVANSGMDRLFKMNKMNPINKHQLKTDVKFSNVAGMKQAKEEIMEFVDFLRAPSKYEN LGAKMPKGALLCGAPGTGKTLLAKAVAGEANVPFFNISGSDFIEVFVGIGPSRVRELFAQ ARKHAPSIIFIDEIDAVGRKRSKGGFAGGGNDERENTLNQMLVEMDGFHTSNDKVVVLAG TNRVDILDPAITRPGRFDRIVHISKPDINERSEIFQVHLKNLKLHHTLDIENISYLLASL TPGFVGADIANVVNEGAIQCARRSNMVGVQVKDFELAIERVIGGLPKSSSLISPLEKKII SYHETGHALIGWLLEHADPVLKVSILPRSNGALGYSQHLSEEVMLFSRDAILDKVAVILG GRAAEELFIGKITTGAIDDLNKVTQLSYSYVSQYGMNKEIGLVSFQPNTSSEYSFYRPHS ECLAHLIDNEVRCLIETQYNRVKSILLKHEKQVHKLADLLFQKETISYQDIVECIGERPY PVKSTYEKFVKANPYKLIRPGETPSEQAIVSDGVGPDGGNGVATAGVSPNGESEKGIQGT HAMPQMGEPNEASAEPLVKREERHITGKKETSEENSDDGKKNNKVSHVGTTR

  • title: ATP binding site
  • coordinates: A434,P435,G436,T437,G438,K439,T440,L441,D492,N542
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PKNH_0917300416 SLRAPSKYEN0.996unspPKNH_0917300416 SLRAPSKYEN0.996unspPKNH_0917300416 SLRAPSKYEN0.996unspPKNH_0917300653 SSSLISPLEK0.991unspPKNH_0917300932 SKKETSEENS0.997unspPKNH_0917300208 SKEEGSPSSN0.991unspPKNH_0917300367 SNVANSGMDR0.99unsp

PK11_1620c      PKH_091700      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India