PKNH_0926800 | GPI-anchor transamidase, putative

_IDPredictionOTHERSPmTPCS_Position
PKNH_0926800SP0.0284310.9701930.001375CS pos: 18-19. KHA-VA. Pr: 0.3200
No Results

  • Fasta :-

    >PKNH_0926800 MELWKVFVYCVLVAIKHAVAPSVYFSGLDIKNMKGKYKEIEEGHAKQNVNDIFLHELKKS NYQLNNNIIALSTSRHYFNYRHTSNLLTAYKYLKNAGDNMDRNILLMVPFDQACNCRNMV GGTIFNEYEKPSSEDLKEKKMKENLYSHLNIDYKNDNIRDEQIRRVIRHRYDALTPVKYR LYTNGNREKNLFIYMTGHGGVSFFKIQDFNIVSSAEFSLYIQELLIKNIYKYIFVIIDTC QGYSFYDQILNFLEKNKINNVFLMSSSDKNENSYSLHSSRYLSVSTVDRFTFYFFSYLEN INRIYADEPYKNTKAFSLYNILNYLKTQHLISTPTINNFKFSVSMFMHSKNILFYDSSGF YLSKDTQEGALDGLGKSSYNAKHKTDKTATRNTCLGDLSACGHMKNEIHTHMGNLYSRSS FYNNVEVYFKEESHFTDYYFTAECFSGGYLLPSFLFLVIIALCLLFFLFT
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_0926800.fa Sequence name : PKNH_0926800 Sequence length : 470 VALUES OF COMPUTED PARAMETERS Coef20 : 4.372 CoefTot : -0.502 ChDiff : 7 ZoneTo : 28 KR : 2 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.876 3.153 0.619 1.021 MesoH : -0.056 0.436 -0.283 0.309 MuHd_075 : 15.262 15.670 6.431 4.167 MuHd_095 : 33.179 24.664 10.283 7.443 MuHd_100 : 32.765 18.634 9.212 6.382 MuHd_105 : 27.873 12.811 6.309 4.853 Hmax_075 : 13.125 20.067 4.783 6.627 Hmax_095 : 19.337 23.275 5.078 7.796 Hmax_100 : 18.100 19.500 3.236 6.870 Hmax_105 : 17.938 17.700 2.461 6.554 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9840 0.0160 DFMC : 0.9921 0.0079
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 470 PKNH_0926800 MELWKVFVYCVLVAIKHAVAPSVYFSGLDIKNMKGKYKEIEEGHAKQNVNDIFLHELKKSNYQLNNNIIALSTSRHYFNY 80 RHTSNLLTAYKYLKNAGDNMDRNILLMVPFDQACNCRNMVGGTIFNEYEKPSSEDLKEKKMKENLYSHLNIDYKNDNIRD 160 EQIRRVIRHRYDALTPVKYRLYTNGNREKNLFIYMTGHGGVSFFKIQDFNIVSSAEFSLYIQELLIKNIYKYIFVIIDTC 240 QGYSFYDQILNFLEKNKINNVFLMSSSDKNENSYSLHSSRYLSVSTVDRFTFYFFSYLENINRIYADEPYKNTKAFSLYN 320 ILNYLKTQHLISTPTINNFKFSVSMFMHSKNILFYDSSGFYLSKDTQEGALDGLGKSSYNAKHKTDKTATRNTCLGDLSA 400 CGHMKNEIHTHMGNLYSRSSFYNNVEVYFKEESHFTDYYFTAECFSGGYLLPSFLFLVIIALCLLFFLFT 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ...................................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_0926800 5 --MELWK|VF 0.055 . PKNH_0926800 16 CVLVAIK|HA 0.057 . PKNH_0926800 31 FSGLDIK|NM 0.058 . PKNH_0926800 34 LDIKNMK|GK 0.072 . PKNH_0926800 36 IKNMKGK|YK 0.126 . PKNH_0926800 38 NMKGKYK|EI 0.084 . PKNH_0926800 46 IEEGHAK|QN 0.062 . PKNH_0926800 58 IFLHELK|KS 0.059 . PKNH_0926800 59 FLHELKK|SN 0.138 . PKNH_0926800 75 IALSTSR|HY 0.093 . PKNH_0926800 81 RHYFNYR|HT 0.122 . PKNH_0926800 91 NLLTAYK|YL 0.072 . PKNH_0926800 94 TAYKYLK|NA 0.084 . PKNH_0926800 102 AGDNMDR|NI 0.071 . PKNH_0926800 117 DQACNCR|NM 0.088 . PKNH_0926800 130 IFNEYEK|PS 0.067 . PKNH_0926800 137 PSSEDLK|EK 0.073 . PKNH_0926800 139 SEDLKEK|KM 0.065 . PKNH_0926800 140 EDLKEKK|MK 0.096 . PKNH_0926800 142 LKEKKMK|EN 0.070 . PKNH_0926800 154 HLNIDYK|ND 0.065 . PKNH_0926800 159 YKNDNIR|DE 0.099 . PKNH_0926800 164 IRDEQIR|RV 0.122 . PKNH_0926800 165 RDEQIRR|VI 0.111 . PKNH_0926800 168 QIRRVIR|HR 0.289 . PKNH_0926800 170 RRVIRHR|YD 0.086 . PKNH_0926800 178 DALTPVK|YR 0.053 . PKNH_0926800 180 LTPVKYR|LY 0.094 . PKNH_0926800 187 LYTNGNR|EK 0.067 . PKNH_0926800 189 TNGNREK|NL 0.077 . PKNH_0926800 205 GGVSFFK|IQ 0.064 . PKNH_0926800 227 IQELLIK|NI 0.065 . PKNH_0926800 231 LIKNIYK|YI 0.092 . PKNH_0926800 255 ILNFLEK|NK 0.063 . PKNH_0926800 257 NFLEKNK|IN 0.065 . PKNH_0926800 269 LMSSSDK|NE 0.063 . PKNH_0926800 280 YSLHSSR|YL 0.119 . PKNH_0926800 289 SVSTVDR|FT 0.121 . PKNH_0926800 303 YLENINR|IY 0.076 . PKNH_0926800 311 YADEPYK|NT 0.055 . PKNH_0926800 314 EPYKNTK|AF 0.068 . PKNH_0926800 326 NILNYLK|TQ 0.051 . PKNH_0926800 340 PTINNFK|FS 0.063 . PKNH_0926800 350 SMFMHSK|NI 0.062 . PKNH_0926800 364 SGFYLSK|DT 0.074 . PKNH_0926800 376 ALDGLGK|SS 0.084 . PKNH_0926800 382 KSSYNAK|HK 0.097 . PKNH_0926800 384 SYNAKHK|TD 0.075 . PKNH_0926800 387 AKHKTDK|TA 0.079 . PKNH_0926800 391 TDKTATR|NT 0.103 . PKNH_0926800 405 SACGHMK|NE 0.067 . PKNH_0926800 418 MGNLYSR|SS 0.124 . PKNH_0926800 430 NVEVYFK|EE 0.061 . ____________________________^_________________

  • Fasta :-

    >PKNH_0926800 ATGGAGCTGTGGAAGGTGTTTGTGTACTGCGTGTTAGTAGCAATCAAACATGCAGTTGCG CCCTCAGTGTACTTCTCCGGTTTGGACATAAAAAATATGAAAGGCAAGTACAAGGAGATA GAAGAGGGACATGCCAAACAAAATGTGAATGATATATTTCTTCATGAATTAAAAAAATCG AATTATCAGCTGAACAACAATATTATCGCACTGAGCACATCGAGGCATTATTTCAACTAC AGACACACAAGCAATTTACTCACCGCATATAAATACTTGAAGAATGCTGGGGATAATATG GATAGGAACATACTGCTTATGGTGCCATTTGATCAAGCTTGCAATTGTAGAAACATGGTG GGAGGTACCATTTTTAACGAGTACGAGAAGCCTTCAAGTGAAGATTTAAAAGAAAAAAAA ATGAAAGAAAATTTGTACAGCCATTTAAATATAGACTATAAAAATGACAACATACGAGAT GAACAAATAAGGAGAGTAATTAGACATCGATATGATGCCTTAACTCCAGTTAAATATAGG TTATACACAAATGGGAACAGAGAAAAAAATCTGTTTATATACATGACTGGTCATGGAGGA GTGTCATTTTTTAAAATTCAAGATTTTAACATTGTCAGCTCTGCTGAATTTAGTCTGTAC ATACAAGAGTTACTCATAAAGAATATCTACAAATACATTTTTGTAATTATTGACACGTGT CAAGGATACAGTTTTTACGATCAAATACTAAATTTTTTAGAAAAAAATAAAATAAATAAC GTATTTTTAATGTCCTCCTCGGATAAAAATGAAAATAGCTACAGCTTGCACTCGAGCAGA TATTTAAGCGTCTCGACCGTCGATCGATTTACTTTTTATTTTTTTTCCTACCTGGAAAAT ATAAACAGAATATATGCAGACGAACCGTATAAAAATACCAAGGCCTTTTCCTTATATAAC ATCTTGAATTATTTAAAAACGCAGCATTTGATATCAACTCCAACCATTAATAATTTTAAA TTTAGCGTCTCCATGTTTATGCATAGTAAAAATATTCTTTTTTATGACTCATCCGGTTTT TATCTAAGTAAAGACACGCAGGAGGGTGCGTTGGATGGGCTTGGCAAGAGCAGTTATAAC GCCAAGCACAAGACAGACAAAACTGCAACTCGAAATACATGTTTGGGCGACTTGAGCGCA TGTGGGCATATGAAAAATGAAATACATACCCACATGGGGAACCTCTACTCTCGAAGCAGT TTCTACAACAACGTCGAGGTTTACTTCAAGGAGGAGTCCCACTTCACGGACTACTACTTT ACCGCAGAGTGTTTTTCTGGAGGGTACTTACTCCCCTCTTTCCTTTTTTTAGTGATAATC GCCTTATGTCTACTTTTTTTTCTGTTCACGTAG
  • Download Fasta

  • Fasta :-

    MELWKVFVYCVLVAIKHAVAPSVYFSGLDIKNMKGKYKEIEEGHAKQNVNDIFLHELKKS NYQLNNNIIALSTSRHYFNYRHTSNLLTAYKYLKNAGDNMDRNILLMVPFDQACNCRNMV GGTIFNEYEKPSSEDLKEKKMKENLYSHLNIDYKNDNIRDEQIRRVIRHRYDALTPVKYR LYTNGNREKNLFIYMTGHGGVSFFKIQDFNIVSSAEFSLYIQELLIKNIYKYIFVIIDTC QGYSFYDQILNFLEKNKINNVFLMSSSDKNENSYSLHSSRYLSVSTVDRFTFYFFSYLEN INRIYADEPYKNTKAFSLYNILNYLKTQHLISTPTINNFKFSVSMFMHSKNILFYDSSGF YLSKDTQEGALDGLGKSSYNAKHKTDKTATRNTCLGDLSACGHMKNEIHTHMGNLYSRSS FYNNVEVYFKEESHFTDYYFTAECFSGGYLLPSFLFLVIIALCLLFFLFT

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PKNH_0926800420 SYSRSSFYNN0.992unspPKNH_0926800420 SYSRSSFYNN0.992unspPKNH_0926800420 SYSRSSFYNN0.992unspPKNH_0926800132 SYEKPSSEDL0.997unspPKNH_0926800285 SYLSVSTVDR0.992unsp

PK11_2670w      PKH_092660      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India