PKNH_0931500 | apical membrane antigen 1

  • Computed_GO_Component_IDs:  GO:0016020      

  • Computed_GO_Components:  membrane      

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:  GO:0009405      

  • Computed_GO_Processes:  pathogenesis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

No Results
No Results

  • Fasta :-

    >PKNH_0931500 MNKIYYILFLSAQCLVHMGKCERNQKTTRLTRSANNASLEKGPIIERSIRMSNPWKAFME KYDLERAHNSGIRIDLGEDAEVGNSKYRIPAGKCPVFGKGIVIENSNVSFLTPVATGAQR LKEGGFAFPNADDHISPITIANLKERYKENADLMKLNDIALCKTHAASFVIAEDQNTSYR HPAVYDEKNKTCYMLYLSAQENMGPRYCSPDSQNKDAMFCFKPDKNEKFDNLVYLSKNVS NDWENKCPRKNLGNAKFGLWVDGNCEEIPYVNEVEARSLRECNRIVFEASASDQPRQYEE ELTDYEKIQEGFRQNNRDMIKSAFLPVGAFNSDNFKSKGRGYNWANFDSVNNKCYIFNTK PTCLINDKNFFATTALSHPQEVDNEFPCSIYKDEIEREIKKQSRNMNLYSVDKERIVLPR IFISTDKESIKCPCEPEHISNSTCNFYVCNCVEKRAEIKENNEVIIKEEFKEDYENPDGK HKKKMLLIIIGVTGAVCVVAVASLFYFRKKAQDDKYDKMDQAEAYGKTANTRKDEMLDPE ASFWGEDKRASHTTPVLMEKPYY
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_0931500.fa Sequence name : PKNH_0931500 Sequence length : 563 VALUES OF COMPUTED PARAMETERS Coef20 : 3.909 CoefTot : -0.447 ChDiff : -2 ZoneTo : 39 KR : 6 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.335 2.859 0.624 0.881 MesoH : -1.019 0.034 -0.486 0.138 MuHd_075 : 18.353 11.996 7.878 3.988 MuHd_095 : 19.377 19.858 7.386 4.809 MuHd_100 : 29.899 21.661 9.382 5.748 MuHd_105 : 43.837 20.296 11.362 7.805 Hmax_075 : 16.683 2.013 4.224 -0.362 Hmax_095 : 16.800 21.800 4.837 6.160 Hmax_100 : -3.300 20.200 5.011 6.060 Hmax_105 : 4.200 1.700 0.067 1.280 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9024 0.0976 DFMC : 0.9788 0.0212
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 563 PKNH_0931500 MNKIYYILFLSAQCLVHMGKCERNQKTTRLTRSANNASLEKGPIIERSIRMSNPWKAFMEKYDLERAHNSGIRIDLGEDA 80 EVGNSKYRIPAGKCPVFGKGIVIENSNVSFLTPVATGAQRLKEGGFAFPNADDHISPITIANLKERYKENADLMKLNDIA 160 LCKTHAASFVIAEDQNTSYRHPAVYDEKNKTCYMLYLSAQENMGPRYCSPDSQNKDAMFCFKPDKNEKFDNLVYLSKNVS 240 NDWENKCPRKNLGNAKFGLWVDGNCEEIPYVNEVEARSLRECNRIVFEASASDQPRQYEEELTDYEKIQEGFRQNNRDMI 320 KSAFLPVGAFNSDNFKSKGRGYNWANFDSVNNKCYIFNTKPTCLINDKNFFATTALSHPQEVDNEFPCSIYKDEIEREIK 400 KQSRNMNLYSVDKERIVLPRIFISTDKESIKCPCEPEHISNSTCNFYVCNCVEKRAEIKENNEVIIKEEFKEDYENPDGK 480 HKKKMLLIIIGVTGAVCVVAVASLFYFRKKAQDDKYDKMDQAEAYGKTANTRKDEMLDPEASFWGEDKRASHTTPVLMEK 560 PYY 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_0931500 3 ----MNK|IY 0.061 . PKNH_0931500 20 CLVHMGK|CE 0.063 . PKNH_0931500 23 HMGKCER|NQ 0.078 . PKNH_0931500 26 KCERNQK|TT 0.096 . PKNH_0931500 29 RNQKTTR|LT 0.100 . PKNH_0931500 32 KTTRLTR|SA 0.323 . PKNH_0931500 41 NNASLEK|GP 0.062 . PKNH_0931500 47 KGPIIER|SI 0.116 . PKNH_0931500 50 IIERSIR|MS 0.239 . PKNH_0931500 56 RMSNPWK|AF 0.083 . PKNH_0931500 61 WKAFMEK|YD 0.065 . PKNH_0931500 66 EKYDLER|AH 0.084 . PKNH_0931500 73 AHNSGIR|ID 0.077 . PKNH_0931500 86 AEVGNSK|YR 0.072 . PKNH_0931500 88 VGNSKYR|IP 0.093 . PKNH_0931500 93 YRIPAGK|CP 0.065 . PKNH_0931500 99 KCPVFGK|GI 0.075 . PKNH_0931500 120 VATGAQR|LK 0.082 . PKNH_0931500 122 TGAQRLK|EG 0.073 . PKNH_0931500 144 ITIANLK|ER 0.057 . PKNH_0931500 146 IANLKER|YK 0.142 . PKNH_0931500 148 NLKERYK|EN 0.061 . PKNH_0931500 155 ENADLMK|LN 0.072 . PKNH_0931500 163 NDIALCK|TH 0.059 . PKNH_0931500 180 DQNTSYR|HP 0.082 . PKNH_0931500 188 PAVYDEK|NK 0.057 . PKNH_0931500 190 VYDEKNK|TC 0.055 . PKNH_0931500 206 QENMGPR|YC 0.097 . PKNH_0931500 215 SPDSQNK|DA 0.075 . PKNH_0931500 222 DAMFCFK|PD 0.063 . PKNH_0931500 225 FCFKPDK|NE 0.054 . PKNH_0931500 228 KPDKNEK|FD 0.066 . PKNH_0931500 237 NLVYLSK|NV 0.069 . PKNH_0931500 246 SNDWENK|CP 0.066 . PKNH_0931500 249 WENKCPR|KN 0.086 . PKNH_0931500 250 ENKCPRK|NL 0.106 . PKNH_0931500 256 KNLGNAK|FG 0.066 . PKNH_0931500 277 VNEVEAR|SL 0.176 . PKNH_0931500 280 VEARSLR|EC 0.212 . PKNH_0931500 284 SLRECNR|IV 0.124 . PKNH_0931500 296 SASDQPR|QY 0.200 . PKNH_0931500 307 ELTDYEK|IQ 0.057 . PKNH_0931500 313 KIQEGFR|QN 0.073 . PKNH_0931500 317 GFRQNNR|DM 0.102 . PKNH_0931500 321 NNRDMIK|SA 0.088 . PKNH_0931500 336 FNSDNFK|SK 0.120 . PKNH_0931500 338 SDNFKSK|GR 0.091 . PKNH_0931500 340 NFKSKGR|GY 0.113 . PKNH_0931500 353 FDSVNNK|CY 0.069 . PKNH_0931500 360 CYIFNTK|PT 0.061 . PKNH_0931500 368 TCLINDK|NF 0.058 . PKNH_0931500 392 FPCSIYK|DE 0.063 . PKNH_0931500 397 YKDEIER|EI 0.084 . PKNH_0931500 400 EIEREIK|KQ 0.100 . PKNH_0931500 401 IEREIKK|QS 0.087 . PKNH_0931500 404 EIKKQSR|NM 0.076 . PKNH_0931500 413 NLYSVDK|ER 0.058 . PKNH_0931500 415 YSVDKER|IV 0.127 . PKNH_0931500 420 ERIVLPR|IF 0.096 . PKNH_0931500 427 IFISTDK|ES 0.058 . PKNH_0931500 431 TDKESIK|CP 0.069 . PKNH_0931500 454 VCNCVEK|RA 0.086 . PKNH_0931500 455 CNCVEKR|AE 0.184 . PKNH_0931500 459 EKRAEIK|EN 0.067 . PKNH_0931500 467 NNEVIIK|EE 0.057 . PKNH_0931500 471 IIKEEFK|ED 0.063 . PKNH_0931500 480 YENPDGK|HK 0.074 . PKNH_0931500 482 NPDGKHK|KK 0.058 . PKNH_0931500 483 PDGKHKK|KM 0.111 . PKNH_0931500 484 DGKHKKK|ML 0.145 . PKNH_0931500 508 ASLFYFR|KK 0.072 . PKNH_0931500 509 SLFYFRK|KA 0.096 . PKNH_0931500 510 LFYFRKK|AQ 0.143 . PKNH_0931500 515 KKAQDDK|YD 0.065 . PKNH_0931500 518 QDDKYDK|MD 0.059 . PKNH_0931500 527 QAEAYGK|TA 0.067 . PKNH_0931500 532 GKTANTR|KD 0.089 . PKNH_0931500 533 KTANTRK|DE 0.087 . PKNH_0931500 548 SFWGEDK|RA 0.071 . PKNH_0931500 549 FWGEDKR|AS 0.193 . PKNH_0931500 560 TPVLMEK|PY 0.069 . ____________________________^_________________

  • Fasta :-

    >PKNH_0931500 ATGAATAAAATATACTACATACTATTTTTAAGCGCTCAGTGCCTAGTGCACATGGGTAAG TGCGAACGAAACCAGAAGACCACCAGATTGACCCGCAGTGCTAACAACGCTTCATTGGAA AAGGGGCCTATCATTGAGAGAAGTATACGAATGAGTAACCCATGGAAAGCCTTCATGGAA AAGTATGATTTAGAAAGAGCACACAATTCCGGGATTAGAATTGATTTAGGGGAAGATGCA GAAGTGGGAAATTCCAAGTATAGAATACCAGCTGGAAAATGTCCAGTTTTTGGAAAGGGT ATCGTTATAGAAAATTCTAACGTTAGCTTCTTAACACCCGTAGCTACAGGAGCTCAGAGG TTGAAGGAAGGAGGTTTCGCCTTCCCCAATGCAGATGACCACATTTCCCCTATAACAATA GCAAACCTTAAAGAGAGGTATAAAGAAAATGCAGATTTGATGAAATTAAATGATATAGCC TTGTGTAAAACGCATGCAGCCAGCTTTGTCATTGCAGAGGATCAAAATACATCTTACAGA CATCCAGCTGTTTATGACGAAAAGAATAAAACATGTTACATGTTGTATTTGTCAGCGCAA GAAAATATGGGTCCACGATACTGTAGCCCAGATTCACAAAATAAAGACGCCATGTTTTGC TTCAAGCCAGATAAAAATGAAAAATTTGACAACCTGGTGTATTTAAGCAAAAACGTAAGT AATGATTGGGAAAACAAGTGCCCGCGTAAAAATTTAGGAAACGCAAAATTTGGATTATGG GTGGATGGGAACTGTGAAGAAATACCATACGTTAATGAAGTGGAGGCAAGGAGCCTACGG GAATGCAACCGAATCGTTTTCGAAGCTAGCGCTTCAGATCAACCACGTCAGTACGAAGAA GAACTGACAGATTATGAAAAAATACAAGAGGGATTTAGACAAAATAATCGGGACATGATT AAAAGTGCCTTTCTTCCAGTGGGTGCATTTAACTCAGACAATTTTAAGAGTAAAGGAAGA GGATATAACTGGGCAAATTTCGATTCTGTAAATAATAAGTGTTACATTTTTAATACCAAA CCTACGTGTCTCATTAATGACAAAAATTTTTTTGCAACAACAGCGTTATCTCACCCTCAA GAAGTAGACAATGAATTTCCATGCAGCATATACAAAGATGAAATTGAAAGAGAAATTAAG AAACAGTCGAGAAATATGAATCTGTACAGTGTTGATAAGGAACGGATTGTCTTGCCAAGG ATATTTATCTCCACCGATAAGGAGAGTATCAAATGTCCATGTGAGCCTGAACACATTTCC AATAGTACCTGCAACTTTTACGTTTGTAACTGTGTAGAGAAGAGAGCAGAAATTAAGGAA AATAACGAAGTTATCATAAAGGAAGAATTTAAGGAGGATTATGAAAATCCGGACGGCAAA CATAAGAAGAAGATGCTACTAATTATTATCGGAGTAACTGGAGCTGTTTGTGTCGTCGCA GTAGCCTCCTTGTTTTACTTCAGGAAGAAGGCTCAAGATGATAAGTATGATAAGATGGAT CAGGCAGAAGCGTACGGAAAAACCGCCAATACTAGGAAGGATGAGATGCTCGACCCCGAG GCGTCCTTCTGGGGAGAGGACAAGCGAGCCTCCCACACCACGCCTGTTCTGATGGAGAAG CCTTACTACTGA
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  • Fasta :-

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PKNH_0931500474 YFKEDYENPD0.993unspPKNH_0931500474 YFKEDYENPD0.993unspPKNH_0931500474 YFKEDYENPD0.993unspPKNH_0931500551 SDKRASHTTP0.991unspPKNH_0931500290 SVFEASASDQ0.994unspPKNH_0931500429 STDKESIKCP0.994unsp

PK11_3160w      PKH_093110      PkAMA1, PkAMA-1      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India