PKNH_1005500 | ubiquitin carboxyl-terminal hydrolase 14, putative

_IDPredictionOTHERSPmTPCS_Position
PKNH_1005500OTHER0.9998790.0000430.000077
No Results

  • Fasta :-

    >PKNH_1005500 MTIVNVTVKWKSHVYNDLQLDTSKPILTFKEILWTLTNVPPEKQKLMYKGLIKDDTDLST LNIKNNDKIMLVGSAETLVEGPSHVVFVEDLSKEDKEKIHAKENILFEDQGIVNLGNTCY FNAVLQFLTSFDDLGSFLCNIKRKEKYLLKSTNDILFDSYIHFSQTFGKSPEPYVPLELL KSFRDVFPKFRTVNLRTKQFAQQDAEECMNAILTSLNDHTECKISDKLFSFKVISKIRCI EDDATGGEKPTKENASGDNAPSENTPNTLQGEEIETTEEFHNKLICYMGTHTTPVNHMHE GIRLSLIEKIQKQRSEDSKEDALFEKKSEMNSLPPYLIVHFLRFESKKISESNNAISVVT AKICRKVSFPETFDIYDFCTDELKTQLKVARNIVMKRKEADLNARGGAEGVGGNTATSPQ KKEGVNDNSVNERANDSTNGVTNGVTNGVTNGATNGATDGATDGITNAVTNAVTNAVTDA VTSDEPTAANHVDDKGSRPTGDLTEIPTGEYELISIITHKGRNEESGHYIAWKKMRSSIG TDSNTYKEELTGNKKKGKDSLWYKMDDDKVSTHKFSSLDLCGGCSDFNIAILLLYKRKTL LCTQEELNSHGN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_1005500.fa Sequence name : PKNH_1005500 Sequence length : 612 VALUES OF COMPUTED PARAMETERS Coef20 : 3.944 CoefTot : -0.778 ChDiff : -15 ZoneTo : 16 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.900 1.500 0.175 0.524 MesoH : -0.927 0.107 -0.491 0.169 MuHd_075 : 6.559 13.347 3.152 3.168 MuHd_095 : 21.406 18.360 8.161 5.344 MuHd_100 : 19.243 19.682 7.338 5.414 MuHd_105 : 13.037 15.878 4.894 4.198 Hmax_075 : 5.833 13.800 -1.428 3.900 Hmax_095 : 5.775 10.800 -0.269 3.946 Hmax_100 : 5.400 11.600 -0.225 4.560 Hmax_105 : 6.400 13.700 -0.157 4.037 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9533 0.0467 DFMC : 0.9755 0.0245
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 612 PKNH_1005500 MTIVNVTVKWKSHVYNDLQLDTSKPILTFKEILWTLTNVPPEKQKLMYKGLIKDDTDLSTLNIKNNDKIMLVGSAETLVE 80 GPSHVVFVEDLSKEDKEKIHAKENILFEDQGIVNLGNTCYFNAVLQFLTSFDDLGSFLCNIKRKEKYLLKSTNDILFDSY 160 IHFSQTFGKSPEPYVPLELLKSFRDVFPKFRTVNLRTKQFAQQDAEECMNAILTSLNDHTECKISDKLFSFKVISKIRCI 240 EDDATGGEKPTKENASGDNAPSENTPNTLQGEEIETTEEFHNKLICYMGTHTTPVNHMHEGIRLSLIEKIQKQRSEDSKE 320 DALFEKKSEMNSLPPYLIVHFLRFESKKISESNNAISVVTAKICRKVSFPETFDIYDFCTDELKTQLKVARNIVMKRKEA 400 DLNARGGAEGVGGNTATSPQKKEGVNDNSVNERANDSTNGVTNGVTNGVTNGATNGATDGATDGITNAVTNAVTNAVTDA 480 VTSDEPTAANHVDDKGSRPTGDLTEIPTGEYELISIITHKGRNEESGHYIAWKKMRSSIGTDSNTYKEELTGNKKKGKDS 560 LWYKMDDDKVSTHKFSSLDLCGGCSDFNIAILLLYKRKTLLCTQEELNSHGN 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 .................................................... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_1005500 9 IVNVTVK|WK 0.077 . PKNH_1005500 11 NVTVKWK|SH 0.070 . PKNH_1005500 24 LQLDTSK|PI 0.060 . PKNH_1005500 30 KPILTFK|EI 0.069 . PKNH_1005500 43 TNVPPEK|QK 0.061 . PKNH_1005500 45 VPPEKQK|LM 0.066 . PKNH_1005500 49 KQKLMYK|GL 0.070 . PKNH_1005500 53 MYKGLIK|DD 0.061 . PKNH_1005500 64 LSTLNIK|NN 0.062 . PKNH_1005500 68 NIKNNDK|IM 0.056 . PKNH_1005500 93 FVEDLSK|ED 0.056 . PKNH_1005500 96 DLSKEDK|EK 0.070 . PKNH_1005500 98 SKEDKEK|IH 0.066 . PKNH_1005500 102 KEKIHAK|EN 0.081 . PKNH_1005500 142 SFLCNIK|RK 0.058 . PKNH_1005500 143 FLCNIKR|KE 0.123 . PKNH_1005500 144 LCNIKRK|EK 0.088 . PKNH_1005500 146 NIKRKEK|YL 0.155 . PKNH_1005500 150 KEKYLLK|ST 0.098 . PKNH_1005500 169 FSQTFGK|SP 0.103 . PKNH_1005500 181 VPLELLK|SF 0.087 . PKNH_1005500 184 ELLKSFR|DV 0.237 . PKNH_1005500 189 FRDVFPK|FR 0.082 . PKNH_1005500 191 DVFPKFR|TV 0.099 . PKNH_1005500 196 FRTVNLR|TK 0.089 . PKNH_1005500 198 TVNLRTK|QF 0.073 . PKNH_1005500 223 NDHTECK|IS 0.070 . PKNH_1005500 227 ECKISDK|LF 0.065 . PKNH_1005500 232 DKLFSFK|VI 0.079 . PKNH_1005500 236 SFKVISK|IR 0.061 . PKNH_1005500 238 KVISKIR|CI 0.113 . PKNH_1005500 249 DATGGEK|PT 0.056 . PKNH_1005500 252 GGEKPTK|EN 0.069 . PKNH_1005500 283 TEEFHNK|LI 0.085 . PKNH_1005500 303 HMHEGIR|LS 0.075 . PKNH_1005500 309 RLSLIEK|IQ 0.060 . PKNH_1005500 312 LIEKIQK|QR 0.057 . PKNH_1005500 314 EKIQKQR|SE 0.166 . PKNH_1005500 319 QRSEDSK|ED 0.070 . PKNH_1005500 326 EDALFEK|KS 0.062 . PKNH_1005500 327 DALFEKK|SE 0.107 . PKNH_1005500 343 LIVHFLR|FE 0.137 . PKNH_1005500 347 FLRFESK|KI 0.078 . PKNH_1005500 348 LRFESKK|IS 0.127 . PKNH_1005500 362 ISVVTAK|IC 0.070 . PKNH_1005500 365 VTAKICR|KV 0.117 . PKNH_1005500 366 TAKICRK|VS 0.089 . PKNH_1005500 384 FCTDELK|TQ 0.052 . PKNH_1005500 388 ELKTQLK|VA 0.066 . PKNH_1005500 391 TQLKVAR|NI 0.113 . PKNH_1005500 396 ARNIVMK|RK 0.083 . PKNH_1005500 397 RNIVMKR|KE 0.140 . PKNH_1005500 398 NIVMKRK|EA 0.102 . PKNH_1005500 405 EADLNAR|GG 0.090 . PKNH_1005500 421 TATSPQK|KE 0.066 . PKNH_1005500 422 ATSPQKK|EG 0.088 . PKNH_1005500 433 DNSVNER|AN 0.109 . PKNH_1005500 495 ANHVDDK|GS 0.076 . PKNH_1005500 498 VDDKGSR|PT 0.095 . PKNH_1005500 520 ISIITHK|GR 0.068 . PKNH_1005500 522 IITHKGR|NE 0.097 . PKNH_1005500 533 GHYIAWK|KM 0.071 . PKNH_1005500 534 HYIAWKK|MR 0.123 . PKNH_1005500 536 IAWKKMR|SS 0.184 . PKNH_1005500 547 TDSNTYK|EE 0.075 . PKNH_1005500 554 EELTGNK|KK 0.056 . PKNH_1005500 555 ELTGNKK|KG 0.074 . PKNH_1005500 556 LTGNKKK|GK 0.121 . PKNH_1005500 558 GNKKKGK|DS 0.084 . PKNH_1005500 564 KDSLWYK|MD 0.090 . PKNH_1005500 569 YKMDDDK|VS 0.063 . PKNH_1005500 574 DKVSTHK|FS 0.070 . PKNH_1005500 596 AILLLYK|RK 0.051 . PKNH_1005500 597 ILLLYKR|KT 0.100 . PKNH_1005500 598 LLLYKRK|TL 0.075 . ____________________________^_________________

  • Fasta :-

    >PKNH_1005500 ATGACAATTGTTAATGTGACAGTAAAATGGAAGAGTCATGTGTACAACGATCTACAACTC GACACGTCTAAGCCCATCTTGACATTCAAGGAGATTCTCTGGACTCTCACCAACGTTCCT CCAGAAAAACAAAAACTGATGTATAAAGGCCTCATCAAAGATGATACAGATCTATCCACA TTAAACATAAAAAATAATGACAAAATTATGTTAGTAGGTTCAGCGGAGACTTTAGTAGAA GGGCCATCCCATGTAGTTTTTGTGGAGGATCTCTCCAAAGAAGATAAAGAGAAAATACAC GCAAAAGAAAATATCCTTTTTGAAGATCAAGGAATTGTGAATTTAGGAAACACCTGCTAC TTCAACGCAGTATTGCAATTCTTAACATCCTTTGACGATTTAGGATCTTTCCTTTGCAAC ATAAAAAGAAAGGAAAAGTATTTATTGAAATCCACAAACGATATTTTATTCGATTCATAT ATTCACTTTTCTCAAACGTTTGGAAAATCTCCCGAACCATATGTCCCTCTAGAATTGTTG AAATCCTTTAGGGATGTGTTTCCAAAATTTAGAACTGTAAATTTAAGGACGAAACAATTT GCACAACAGGACGCAGAAGAATGCATGAACGCCATTCTCACGTCATTGAATGATCATACC GAGTGTAAAATTAGTGATAAGTTATTTTCGTTTAAGGTGATCAGTAAAATTAGATGCATA GAGGACGATGCTACAGGGGGAGAGAAACCAACTAAGGAAAACGCTTCAGGGGATAACGCA CCAAGTGAAAACACACCCAATACACTCCAAGGTGAAGAAATAGAAACAACAGAAGAGTTC CACAATAAACTAATATGTTACATGGGAACACACACAACCCCTGTGAACCACATGCATGAA GGAATACGACTATCCTTGATTGAAAAAATCCAAAAGCAGCGATCTGAGGATAGTAAGGAA GATGCCTTGTTTGAAAAAAAATCAGAAATGAACTCCCTCCCTCCATATCTAATTGTTCAC TTTTTACGTTTTGAATCAAAGAAGATCTCAGAGTCGAATAATGCCATTTCCGTCGTTACT GCCAAGATATGCAGAAAGGTCAGTTTCCCAGAAACGTTTGATATTTATGATTTCTGCACA GATGAACTAAAGACTCAATTGAAAGTAGCTAGGAATATTGTGATGAAGAGGAAGGAAGCG GACTTGAACGCCCGCGGGGGTGCCGAAGGTGTCGGAGGAAACACTGCCACAAGTCCGCAG AAAAAGGAGGGCGTGAACGATAATAGTGTCAATGAGAGGGCAAACGACAGCACGAACGGT GTTACGAACGGTGTTACGAACGGTGTTACGAACGGCGCTACGAACGGCGCTACGGACGGC GCTACGGACGGCATTACAAACGCTGTTACGAATGCTGTTACAAACGCTGTTACAGACGCC GTGACGAGCGATGAGCCAACAGCTGCGAACCATGTGGATGATAAGGGTAGCAGACCAACG GGGGATTTGACGGAAATCCCCACGGGGGAATATGAATTAATTTCAATAATCACACACAAG GGGAGAAATGAAGAAAGTGGTCATTACATTGCTTGGAAGAAAATGAGGAGCTCCATAGGC ACAGATAGCAATACGTACAAAGAAGAACTAACAGGTAATAAAAAAAAAGGAAAGGATTCC TTGTGGTATAAGATGGATGATGATAAGGTAAGTACTCATAAATTTTCTTCCCTTGATTTA TGTGGAGGGTGTAGTGATTTTAACATAGCTATATTGCTTTTGTATAAACGAAAGACCCTG TTATGCACACAGGAAGAGTTGAACTCCCATGGGAACTGA
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  • Fasta :-

    MTIVNVTVKWKSHVYNDLQLDTSKPILTFKEILWTLTNVPPEKQKLMYKGLIKDDTDLST LNIKNNDKIMLVGSAETLVEGPSHVVFVEDLSKEDKEKIHAKENILFEDQGIVNLGNTCY FNAVLQFLTSFDDLGSFLCNIKRKEKYLLKSTNDILFDSYIHFSQTFGKSPEPYVPLELL KSFRDVFPKFRTVNLRTKQFAQQDAEECMNAILTSLNDHTECKISDKLFSFKVISKIRCI EDDATGGEKPTKENASGDNAPSENTPNTLQGEEIETTEEFHNKLICYMGTHTTPVNHMHE GIRLSLIEKIQKQRSEDSKEDALFEKKSEMNSLPPYLIVHFLRFESKKISESNNAISVVT AKICRKVSFPETFDIYDFCTDELKTQLKVARNIVMKRKEADLNARGGAEGVGGNTATSPQ KKEGVNDNSVNERANDSTNGVTNGVTNGVTNGATNGATDGATDGITNAVTNAVTNAVTDA VTSDEPTAANHVDDKGSRPTGDLTEIPTGEYELISIITHKGRNEESGHYIAWKKMRSSIG TDSNTYKEELTGNKKKGKDSLWYKMDDDKVSTHKFSSLDLCGGCSDFNIAILLLYKRKTL LCTQEELNSHGN

  • title: Active Site
  • coordinates: N114,C119,H528,D567
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PKNH_1005500368 SCRKVSFPET0.995unspPKNH_1005500368 SCRKVSFPET0.995unspPKNH_1005500368 SCRKVSFPET0.995unspPKNH_1005500483 SDAVTSDEPT0.993unspPKNH_100550092 SVEDLSKEDK0.998unspPKNH_1005500318 SRSEDSKEDA0.997unsp

PK5_2690c      PKH_100480      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India