PKNH_1117000 | metacaspase-1, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:  GO:0008233      

  • Curated_GO_Functions:  peptidase activity      

  • Curated_GO_Processes:  apoptotic process      proteolysis      

_IDPredictionOTHERSPmTPCS_Position
PKNH_1117000OTHER0.9999190.0000640.000016
No Results

  • Fasta :-

    >PKNH_1117000 MEKIYLKVFELTGLKEDDTGKYYIKVYWKNKKYKTAVQEDGCYFFNEVFLIPVEHVVDEK NEILSIEVWLSSLFNTKVAYTFFTLDFMKKEKTVKQKVQLIDILKSCTLELSVNIVRDQM DVTFFNVKEIYLHKTDKEIKDAISMHRTESEVLRLFRNEYARKISSPPLTMPAHGNQWTG QGAPSTNQWEGQIVHSTNRYLQRDNLPKENMHSPNEKESYAYAANPYVPMTPATGLTNSH YHYNPAVQQNELTSAGGKIPVSVPSQLNSGAVLANHSAHHAGMNINTDRGNPSEKYGLYN PHMVDSFYGGGNHTNQVTYHNGMYNVGAASPYSDKILYRSSRNKKKALLIGINYYGSKEE LSGCTNDTVRMMNLLISKYNFHDSPTSMVRLIDNESNPNYRPTRKNILSALTWLTKDNEP GDVFFFLYSGHGSQQKDYTYLEDDGYNETILPCDHKTEGQIIDDELHRFLVQPLNDGVKL IAIMDCCNAGSCIDLAYKYKLKSRKWKEVKNPFHVVCDVSQFSGCKDMEFSHEIDTGRHA PGGALITAMIHVLGASEATQRPTRGTDSLTYDHLLQNVSSYIQSYHDQKIVFMASQKFDL NRVFDFDHILKNKNGNLGQNVNKLVHKNKKTKKNKHEFFSFF
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_1117000.fa Sequence name : PKNH_1117000 Sequence length : 642 VALUES OF COMPUTED PARAMETERS Coef20 : 3.056 CoefTot : 0.000 ChDiff : 3 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.518 1.424 0.233 0.597 MesoH : -0.428 0.339 -0.469 0.185 MuHd_075 : 25.853 14.348 7.651 5.036 MuHd_095 : 30.566 11.221 7.856 4.730 MuHd_100 : 26.526 11.843 6.394 3.668 MuHd_105 : 18.152 12.242 4.480 2.894 Hmax_075 : 4.667 13.300 0.699 5.110 Hmax_095 : 5.338 7.900 -0.434 3.810 Hmax_100 : 3.600 8.500 -1.014 2.950 Hmax_105 : -3.300 10.800 -2.225 2.940 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9408 0.0592 DFMC : 0.9145 0.0855
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 642 PKNH_1117000 MEKIYLKVFELTGLKEDDTGKYYIKVYWKNKKYKTAVQEDGCYFFNEVFLIPVEHVVDEKNEILSIEVWLSSLFNTKVAY 80 TFFTLDFMKKEKTVKQKVQLIDILKSCTLELSVNIVRDQMDVTFFNVKEIYLHKTDKEIKDAISMHRTESEVLRLFRNEY 160 ARKISSPPLTMPAHGNQWTGQGAPSTNQWEGQIVHSTNRYLQRDNLPKENMHSPNEKESYAYAANPYVPMTPATGLTNSH 240 YHYNPAVQQNELTSAGGKIPVSVPSQLNSGAVLANHSAHHAGMNINTDRGNPSEKYGLYNPHMVDSFYGGGNHTNQVTYH 320 NGMYNVGAASPYSDKILYRSSRNKKKALLIGINYYGSKEELSGCTNDTVRMMNLLISKYNFHDSPTSMVRLIDNESNPNY 400 RPTRKNILSALTWLTKDNEPGDVFFFLYSGHGSQQKDYTYLEDDGYNETILPCDHKTEGQIIDDELHRFLVQPLNDGVKL 480 IAIMDCCNAGSCIDLAYKYKLKSRKWKEVKNPFHVVCDVSQFSGCKDMEFSHEIDTGRHAPGGALITAMIHVLGASEATQ 560 RPTRGTDSLTYDHLLQNVSSYIQSYHDQKIVFMASQKFDLNRVFDFDHILKNKNGNLGQNVNKLVHKNKKTKKNKHEFFS 640 FF 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 .. 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_1117000 3 ----MEK|IY 0.061 . PKNH_1117000 7 MEKIYLK|VF 0.055 . PKNH_1117000 15 FELTGLK|ED 0.053 . PKNH_1117000 21 KEDDTGK|YY 0.065 . PKNH_1117000 25 TGKYYIK|VY 0.061 . PKNH_1117000 29 YIKVYWK|NK 0.058 . PKNH_1117000 31 KVYWKNK|KY 0.066 . PKNH_1117000 32 VYWKNKK|YK 0.125 . PKNH_1117000 34 WKNKKYK|TA 0.106 . PKNH_1117000 60 EHVVDEK|NE 0.057 . PKNH_1117000 77 SSLFNTK|VA 0.064 . PKNH_1117000 89 FTLDFMK|KE 0.057 . PKNH_1117000 90 TLDFMKK|EK 0.101 . PKNH_1117000 92 DFMKKEK|TV 0.082 . PKNH_1117000 95 KKEKTVK|QK 0.067 . PKNH_1117000 97 EKTVKQK|VQ 0.060 . PKNH_1117000 105 QLIDILK|SC 0.068 . PKNH_1117000 117 LSVNIVR|DQ 0.101 . PKNH_1117000 128 VTFFNVK|EI 0.059 . PKNH_1117000 134 KEIYLHK|TD 0.060 . PKNH_1117000 137 YLHKTDK|EI 0.086 . PKNH_1117000 140 KTDKEIK|DA 0.079 . PKNH_1117000 147 DAISMHR|TE 0.097 . PKNH_1117000 154 TESEVLR|LF 0.102 . PKNH_1117000 157 EVLRLFR|NE 0.139 . PKNH_1117000 162 FRNEYAR|KI 0.125 . PKNH_1117000 163 RNEYARK|IS 0.099 . PKNH_1117000 199 IVHSTNR|YL 0.083 . PKNH_1117000 203 TNRYLQR|DN 0.208 . PKNH_1117000 208 QRDNLPK|EN 0.070 . PKNH_1117000 217 MHSPNEK|ES 0.074 . PKNH_1117000 258 LTSAGGK|IP 0.062 . PKNH_1117000 289 MNINTDR|GN 0.093 . PKNH_1117000 295 RGNPSEK|YG 0.073 . PKNH_1117000 335 ASPYSDK|IL 0.062 . PKNH_1117000 339 SDKILYR|SS 0.151 . PKNH_1117000 342 ILYRSSR|NK 0.297 . PKNH_1117000 344 YRSSRNK|KK 0.067 . PKNH_1117000 345 RSSRNKK|KA 0.386 . PKNH_1117000 346 SSRNKKK|AL 0.173 . PKNH_1117000 358 INYYGSK|EE 0.056 . PKNH_1117000 370 CTNDTVR|MM 0.075 . PKNH_1117000 378 MNLLISK|YN 0.063 . PKNH_1117000 390 SPTSMVR|LI 0.084 . PKNH_1117000 401 ESNPNYR|PT 0.109 . PKNH_1117000 404 PNYRPTR|KN 0.193 . PKNH_1117000 405 NYRPTRK|NI 0.093 . PKNH_1117000 416 ALTWLTK|DN 0.075 . PKNH_1117000 436 GHGSQQK|DY 0.082 . PKNH_1117000 456 ILPCDHK|TE 0.078 . PKNH_1117000 468 IDDELHR|FL 0.091 . PKNH_1117000 479 PLNDGVK|LI 0.060 . PKNH_1117000 498 CIDLAYK|YK 0.060 . PKNH_1117000 500 DLAYKYK|LK 0.071 . PKNH_1117000 502 AYKYKLK|SR 0.073 . PKNH_1117000 504 KYKLKSR|KW 0.094 . PKNH_1117000 505 YKLKSRK|WK 0.102 . PKNH_1117000 507 LKSRKWK|EV 0.397 . PKNH_1117000 510 RKWKEVK|NP 0.069 . PKNH_1117000 526 SQFSGCK|DM 0.064 . PKNH_1117000 538 HEIDTGR|HA 0.108 . PKNH_1117000 561 ASEATQR|PT 0.084 . PKNH_1117000 564 ATQRPTR|GT 0.289 . PKNH_1117000 589 QSYHDQK|IV 0.077 . PKNH_1117000 597 VFMASQK|FD 0.060 . PKNH_1117000 602 QKFDLNR|VF 0.076 . PKNH_1117000 611 DFDHILK|NK 0.059 . PKNH_1117000 613 DHILKNK|NG 0.061 . PKNH_1117000 623 LGQNVNK|LV 0.089 . PKNH_1117000 627 VNKLVHK|NK 0.066 . PKNH_1117000 629 KLVHKNK|KT 0.082 . PKNH_1117000 630 LVHKNKK|TK 0.100 . PKNH_1117000 632 HKNKKTK|KN 0.087 . PKNH_1117000 633 KNKKTKK|NK 0.125 . PKNH_1117000 635 KKTKKNK|HE 0.071 . ____________________________^_________________

  • Fasta :-

    >PKNH_1117000 ATGGAGAAGATTTACCTGAAGGTGTTCGAACTGACCGGGTTGAAAGAAGACGATACAGGA AAATACTACATAAAAGTGTATTGGAAAAACAAAAAGTACAAAACGGCAGTGCAGGAAGAT GGGTGCTATTTTTTCAACGAAGTTTTCCTCATACCGGTAGAGCACGTAGTGGATGAAAAG AACGAAATCTTGTCCATCGAAGTGTGGCTTAGCTCATTATTTAATACGAAAGTTGCCTAT ACTTTTTTTACGTTAGATTTTATGAAAAAGGAAAAAACAGTGAAGCAAAAAGTGCAGCTA ATTGACATATTAAAAAGCTGTACTCTGGAGTTGTCTGTAAATATAGTACGAGACCAAATG GATGTAACTTTTTTTAACGTTAAAGAAATATATCTACATAAGACGGATAAAGAGATAAAG GATGCCATTTCGATGCATCGAACTGAATCGGAAGTTCTTCGACTGTTCCGAAATGAATAC GCTCGCAAAATTAGTTCACCTCCCCTAACGATGCCTGCACATGGAAATCAATGGACAGGA CAGGGTGCACCTTCCACGAACCAATGGGAAGGACAAATTGTACATTCCACGAATCGGTAC CTTCAAAGGGATAATCTTCCAAAGGAGAACATGCACTCTCCCAATGAGAAAGAATCATAT GCGTACGCGGCAAATCCCTATGTACCCATGACCCCCGCGACGGGTTTGACGAATAGTCAC TACCACTACAATCCCGCGGTTCAACAAAATGAATTAACCTCTGCAGGTGGCAAAATCCCC GTTTCTGTGCCCAGTCAGTTGAATAGTGGGGCTGTTCTGGCCAATCATTCTGCACATCAT GCAGGTATGAATATCAACACGGACAGAGGTAATCCCAGCGAGAAATATGGCCTGTATAAC CCTCATATGGTTGATAGTTTTTACGGAGGGGGGAATCACACAAACCAAGTTACCTACCAT AATGGCATGTACAACGTTGGTGCAGCGTCACCCTACTCAGATAAAATCCTGTACCGCTCA TCTAGAAACAAAAAAAAAGCACTACTCATCGGAATAAACTATTACGGTTCTAAGGAAGAA TTAAGTGGTTGTACAAATGACACTGTTCGAATGATGAACCTGCTAATTTCAAAATATAAT TTTCACGATTCTCCAACAAGCATGGTTAGATTAATTGACAACGAAAGCAACCCTAATTAT AGACCTACCAGAAAAAATATTTTGTCCGCCCTGACTTGGCTCACCAAGGATAATGAGCCT GGAGATGTTTTTTTTTTTCTATACTCTGGACATGGGTCTCAACAAAAGGATTACACATAC TTGGAAGATGATGGATATAATGAGACCATCCTTCCTTGTGATCATAAAACGGAGGGGCAA ATTATCGATGATGAGTTGCACAGGTTCTTGGTTCAACCTCTGAACGATGGTGTTAAATTA ATAGCGATTATGGACTGCTGTAATGCGGGTAGTTGTATCGATCTGGCTTATAAGTATAAA CTAAAATCGAGGAAATGGAAGGAGGTAAAAAACCCCTTCCATGTGGTTTGCGATGTTAGC CAATTTAGTGGGTGCAAGGATATGGAGTTTTCGCACGAAATTGACACAGGGAGGCATGCC CCCGGGGGGGCACTCATCACAGCGATGATACATGTTTTGGGGGCAAGCGAGGCAACACAG AGACCAACACGTGGGACCGATTCACTCACTTACGACCACCTACTGCAAAACGTGAGCAGC TACATCCAGAGTTATCACGACCAGAAAATTGTTTTCATGGCTTCTCAAAAATTCGACCTT AATCGCGTTTTCGACTTTGATCACATCCTCAAAAATAAAAATGGCAATTTAGGGCAAAAT GTGAACAAACTCGTTCACAAAAATAAGAAGACCAAGAAGAACAAACACGAATTCTTCTCC TTCTTCTGA
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  • Fasta :-

    MEKIYLKVFELTGLKEDDTGKYYIKVYWKNKKYKTAVQEDGCYFFNEVFLIPVEHVVDEK NEILSIEVWLSSLFNTKVAYTFFTLDFMKKEKTVKQKVQLIDILKSCTLELSVNIVRDQM DVTFFNVKEIYLHKTDKEIKDAISMHRTESEVLRLFRNEYARKISSPPLTMPAHGNQWTG QGAPSTNQWEGQIVHSTNRYLQRDNLPKENMHSPNEKESYAYAANPYVPMTPATGLTNSH YHYNPAVQQNELTSAGGKIPVSVPSQLNSGAVLANHSAHHAGMNINTDRGNPSEKYGLYN PHMVDSFYGGGNHTNQVTYHNGMYNVGAASPYSDKILYRSSRNKKKALLIGINYYGSKEE LSGCTNDTVRMMNLLISKYNFHDSPTSMVRLIDNESNPNYRPTRKNILSALTWLTKDNEP GDVFFFLYSGHGSQQKDYTYLEDDGYNETILPCDHKTEGQIIDDELHRFLVQPLNDGVKL IAIMDCCNAGSCIDLAYKYKLKSRKWKEVKNPFHVVCDVSQFSGCKDMEFSHEIDTGRHA PGGALITAMIHVLGASEATQRPTRGTDSLTYDHLLQNVSSYIQSYHDQKIVFMASQKFDL NRVFDFDHILKNKNGNLGQNVNKLVHKNKKTKKNKHEFFSFF

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PKNH_1117000503 SYKLKSRKWK0.996unspPKNH_1117000503 SYKLKSRKWK0.996unspPKNH_1117000503 SYKLKSRKWK0.996unspPKNH_1117000144 SKDAISMHRT0.996unspPKNH_1117000213 SENMHSPNEK0.992unsp

PK13_5450c      PKH_111640      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India