PKNH_1223800 | knowpain-1

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PKNH_1223800OTHER0.9996230.0000310.000346
No Results

  • Fasta :-

    >PKNH_1223800 MAQNMSIMNLTKSSLEALNRNQMLSKRRNRKILKICIYIVLTFVMCGVVFVCFTTISRND WSLNRSDNLKDSSFNSGDGDILNKAEIETLKFIFSKYPQGKKDLSGDEVEALADAAISNE EDEKIKIEEPGKHIKLMKKYNEVVADLSQENREQLAKMLKELLKKKMNEKKTGKKDPNSV NGEEGKEDINGGLSNFNFDSVGANEDDNGGDAVLSEEHIEGLFFNLKYASKFFKFMNKYN RNYKDITEQMEKYENFKINYLKIKKHNETSQMYRMRLNQFSDYSKKDFENYFRKLLPIPD HLKKKYVVPFASLNNVKGKMVDSNKSADIFTDVPEILDYREKGIVHEPKDQGLCGSCWAF ASVGNVECIYAKEHDKTILTLSEQEIVDCSKLNFGCDGGHPFYSFIYAIENGICLGADYK YIAMDNLFCLNYRCKNKITLSSVGGVKENELIRALNEVGPVSVNVGVTDDFSFYDGGIFN GTCTEELNHSVLLVGYGQVQTSKIFQQNNIYDDANGLTKKGAIASPSKANDDGIQYYWII KNSWSKYWGENGFMRLSRNKEGDNVFCGIGVEVFYPIL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_1223800.fa Sequence name : PKNH_1223800 Sequence length : 578 VALUES OF COMPUTED PARAMETERS Coef20 : 4.440 CoefTot : 0.043 ChDiff : -4 ZoneTo : 59 KR : 9 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.471 2.847 0.722 0.889 MesoH : -0.603 0.313 -0.299 0.234 MuHd_075 : 35.808 23.340 10.574 7.269 MuHd_095 : 36.245 25.378 11.519 8.111 MuHd_100 : 38.021 23.970 11.112 8.477 MuHd_105 : 35.368 20.841 11.454 7.715 Hmax_075 : 8.867 9.800 -0.119 2.060 Hmax_095 : 13.900 21.000 2.474 5.871 Hmax_100 : 6.400 18.800 7.112 5.710 Hmax_105 : 7.000 10.500 -0.054 0.035 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.3699 0.6301 DFMC : 0.4860 0.5140 This protein is probably imported in mitochondria. f(Ser) = 0.0847 f(Arg) = 0.0847 CMi = 0.44924 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 578 PKNH_1223800 MAQNMSIMNLTKSSLEALNRNQMLSKRRNRKILKICIYIVLTFVMCGVVFVCFTTISRNDWSLNRSDNLKDSSFNSGDGD 80 ILNKAEIETLKFIFSKYPQGKKDLSGDEVEALADAAISNEEDEKIKIEEPGKHIKLMKKYNEVVADLSQENREQLAKMLK 160 ELLKKKMNEKKTGKKDPNSVNGEEGKEDINGGLSNFNFDSVGANEDDNGGDAVLSEEHIEGLFFNLKYASKFFKFMNKYN 240 RNYKDITEQMEKYENFKINYLKIKKHNETSQMYRMRLNQFSDYSKKDFENYFRKLLPIPDHLKKKYVVPFASLNNVKGKM 320 VDSNKSADIFTDVPEILDYREKGIVHEPKDQGLCGSCWAFASVGNVECIYAKEHDKTILTLSEQEIVDCSKLNFGCDGGH 400 PFYSFIYAIENGICLGADYKYIAMDNLFCLNYRCKNKITLSSVGGVKENELIRALNEVGPVSVNVGVTDDFSFYDGGIFN 480 GTCTEELNHSVLLVGYGQVQTSKIFQQNNIYDDANGLTKKGAIASPSKANDDGIQYYWIIKNSWSKYWGENGFMRLSRNK 560 EGDNVFCGIGVEVFYPIL 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 .................. 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_1223800 12 SIMNLTK|SS 0.083 . PKNH_1223800 20 SLEALNR|NQ 0.073 . PKNH_1223800 26 RNQMLSK|RR 0.061 . PKNH_1223800 27 NQMLSKR|RN 0.187 . PKNH_1223800 28 QMLSKRR|NR 0.093 . PKNH_1223800 30 LSKRRNR|KI 0.276 . PKNH_1223800 31 SKRRNRK|IL 0.279 . PKNH_1223800 34 RNRKILK|IC 0.068 . PKNH_1223800 58 CFTTISR|ND 0.060 . PKNH_1223800 65 NDWSLNR|SD 0.094 . PKNH_1223800 70 NRSDNLK|DS 0.083 . PKNH_1223800 84 DGDILNK|AE 0.057 . PKNH_1223800 91 AEIETLK|FI 0.074 . PKNH_1223800 96 LKFIFSK|YP 0.071 . PKNH_1223800 101 SKYPQGK|KD 0.069 . PKNH_1223800 102 KYPQGKK|DL 0.113 . PKNH_1223800 124 SNEEDEK|IK 0.061 . PKNH_1223800 126 EEDEKIK|IE 0.067 . PKNH_1223800 132 KIEEPGK|HI 0.061 . PKNH_1223800 135 EPGKHIK|LM 0.067 . PKNH_1223800 138 KHIKLMK|KY 0.074 . PKNH_1223800 139 HIKLMKK|YN 0.116 . PKNH_1223800 152 DLSQENR|EQ 0.085 . PKNH_1223800 157 NREQLAK|ML 0.071 . PKNH_1223800 160 QLAKMLK|EL 0.063 . PKNH_1223800 164 MLKELLK|KK 0.063 . PKNH_1223800 165 LKELLKK|KM 0.087 . PKNH_1223800 166 KELLKKK|MN 0.112 . PKNH_1223800 170 KKKMNEK|KT 0.080 . PKNH_1223800 171 KKMNEKK|TG 0.106 . PKNH_1223800 174 NEKKTGK|KD 0.060 . PKNH_1223800 175 EKKTGKK|DP 0.101 . PKNH_1223800 186 VNGEEGK|ED 0.068 . PKNH_1223800 227 GLFFNLK|YA 0.084 . PKNH_1223800 231 NLKYASK|FF 0.060 . PKNH_1223800 234 YASKFFK|FM 0.091 . PKNH_1223800 238 FFKFMNK|YN 0.064 . PKNH_1223800 241 FMNKYNR|NY 0.119 . PKNH_1223800 244 KYNRNYK|DI 0.248 . PKNH_1223800 252 ITEQMEK|YE 0.060 . PKNH_1223800 257 EKYENFK|IN 0.062 . PKNH_1223800 262 FKINYLK|IK 0.070 . PKNH_1223800 264 INYLKIK|KH 0.066 . PKNH_1223800 265 NYLKIKK|HN 0.098 . PKNH_1223800 274 ETSQMYR|MR 0.100 . PKNH_1223800 276 SQMYRMR|LN 0.097 . PKNH_1223800 285 QFSDYSK|KD 0.060 . PKNH_1223800 286 FSDYSKK|DF 0.145 . PKNH_1223800 293 DFENYFR|KL 0.086 . PKNH_1223800 294 FENYFRK|LL 0.077 . PKNH_1223800 303 PIPDHLK|KK 0.059 . PKNH_1223800 304 IPDHLKK|KY 0.089 . PKNH_1223800 305 PDHLKKK|YV 0.171 . PKNH_1223800 317 ASLNNVK|GK 0.059 . PKNH_1223800 319 LNNVKGK|MV 0.129 . PKNH_1223800 325 KMVDSNK|SA 0.100 . PKNH_1223800 340 PEILDYR|EK 0.081 . PKNH_1223800 342 ILDYREK|GI 0.068 . PKNH_1223800 349 GIVHEPK|DQ 0.093 . PKNH_1223800 372 VECIYAK|EH 0.064 . PKNH_1223800 376 YAKEHDK|TI 0.062 . PKNH_1223800 391 EIVDCSK|LN 0.062 . PKNH_1223800 420 CLGADYK|YI 0.061 . PKNH_1223800 433 LFCLNYR|CK 0.087 . PKNH_1223800 435 CLNYRCK|NK 0.064 . PKNH_1223800 437 NYRCKNK|IT 0.068 . PKNH_1223800 447 SSVGGVK|EN 0.063 . PKNH_1223800 453 KENELIR|AL 0.115 . PKNH_1223800 503 GQVQTSK|IF 0.060 . PKNH_1223800 519 DANGLTK|KG 0.060 . PKNH_1223800 520 ANGLTKK|GA 0.152 . PKNH_1223800 528 AIASPSK|AN 0.074 . PKNH_1223800 541 QYYWIIK|NS 0.058 . PKNH_1223800 546 IKNSWSK|YW 0.101 . PKNH_1223800 555 GENGFMR|LS 0.116 . PKNH_1223800 558 GFMRLSR|NK 0.249 . PKNH_1223800 560 MRLSRNK|EG 0.069 . ____________________________^_________________

  • Fasta :-

    >PKNH_1223800 ATGGCGCAGAATATGAGCATCATGAACCTGACCAAGTCCAGCTTGGAGGCCCTGAACAGA AACCAAATGCTCTCCAAAAGGAGGAATAGGAAAATTTTGAAGATATGCATATACATAGTT CTGACATTTGTGATGTGCGGTGTAGTGTTCGTATGCTTCACTACGATATCGAGAAATGAT TGGAGCCTTAACCGAAGCGACAATCTGAAAGATTCTTCTTTCAACTCTGGTGATGGAGAT ATCCTCAACAAGGCTGAAATAGAAACTCTGAAATTTATCTTTTCAAAATACCCTCAAGGG AAGAAGGATCTATCTGGTGATGAAGTAGAAGCACTAGCAGATGCCGCCATATCTAATGAA GAGGATGAGAAGATAAAAATTGAAGAGCCAGGAAAGCACATCAAATTAATGAAGAAGTAT AATGAAGTTGTGGCGGACCTCAGTCAAGAAAACAGAGAGCAGTTAGCAAAAATGTTAAAG GAACTTTTGAAAAAAAAAATGAATGAGAAGAAAACAGGAAAAAAAGACCCCAATAGTGTT AATGGTGAGGAAGGGAAAGAAGATATCAATGGCGGTTTGTCCAATTTTAATTTCGATAGT GTCGGGGCCAATGAAGATGATAATGGCGGAGACGCAGTGTTGAGTGAGGAGCACATCGAA GGTCTCTTCTTCAACCTGAAATACGCGTCGAAATTTTTTAAGTTCATGAACAAGTATAAC AGAAACTATAAAGACATCACTGAGCAGATGGAGAAATATGAAAATTTCAAAATTAACTAT CTCAAAATAAAAAAACACAACGAAACAAGCCAAATGTACAGAATGAGGTTAAACCAGTTT AGTGACTATTCGAAAAAAGATTTTGAAAATTATTTTAGAAAATTACTTCCCATCCCAGAT CACTTGAAGAAGAAATATGTAGTGCCTTTTGCTTCTTTGAATAACGTAAAAGGTAAAATG GTGGATAGCAACAAAAGTGCAGACATTTTCACTGACGTCCCAGAAATTTTGGACTATAGA GAAAAAGGAATTGTACATGAACCGAAGGATCAAGGATTATGTGGTTCGTGTTGGGCATTT GCTAGTGTAGGAAATGTTGAATGTATATATGCCAAGGAACACGATAAAACCATTTTAACA CTGAGCGAACAAGAAATTGTGGATTGTTCAAAATTAAATTTCGGATGTGATGGTGGACAT CCATTTTATTCATTCATCTATGCCATCGAAAATGGAATCTGCTTAGGGGCCGATTATAAA TACATAGCTATGGATAATTTATTTTGCCTAAATTATAGATGTAAGAATAAAATTACCCTC TCCTCTGTTGGTGGCGTGAAAGAAAACGAATTGATACGGGCATTAAATGAAGTAGGTCCC GTGTCTGTTAATGTAGGTGTAACGGATGATTTCTCCTTTTACGATGGAGGAATATTCAAC GGTACATGTACAGAAGAATTAAACCACTCTGTTCTTCTTGTCGGTTATGGCCAAGTACAA ACCAGCAAAATCTTTCAACAAAATAATATTTATGATGATGCCAATGGACTAACGAAAAAG GGAGCGATAGCCTCTCCATCAAAGGCCAATGATGATGGTATTCAGTACTACTGGATTATC AAAAATTCGTGGAGTAAGTACTGGGGAGAAAATGGATTCATGAGACTTAGTCGAAACAAG GAAGGAGACAACGTATTTTGCGGAATTGGTGTCGAGGTTTTCTACCCCATTTTGTAA
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  • Fasta :-

    MAQNMSIMNLTKSSLEALNRNQMLSKRRNRKILKICIYIVLTFVMCGVVFVCFTTISRND WSLNRSDNLKDSSFNSGDGDILNKAEIETLKFIFSKYPQGKKDLSGDEVEALADAAISNE EDEKIKIEEPGKHIKLMKKYNEVVADLSQENREQLAKMLKELLKKKMNEKKTGKKDPNSV NGEEGKEDINGGLSNFNFDSVGANEDDNGGDAVLSEEHIEGLFFNLKYASKFFKFMNKYN RNYKDITEQMEKYENFKINYLKIKKHNETSQMYRMRLNQFSDYSKKDFENYFRKLLPIPD HLKKKYVVPFASLNNVKGKMVDSNKSADIFTDVPEILDYREKGIVHEPKDQGLCGSCWAF ASVGNVECIYAKEHDKTILTLSEQEIVDCSKLNFGCDGGHPFYSFIYAIENGICLGADYK YIAMDNLFCLNYRCKNKITLSSVGGVKENELIRALNEVGPVSVNVGVTDDFSFYDGGIFN GTCTEELNHSVLLVGYGQVQTSKIFQQNNIYDDANGLTKKGAIASPSKANDDGIQYYWII KNSWSKYWGENGFMRLSRNKEGDNVFCGIGVEVFYPIL

  • title: active site
  • coordinates: Q351,C357,H489,N542
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PKNH_1223800118 SDAAISNEED0.995unspPKNH_1223800118 SDAAISNEED0.995unspPKNH_1223800118 SDAAISNEED0.995unspPKNH_1223800284 SFSDYSKKDF0.996unspPKNH_122380025 SNQMLSKRRN0.994unspPKNH_1223800105 SKKDLSGDEV0.993unsp

PK14_2630c      PKH_124810      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India