PKNH_1227700 | aminopeptidase P, putative

_IDPredictionOTHERSPmTPCS_Position
PKNH_1227700SP0.4481490.5480920.003760CS pos: 26-27. GTR-VN. Pr: 0.2131
No Results

  • Fasta :-

    >PKNH_1227700 MRMNSLFYAFFCLMVFHLNIFYKGTRVNYVSAYISSIHKYTNYGNVGSNIGNNEGNNGGH NNPNKIDNHKISANETSNRSAASYFKKKFPQIYQQNGASVPSAVGDSTQTSEKKEFERTS QLQQEAEEPRQQLQESDNLEEDKDNMAAPIEERLANLKKVMQENNIDVYILINSDEHNSE IINDKDKKIYFLSNYSGADGILILTKDKQILYVNALYELQANKELNHDIFTLRVSRITNR DEIYETIASLEFNNIAVDGKNTSVNFYEKLKGKIESTYPEKKVEEKVIYGKNMNQIEKNE NINFLILEKSLVELKQNEVNNKQVFIHDRLYNGACAGQKLEKFRQAFSFDKKNVDKILLS ELDEIAYILNLRGFDYTFSPLFYGYLYFEFNREKDEFGKMILFTVSKNLSPSSIRHLNTI KVDVKEYETVVEYLRDNVSSKTMALTKAGNETSAVHTNLSEEFDSQKKYEISLSPYINLM IYMLFNKEKILLEKSPVVDLKAVKNDVEIDNMKEAHVLDALALLQFFHWCDEKRKTKELF NETEMSLKNKVDYFRSTKSNFISPSFATISASGPNAAVIHYEVTESTNSKITPSIYLLDS GGQYLHGTTDVTRTTHFGEPTAEEKKIYTLVLKGHLHLRKVIFASYTNSMALDFIARENL FKHFLDYNHGTGHGVGLFLNVHEGGCSIGPTAGTPLKPYMVLSNEPGFYLENKFGVRIEN MQFVISKKKTDNTEFYSFEDLTLYPYEKKLLDYSILTTEEIKDINEYHDNIRKTLLPRLK KNPSEYGEGVVKYLMDITQPISIN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_1227700.fa Sequence name : PKNH_1227700 Sequence length : 804 VALUES OF COMPUTED PARAMETERS Coef20 : 4.679 CoefTot : -2.240 ChDiff : -12 ZoneTo : 53 KR : 4 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.865 1.853 0.190 0.746 MesoH : -0.337 0.191 -0.395 0.242 MuHd_075 : 23.035 18.686 8.178 5.633 MuHd_095 : 23.876 15.368 6.775 5.027 MuHd_100 : 27.708 21.221 10.539 6.699 MuHd_105 : 31.376 23.563 11.781 7.429 Hmax_075 : 22.867 2.800 -1.031 8.400 Hmax_095 : 14.175 10.000 -1.016 5.154 Hmax_100 : 17.800 15.000 0.863 5.690 Hmax_105 : 9.917 18.550 2.375 5.250 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.4701 0.5299 DFMC : 0.4348 0.5652 This protein is probably imported in mitochondria. f(Ser) = 0.0943 f(Arg) = 0.0377 CMi = 0.76805 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 804 PKNH_1227700 MRMNSLFYAFFCLMVFHLNIFYKGTRVNYVSAYISSIHKYTNYGNVGSNIGNNEGNNGGHNNPNKIDNHKISANETSNRS 80 AASYFKKKFPQIYQQNGASVPSAVGDSTQTSEKKEFERTSQLQQEAEEPRQQLQESDNLEEDKDNMAAPIEERLANLKKV 160 MQENNIDVYILINSDEHNSEIINDKDKKIYFLSNYSGADGILILTKDKQILYVNALYELQANKELNHDIFTLRVSRITNR 240 DEIYETIASLEFNNIAVDGKNTSVNFYEKLKGKIESTYPEKKVEEKVIYGKNMNQIEKNENINFLILEKSLVELKQNEVN 320 NKQVFIHDRLYNGACAGQKLEKFRQAFSFDKKNVDKILLSELDEIAYILNLRGFDYTFSPLFYGYLYFEFNREKDEFGKM 400 ILFTVSKNLSPSSIRHLNTIKVDVKEYETVVEYLRDNVSSKTMALTKAGNETSAVHTNLSEEFDSQKKYEISLSPYINLM 480 IYMLFNKEKILLEKSPVVDLKAVKNDVEIDNMKEAHVLDALALLQFFHWCDEKRKTKELFNETEMSLKNKVDYFRSTKSN 560 FISPSFATISASGPNAAVIHYEVTESTNSKITPSIYLLDSGGQYLHGTTDVTRTTHFGEPTAEEKKIYTLVLKGHLHLRK 640 VIFASYTNSMALDFIARENLFKHFLDYNHGTGHGVGLFLNVHEGGCSIGPTAGTPLKPYMVLSNEPGFYLENKFGVRIEN 720 MQFVISKKKTDNTEFYSFEDLTLYPYEKKLLDYSILTTEEIKDINEYHDNIRKTLLPRLKKNPSEYGEGVVKYLMDITQP 800 ISIN 880 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 .... 880 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_1227700 2 -----MR|MN 0.092 . PKNH_1227700 23 HLNIFYK|GT 0.086 . PKNH_1227700 26 IFYKGTR|VN 0.072 . PKNH_1227700 39 YISSIHK|YT 0.074 . PKNH_1227700 65 GHNNPNK|ID 0.076 . PKNH_1227700 70 NKIDNHK|IS 0.061 . PKNH_1227700 79 ANETSNR|SA 0.153 . PKNH_1227700 86 SAASYFK|KK 0.073 . PKNH_1227700 87 AASYFKK|KF 0.150 . PKNH_1227700 88 ASYFKKK|FP 0.133 . PKNH_1227700 113 STQTSEK|KE 0.061 . PKNH_1227700 114 TQTSEKK|EF 0.085 . PKNH_1227700 118 EKKEFER|TS 0.090 . PKNH_1227700 130 QEAEEPR|QQ 0.088 . PKNH_1227700 143 DNLEEDK|DN 0.073 . PKNH_1227700 153 AAPIEER|LA 0.082 . PKNH_1227700 158 ERLANLK|KV 0.073 . PKNH_1227700 159 RLANLKK|VM 0.090 . PKNH_1227700 185 SEIINDK|DK 0.070 . PKNH_1227700 187 IINDKDK|KI 0.066 . PKNH_1227700 188 INDKDKK|IY 0.093 . PKNH_1227700 206 GILILTK|DK 0.063 . PKNH_1227700 208 LILTKDK|QI 0.059 . PKNH_1227700 223 YELQANK|EL 0.060 . PKNH_1227700 233 HDIFTLR|VS 0.077 . PKNH_1227700 236 FTLRVSR|IT 0.162 . PKNH_1227700 240 VSRITNR|DE 0.098 . PKNH_1227700 260 NIAVDGK|NT 0.071 . PKNH_1227700 269 SVNFYEK|LK 0.092 . PKNH_1227700 271 NFYEKLK|GK 0.061 . PKNH_1227700 273 YEKLKGK|IE 0.067 . PKNH_1227700 281 ESTYPEK|KV 0.073 . PKNH_1227700 282 STYPEKK|VE 0.107 . PKNH_1227700 286 EKKVEEK|VI 0.069 . PKNH_1227700 291 EKVIYGK|NM 0.072 . PKNH_1227700 298 NMNQIEK|NE 0.060 . PKNH_1227700 309 NFLILEK|SL 0.060 . PKNH_1227700 315 KSLVELK|QN 0.064 . PKNH_1227700 322 QNEVNNK|QV 0.082 . PKNH_1227700 329 QVFIHDR|LY 0.094 . PKNH_1227700 339 GACAGQK|LE 0.053 . PKNH_1227700 342 AGQKLEK|FR 0.062 . PKNH_1227700 344 QKLEKFR|QA 0.109 . PKNH_1227700 351 QAFSFDK|KN 0.060 . PKNH_1227700 352 AFSFDKK|NV 0.246 . PKNH_1227700 356 DKKNVDK|IL 0.069 . PKNH_1227700 372 AYILNLR|GF 0.074 . PKNH_1227700 392 LYFEFNR|EK 0.089 . PKNH_1227700 394 FEFNREK|DE 0.065 . PKNH_1227700 399 EKDEFGK|MI 0.059 . PKNH_1227700 407 ILFTVSK|NL 0.064 . PKNH_1227700 415 LSPSSIR|HL 0.098 . PKNH_1227700 421 RHLNTIK|VD 0.058 . PKNH_1227700 425 TIKVDVK|EY 0.072 . PKNH_1227700 435 TVVEYLR|DN 0.081 . PKNH_1227700 441 RDNVSSK|TM 0.062 . PKNH_1227700 447 KTMALTK|AG 0.058 . PKNH_1227700 467 EEFDSQK|KY 0.068 . PKNH_1227700 468 EFDSQKK|YE 0.070 . PKNH_1227700 487 IYMLFNK|EK 0.059 . PKNH_1227700 489 MLFNKEK|IL 0.072 . PKNH_1227700 494 EKILLEK|SP 0.071 . PKNH_1227700 501 SPVVDLK|AV 0.083 . PKNH_1227700 504 VDLKAVK|ND 0.057 . PKNH_1227700 513 VEIDNMK|EA 0.065 . PKNH_1227700 533 FHWCDEK|RK 0.060 . PKNH_1227700 534 HWCDEKR|KT 0.178 . PKNH_1227700 535 WCDEKRK|TK 0.079 . PKNH_1227700 537 DEKRKTK|EL 0.160 . PKNH_1227700 548 ETEMSLK|NK 0.059 . PKNH_1227700 550 EMSLKNK|VD 0.061 . PKNH_1227700 555 NKVDYFR|ST 0.127 . PKNH_1227700 558 DYFRSTK|SN 0.157 . PKNH_1227700 590 TESTNSK|IT 0.068 . PKNH_1227700 613 GTTDVTR|TT 0.117 . PKNH_1227700 625 EPTAEEK|KI 0.061 . PKNH_1227700 626 PTAEEKK|IY 0.094 . PKNH_1227700 633 IYTLVLK|GH 0.056 . PKNH_1227700 639 KGHLHLR|KV 0.117 . PKNH_1227700 640 GHLHLRK|VI 0.087 . PKNH_1227700 657 ALDFIAR|EN 0.069 . PKNH_1227700 662 ARENLFK|HF 0.075 . PKNH_1227700 697 TAGTPLK|PY 0.061 . PKNH_1227700 713 GFYLENK|FG 0.079 . PKNH_1227700 717 ENKFGVR|IE 0.075 . PKNH_1227700 727 MQFVISK|KK 0.065 . PKNH_1227700 728 QFVISKK|KT 0.116 . PKNH_1227700 729 FVISKKK|TD 0.096 . PKNH_1227700 748 TLYPYEK|KL 0.058 . PKNH_1227700 749 LYPYEKK|LL 0.090 . PKNH_1227700 762 LTTEEIK|DI 0.068 . PKNH_1227700 772 EYHDNIR|KT 0.066 . PKNH_1227700 773 YHDNIRK|TL 0.065 . PKNH_1227700 778 RKTLLPR|LK 0.066 . PKNH_1227700 780 TLLPRLK|KN 0.058 . PKNH_1227700 781 LLPRLKK|NP 0.274 . PKNH_1227700 792 YGEGVVK|YL 0.070 . ____________________________^_________________

  • Fasta :-

    >PKNH_1227700 ATGCGTATGAATTCCCTCTTTTACGCCTTTTTTTGTTTAATGGTATTCCATTTAAACATT TTTTACAAGGGAACAAGGGTTAACTACGTTTCTGCCTACATCAGCTCCATCCACAAGTAC ACGAATTACGGCAACGTAGGAAGTAACATAGGAAACAACGAAGGCAATAACGGAGGCCAT AATAACCCTAATAAGATCGACAATCACAAAATAAGCGCCAACGAAACATCTAACAGATCA GCTGCCTCATACTTCAAGAAAAAGTTCCCACAAATTTATCAGCAGAACGGTGCAAGCGTC CCCAGCGCGGTGGGAGATTCTACACAGACTAGCGAGAAGAAGGAATTTGAGAGAACCTCG CAACTGCAGCAGGAGGCAGAGGAACCTAGGCAACAGCTACAAGAAAGTGACAATCTTGAA GAAGATAAAGACAACATGGCAGCTCCCATAGAAGAGAGACTTGCAAACCTGAAGAAGGTG ATGCAAGAAAATAACATCGATGTGTACATCCTAATAAATAGCGATGAACACAATTCAGAA ATAATAAACGACAAGGACAAGAAAATATATTTCCTGAGCAACTACAGTGGAGCTGACGGT ATCCTAATACTCACCAAGGACAAGCAAATTCTATACGTGAATGCACTGTACGAATTACAA GCAAACAAAGAATTAAACCACGACATCTTCACCTTACGAGTTAGCAGAATTACCAACCGA GATGAAATATACGAAACAATTGCATCCCTTGAATTTAACAATATTGCTGTGGATGGAAAA AACACCAGTGTCAATTTTTATGAAAAACTAAAGGGAAAAATAGAGTCCACTTATCCAGAA AAAAAAGTGGAAGAAAAAGTTATTTACGGAAAAAATATGAACCAAATTGAAAAAAATGAA AATATAAACTTCCTAATTTTAGAAAAATCCTTAGTAGAATTAAAACAAAATGAAGTGAAT AACAAGCAGGTCTTTATACATGACAGATTATATAACGGTGCATGTGCAGGACAGAAATTA GAAAAATTTAGACAAGCATTTTCCTTCGACAAGAAAAATGTCGATAAAATATTACTCTCA GAGTTAGACGAGATTGCTTATATTTTAAACCTACGTGGATTTGACTACACATTTTCACCT CTGTTCTATGGATATCTCTACTTCGAGTTCAATAGGGAAAAGGACGAATTTGGAAAAATG ATTCTTTTCACTGTATCGAAGAACCTCTCCCCAAGTTCCATTAGACACCTCAACACAATT AAAGTGGATGTGAAGGAGTACGAAACCGTAGTTGAATACCTAAGGGACAATGTCTCGTCG AAAACGATGGCACTCACCAAGGCAGGCAATGAAACAAGCGCAGTTCATACGAACCTCTCC GAAGAATTTGATTCTCAGAAAAAATACGAAATTTCCTTAAGCCCATATATCAACCTAATG ATATATATGCTTTTTAATAAAGAAAAAATATTGCTGGAAAAATCTCCCGTTGTTGACTTA AAGGCAGTTAAGAACGACGTCGAAATAGATAACATGAAAGAGGCACATGTGCTAGATGCA TTGGCACTTTTACAATTTTTTCACTGGTGTGATGAGAAGAGAAAAACTAAAGAGTTATTT AACGAAACAGAAATGTCCTTAAAAAATAAAGTAGATTATTTCAGATCCACCAAATCAAAC TTTATCTCCCCTTCCTTTGCAACCATTTCGGCCAGCGGACCAAATGCTGCAGTTATTCAC TACGAAGTTACTGAATCTACAAATTCGAAAATCACGCCAAGTATATATCTCCTTGATTCA GGAGGACAATACTTACACGGAACCACAGATGTAACTAGAACCACACACTTTGGAGAACCC ACAGCGGAAGAAAAGAAAATCTACACCCTAGTACTTAAAGGACACCTACATTTAAGGAAG GTTATATTTGCCAGCTACACGAATTCTATGGCCCTAGATTTTATTGCACGAGAAAATTTA TTCAAACACTTCCTTGATTATAATCATGGAACTGGACATGGAGTAGGATTATTCTTAAAT GTCCATGAAGGTGGATGCTCCATAGGACCAACAGCTGGCACTCCACTGAAACCTTATATG GTACTTTCGAACGAACCCGGATTCTACCTTGAAAATAAATTTGGTGTCAGAATCGAAAAC ATGCAATTTGTAATTAGCAAGAAGAAAACAGACAACACAGAGTTCTACTCCTTCGAAGAT TTAACTCTCTATCCGTATGAAAAGAAATTACTTGATTATTCTATATTGACGACTGAAGAA ATTAAGGACATCAATGAATACCACGACAACATTAGGAAAACACTCCTCCCCCGATTGAAG AAGAACCCCTCTGAATACGGAGAAGGAGTAGTCAAGTACCTCATGGATATCACCCAACCG ATTTCGATCAACTAG
  • Download Fasta

  • Fasta :-

    MRMNSLFYAFFCLMVFHLNIFYKGTRVNYVSAYISSIHKYTNYGNVGSNIGNNEGNNGGH NNPNKIDNHKISANETSNRSAASYFKKKFPQIYQQNGASVPSAVGDSTQTSEKKEFERTS QLQQEAEEPRQQLQESDNLEEDKDNMAAPIEERLANLKKVMQENNIDVYILINSDEHNSE IINDKDKKIYFLSNYSGADGILILTKDKQILYVNALYELQANKELNHDIFTLRVSRITNR DEIYETIASLEFNNIAVDGKNTSVNFYEKLKGKIESTYPEKKVEEKVIYGKNMNQIEKNE NINFLILEKSLVELKQNEVNNKQVFIHDRLYNGACAGQKLEKFRQAFSFDKKNVDKILLS ELDEIAYILNLRGFDYTFSPLFYGYLYFEFNREKDEFGKMILFTVSKNLSPSSIRHLNTI KVDVKEYETVVEYLRDNVSSKTMALTKAGNETSAVHTNLSEEFDSQKKYEISLSPYINLM IYMLFNKEKILLEKSPVVDLKAVKNDVEIDNMKEAHVLDALALLQFFHWCDEKRKTKELF NETEMSLKNKVDYFRSTKSNFISPSFATISASGPNAAVIHYEVTESTNSKITPSIYLLDS GGQYLHGTTDVTRTTHFGEPTAEEKKIYTLVLKGHLHLRKVIFASYTNSMALDFIARENL FKHFLDYNHGTGHGVGLFLNVHEGGCSIGPTAGTPLKPYMVLSNEPGFYLENKFGVRIEN MQFVISKKKTDNTEFYSFEDLTLYPYEKKLLDYSILTTEEIKDINEYHDNIRKTLLPRLK KNPSEYGEGVVKYLMDITQPISIN

  • title: active site
  • coordinates: H580,D599,D610,L677,E705,E719
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PKNH_1227700111 SSTQTSEKKE0.995unspPKNH_1227700726 SQFVISKKKT0.994unsp

PK14_2445w      PKH_125210      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India