PKNH_1229800 | DER1-like protein, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0020011      

  • Curated_GO_Components:  apicoplast      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:  ubiquitin-dependent ERAD pathway      

_IDPredictionOTHERSPmTPCS_Position
PKNH_1229800SP0.0411760.9586890.000135CS pos: 21-22. SKG-NV. Pr: 0.6646
No Results

  • Fasta :-

    >PKNH_1229800 MNIVLCLFWILIYIADDGSKGNVQCKRQNEVSKAKKIYSYSLLESKPQDRYAHHRNFVLY KRRALFHIRIPRKNLERQNLFSNDLRYKKINKFLENKKANKLCYLHINNNNHGIKKKRKK NKTLQLFFEKKKLLQEYFLNLKSSFMDRYRNTKIITKLFLSSSLLMLTLNLIGLKPEDIA LHDKRIIRAFEFYRIVTSALFYGDISLYVLTNVYMLYVQSQELERSVGSSETLAFYLSQI SILSVICSYLKKPFYSTALLKSLLFVNCMLNPYQKSNLIFGINIYNIYLPYFSILIDILH AQNLKASLSGILGVTSGSIYYLLNIYAYQKFNKKFFLIPRFLRNYLDSLNIDDVL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_1229800.fa Sequence name : PKNH_1229800 Sequence length : 355 VALUES OF COMPUTED PARAMETERS Coef20 : 4.097 CoefTot : 0.216 ChDiff : 31 ZoneTo : 15 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.871 1.918 0.308 0.687 MesoH : 0.373 0.851 -0.124 0.401 MuHd_075 : 21.086 9.464 4.817 3.592 MuHd_095 : 21.281 19.392 7.314 4.306 MuHd_100 : 25.820 21.074 7.260 5.214 MuHd_105 : 22.935 18.204 5.206 4.672 Hmax_075 : 18.667 22.167 5.570 7.502 Hmax_095 : 19.700 25.400 5.593 7.920 Hmax_100 : 20.000 24.900 5.040 7.980 Hmax_105 : 19.400 21.800 3.661 7.020 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9145 0.0855 DFMC : 0.9211 0.0789
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 355 PKNH_1229800 MNIVLCLFWILIYIADDGSKGNVQCKRQNEVSKAKKIYSYSLLESKPQDRYAHHRNFVLYKRRALFHIRIPRKNLERQNL 80 FSNDLRYKKINKFLENKKANKLCYLHINNNNHGIKKKRKKNKTLQLFFEKKKLLQEYFLNLKSSFMDRYRNTKIITKLFL 160 SSSLLMLTLNLIGLKPEDIALHDKRIIRAFEFYRIVTSALFYGDISLYVLTNVYMLYVQSQELERSVGSSETLAFYLSQI 240 SILSVICSYLKKPFYSTALLKSLLFVNCMLNPYQKSNLIFGINIYNIYLPYFSILIDILHAQNLKASLSGILGVTSGSIY 320 YLLNIYAYQKFNKKFFLIPRFLRNYLDSLNIDDVL 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_1229800 20 IADDGSK|GN 0.061 . PKNH_1229800 26 KGNVQCK|RQ 0.068 . PKNH_1229800 27 GNVQCKR|QN 0.194 . PKNH_1229800 33 RQNEVSK|AK 0.070 . PKNH_1229800 35 NEVSKAK|KI 0.065 . PKNH_1229800 36 EVSKAKK|IY 0.131 . PKNH_1229800 46 YSLLESK|PQ 0.059 . PKNH_1229800 50 ESKPQDR|YA 0.118 . PKNH_1229800 55 DRYAHHR|NF 0.091 . PKNH_1229800 61 RNFVLYK|RR 0.057 . PKNH_1229800 62 NFVLYKR|RA 0.125 . PKNH_1229800 63 FVLYKRR|AL 0.137 . PKNH_1229800 69 RALFHIR|IP 0.085 . PKNH_1229800 72 FHIRIPR|KN 0.165 . PKNH_1229800 73 HIRIPRK|NL 0.098 . PKNH_1229800 77 PRKNLER|QN 0.080 . PKNH_1229800 86 LFSNDLR|YK 0.089 . PKNH_1229800 88 SNDLRYK|KI 0.069 . PKNH_1229800 89 NDLRYKK|IN 0.170 . PKNH_1229800 92 RYKKINK|FL 0.071 . PKNH_1229800 97 NKFLENK|KA 0.060 . PKNH_1229800 98 KFLENKK|AN 0.073 . PKNH_1229800 101 ENKKANK|LC 0.058 . PKNH_1229800 115 NNNHGIK|KK 0.072 . PKNH_1229800 116 NNHGIKK|KR 0.090 . PKNH_1229800 117 NHGIKKK|RK 0.104 . PKNH_1229800 118 HGIKKKR|KK 0.232 . PKNH_1229800 119 GIKKKRK|KN 0.099 . PKNH_1229800 120 IKKKRKK|NK 0.131 . PKNH_1229800 122 KKRKKNK|TL 0.080 . PKNH_1229800 130 LQLFFEK|KK 0.057 . PKNH_1229800 131 QLFFEKK|KL 0.092 . PKNH_1229800 132 LFFEKKK|LL 0.091 . PKNH_1229800 142 EYFLNLK|SS 0.059 . PKNH_1229800 148 KSSFMDR|YR 0.133 . PKNH_1229800 150 SFMDRYR|NT 0.097 . PKNH_1229800 153 DRYRNTK|II 0.156 . PKNH_1229800 157 NTKIITK|LF 0.052 . PKNH_1229800 175 LNLIGLK|PE 0.064 . PKNH_1229800 184 DIALHDK|RI 0.067 . PKNH_1229800 185 IALHDKR|II 0.227 . PKNH_1229800 188 HDKRIIR|AF 0.256 . PKNH_1229800 194 RAFEFYR|IV 0.131 . PKNH_1229800 225 QSQELER|SV 0.281 . PKNH_1229800 251 VICSYLK|KP 0.053 . PKNH_1229800 252 ICSYLKK|PF 0.087 . PKNH_1229800 261 YSTALLK|SL 0.075 . PKNH_1229800 275 MLNPYQK|SN 0.078 . PKNH_1229800 305 LHAQNLK|AS 0.061 . PKNH_1229800 330 NIYAYQK|FN 0.060 . PKNH_1229800 333 AYQKFNK|KF 0.066 . PKNH_1229800 334 YQKFNKK|FF 0.080 . PKNH_1229800 340 KFFLIPR|FL 0.112 . PKNH_1229800 343 LIPRFLR|NY 0.205 . ____________________________^_________________

  • Fasta :-

    >PKNH_1229800 ATGAACATTGTGTTGTGCCTATTTTGGATCCTTATATACATAGCTGATGATGGAAGTAAG GGAAATGTGCAATGCAAAAGACAGAATGAAGTAAGCAAAGCGAAGAAGATCTACTCGTAC AGCCTATTGGAGAGTAAACCACAGGACCGATATGCACACCATCGAAATTTTGTACTTTAT AAGAGACGAGCTCTGTTCCATATACGCATCCCTAGGAAGAACCTGGAGAGGCAAAACCTA TTCAGCAATGATCTCCGCTATAAAAAAATTAACAAATTTTTGGAGAATAAAAAGGCAAAC AAGTTGTGTTATTTACATATAAATAATAACAATCATGGAATAAAAAAAAAGAGGAAAAAA AACAAAACATTGCAACTGTTTTTTGAAAAAAAAAAGTTGCTGCAAGAATATTTTCTCAAC TTAAAATCATCCTTTATGGATAGGTATAGAAACACAAAAATTATAACTAAGCTTTTTTTA TCGTCCTCTTTGCTGATGCTAACCCTTAACCTCATTGGATTAAAACCAGAAGACATTGCT CTACACGATAAAAGAATAATCAGGGCATTTGAATTTTACAGAATTGTAACATCAGCACTC TTTTATGGTGACATATCATTATATGTGTTAACAAATGTTTATATGTTATATGTGCAGAGT CAGGAGTTGGAAAGGTCGGTGGGCTCATCAGAAACACTAGCTTTTTATTTGTCACAAATT TCTATCCTCTCGGTAATTTGTTCCTACTTAAAGAAGCCCTTCTACTCAACAGCACTGCTG AAATCGCTACTCTTTGTAAACTGTATGCTAAATCCTTATCAGAAATCTAACTTAATTTTT GGGATAAATATTTACAATATATACTTACCTTATTTCTCCATCTTGATTGATATTTTGCAT GCACAAAATTTGAAAGCTTCCTTGTCGGGGATACTGGGCGTGACCAGTGGGTCCATTTAC TACCTTCTGAATATTTACGCGTATCAAAAATTCAACAAAAAGTTTTTCCTAATTCCGCGC TTCTTGAGGAATTATCTCGATTCGCTTAACATAGACGATGTGTTATAA
  • Download Fasta

  • Fasta :-

    MNIVLCLFWILIYIADDGSKGNVQCKRQNEVSKAKKIYSYSLLESKPQDRYAHHRNFVLY KRRALFHIRIPRKNLERQNLFSNDLRYKKINKFLENKKANKLCYLHINNNNHGIKKKRKK NKTLQLFFEKKKLLQEYFLNLKSSFMDRYRNTKIITKLFLSSSLLMLTLNLIGLKPEDIA LHDKRIIRAFEFYRIVTSALFYGDISLYVLTNVYMLYVQSQELERSVGSSETLAFYLSQI SILSVICSYLKKPFYSTALLKSLLFVNCMLNPYQKSNLIFGINIYNIYLPYFSILIDILH AQNLKASLSGILGVTSGSIYYLLNIYAYQKFNKKFFLIPRFLRNYLDSLNIDDVL

    No Results
No Results
No Results
No Results

PK14_2350c      PKH_125400      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India