PKNH_1236000 | M17 leucyl aminopeptidase, putative

_IDPredictionOTHERSPmTPCS_Position
PKNH_1236000OTHER0.9116620.0000340.088304
No Results

  • Fasta :-

    >PKNH_1236000 MHLLKLSPQIKNTYWNIPQKNFRTSLTQFGERKKNRILHLYPTCKSESRDRKLPFFESQR FSTINNKKEIRKMATIVPQVVSLDPTTIPIDYHTPIDDLNIEVKDINKEACPADEGLIVF LLNSAPKDNSKSDKGESSGAIKINSNMNDKTINEFLKEGNMENFTGKVGTSKSFYVANEK KKYISLAYVGCGPANEETELEIRKIAYTLATLLHENKNKKVSIVFELKLEENLFRFFLEH LFYEYVTDERFKSADKSTNIDYIKSLSLYMANADIYKGQVDKARVYFYGTYYAAQLIAAP SNYCNPVSLSNAAVELAQKVNLECKILDVKELEDLKMGAYLSVGKGSMYPNKFIHLTYKG AKKGDKGNTKKKIALIGKGITFDSGGYNLKAAPGSMIDLMKFDMSGCAAVLGCAYCIGTM RPDNVEVHFLSAVCENMVSKNSYRPGDIITASNGKTIEVGNTDAEGRLTLADALVYAEKL GVDYIVDIATLTGAMLYSLGTSYAGVFGNNDQLINKILNSSKTSNEPAWWLPIINEYRSS LNSKYADLNNISSSVKASSVVASLFLKEFIEKTPWAHIDIAGVSWNFKARKPKGFGVRLL TEFVLNDAV
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_1236000.fa Sequence name : PKNH_1236000 Sequence length : 609 VALUES OF COMPUTED PARAMETERS Coef20 : 3.408 CoefTot : -2.240 ChDiff : 10 ZoneTo : 46 KR : 9 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.776 1.482 0.512 0.559 MesoH : -0.297 0.438 -0.237 0.260 MuHd_075 : 24.010 15.789 7.405 6.148 MuHd_095 : 39.645 25.303 10.822 8.924 MuHd_100 : 31.830 26.598 11.538 7.601 MuHd_105 : 31.604 29.703 13.084 7.395 Hmax_075 : 2.100 4.317 -1.221 3.103 Hmax_095 : 13.500 5.700 2.268 2.555 Hmax_100 : 11.800 13.800 2.600 5.200 Hmax_105 : 15.867 17.617 3.484 5.927 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.2382 0.7618 DFMC : 0.3536 0.6464 This protein is probably imported in mitochondria. f(Ser) = 0.0652 f(Arg) = 0.0652 CMi = 0.40431 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 609 PKNH_1236000 MHLLKLSPQIKNTYWNIPQKNFRTSLTQFGERKKNRILHLYPTCKSESRDRKLPFFESQRFSTINNKKEIRKMATIVPQV 80 VSLDPTTIPIDYHTPIDDLNIEVKDINKEACPADEGLIVFLLNSAPKDNSKSDKGESSGAIKINSNMNDKTINEFLKEGN 160 MENFTGKVGTSKSFYVANEKKKYISLAYVGCGPANEETELEIRKIAYTLATLLHENKNKKVSIVFELKLEENLFRFFLEH 240 LFYEYVTDERFKSADKSTNIDYIKSLSLYMANADIYKGQVDKARVYFYGTYYAAQLIAAPSNYCNPVSLSNAAVELAQKV 320 NLECKILDVKELEDLKMGAYLSVGKGSMYPNKFIHLTYKGAKKGDKGNTKKKIALIGKGITFDSGGYNLKAAPGSMIDLM 400 KFDMSGCAAVLGCAYCIGTMRPDNVEVHFLSAVCENMVSKNSYRPGDIITASNGKTIEVGNTDAEGRLTLADALVYAEKL 480 GVDYIVDIATLTGAMLYSLGTSYAGVFGNNDQLINKILNSSKTSNEPAWWLPIINEYRSSLNSKYADLNNISSSVKASSV 560 VASLFLKEFIEKTPWAHIDIAGVSWNFKARKPKGFGVRLLTEFVLNDAV 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................. 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_1236000 5 --MHLLK|LS 0.065 . PKNH_1236000 11 KLSPQIK|NT 0.085 . PKNH_1236000 20 YWNIPQK|NF 0.081 . PKNH_1236000 23 IPQKNFR|TS 0.115 . PKNH_1236000 32 LTQFGER|KK 0.086 . PKNH_1236000 33 TQFGERK|KN 0.079 . PKNH_1236000 34 QFGERKK|NR 0.072 . PKNH_1236000 36 GERKKNR|IL 0.135 . PKNH_1236000 45 HLYPTCK|SE 0.082 . PKNH_1236000 49 TCKSESR|DR 0.079 . PKNH_1236000 51 KSESRDR|KL 0.084 . PKNH_1236000 52 SESRDRK|LP 0.192 . PKNH_1236000 60 PFFESQR|FS 0.082 . PKNH_1236000 67 FSTINNK|KE 0.058 . PKNH_1236000 68 STINNKK|EI 0.116 . PKNH_1236000 71 NNKKEIR|KM 0.099 . PKNH_1236000 72 NKKEIRK|MA 0.113 . PKNH_1236000 104 DLNIEVK|DI 0.079 . PKNH_1236000 108 EVKDINK|EA 0.067 . PKNH_1236000 127 LLNSAPK|DN 0.097 . PKNH_1236000 131 APKDNSK|SD 0.076 . PKNH_1236000 134 DNSKSDK|GE 0.090 . PKNH_1236000 142 ESSGAIK|IN 0.073 . PKNH_1236000 150 NSNMNDK|TI 0.070 . PKNH_1236000 157 TINEFLK|EG 0.070 . PKNH_1236000 167 MENFTGK|VG 0.066 . PKNH_1236000 172 GKVGTSK|SF 0.081 . PKNH_1236000 180 FYVANEK|KK 0.057 . PKNH_1236000 181 YVANEKK|KY 0.083 . PKNH_1236000 182 VANEKKK|YI 0.161 . PKNH_1236000 203 ETELEIR|KI 0.078 . PKNH_1236000 204 TELEIRK|IA 0.079 . PKNH_1236000 217 TLLHENK|NK 0.059 . PKNH_1236000 219 LHENKNK|KV 0.102 . PKNH_1236000 220 HENKNKK|VS 0.097 . PKNH_1236000 228 SIVFELK|LE 0.059 . PKNH_1236000 235 LEENLFR|FF 0.107 . PKNH_1236000 250 EYVTDER|FK 0.081 . PKNH_1236000 252 VTDERFK|SA 0.104 . PKNH_1236000 256 RFKSADK|ST 0.066 . PKNH_1236000 264 TNIDYIK|SL 0.088 . PKNH_1236000 277 ANADIYK|GQ 0.064 . PKNH_1236000 282 YKGQVDK|AR 0.059 . PKNH_1236000 284 GQVDKAR|VY 0.110 . PKNH_1236000 319 AVELAQK|VN 0.050 . PKNH_1236000 325 KVNLECK|IL 0.074 . PKNH_1236000 330 CKILDVK|EL 0.062 . PKNH_1236000 336 KELEDLK|MG 0.050 . PKNH_1236000 345 AYLSVGK|GS 0.057 . PKNH_1236000 352 GSMYPNK|FI 0.082 . PKNH_1236000 359 FIHLTYK|GA 0.090 . PKNH_1236000 362 LTYKGAK|KG 0.068 . PKNH_1236000 363 TYKGAKK|GD 0.091 . PKNH_1236000 366 GAKKGDK|GN 0.070 . PKNH_1236000 370 GDKGNTK|KK 0.064 . PKNH_1236000 371 DKGNTKK|KI 0.112 . PKNH_1236000 372 KGNTKKK|IA 0.151 . PKNH_1236000 378 KIALIGK|GI 0.066 . PKNH_1236000 390 SGGYNLK|AA 0.069 . PKNH_1236000 401 SMIDLMK|FD 0.072 . PKNH_1236000 421 YCIGTMR|PD 0.083 . PKNH_1236000 440 CENMVSK|NS 0.066 . PKNH_1236000 444 VSKNSYR|PG 0.104 . PKNH_1236000 455 ITASNGK|TI 0.071 . PKNH_1236000 467 NTDAEGR|LT 0.071 . PKNH_1236000 479 ALVYAEK|LG 0.058 . PKNH_1236000 516 NDQLINK|IL 0.061 . PKNH_1236000 522 KILNSSK|TS 0.058 . PKNH_1236000 538 PIINEYR|SS 0.101 . PKNH_1236000 544 RSSLNSK|YA 0.092 . PKNH_1236000 556 NISSSVK|AS 0.076 . PKNH_1236000 567 VASLFLK|EF 0.068 . PKNH_1236000 572 LKEFIEK|TP 0.062 . PKNH_1236000 588 GVSWNFK|AR 0.080 . PKNH_1236000 590 SWNFKAR|KP 0.114 . PKNH_1236000 591 WNFKARK|PK 0.105 . PKNH_1236000 593 FKARKPK|GF 0.305 . PKNH_1236000 598 PKGFGVR|LL 0.083 . ____________________________^_________________

  • Fasta :-

    >PKNH_1236000 ATGCATCTTTTAAAATTGTCACCACAAATCAAAAACACCTATTGGAATATTCCCCAAAAG AATTTCCGAACAAGCTTAACACAATTTGGAGAGAGAAAAAAAAATCGCATTTTGCATTTA TATCCAACTTGTAAAAGTGAGAGTCGTGATAGAAAGCTCCCATTTTTTGAGAGTCAAAGA TTTAGTACCATTAACAACAAAAAAGAGATTAGGAAAATGGCGACCATAGTGCCACAGGTA GTGTCCCTGGACCCAACGACCATACCCATAGATTATCACACCCCCATAGATGACTTAAAC ATAGAGGTAAAAGATATCAACAAGGAGGCGTGCCCCGCGGATGAGGGCCTCATCGTATTC CTCCTGAACAGTGCTCCAAAGGATAACAGCAAGAGTGATAAAGGTGAAAGTAGCGGAGCT ATCAAAATAAACTCCAACATGAACGATAAAACGATTAATGAATTTCTAAAAGAAGGAAAT ATGGAAAACTTCACAGGAAAGGTAGGAACCAGCAAAAGCTTCTACGTAGCCAATGAGAAG AAGAAGTATATCAGCCTTGCCTATGTTGGATGTGGTCCTGCGAACGAAGAAACTGAACTG GAAATTAGGAAAATAGCATACACACTAGCCACCTTGTTGCATGAAAACAAGAACAAGAAG GTTTCCATCGTTTTTGAGTTAAAATTAGAAGAAAATTTATTTAGATTTTTCCTGGAGCAT TTATTTTACGAATACGTGACGGATGAGAGATTCAAGTCCGCTGATAAGAGTACTAATATT GATTATATTAAAAGTTTATCATTGTACATGGCGAATGCTGATATTTATAAAGGACAAGTA GACAAAGCGCGTGTTTATTTTTATGGTACCTACTACGCGGCGCAATTGATTGCAGCTCCA TCGAACTACTGTAATCCAGTTTCTTTGTCCAACGCAGCTGTGGAGTTAGCCCAGAAGGTA AATCTTGAGTGCAAAATTTTAGATGTGAAGGAATTAGAGGATCTTAAAATGGGCGCATAT CTATCTGTCGGAAAGGGAAGTATGTATCCAAATAAATTCATCCATCTGACATATAAAGGG GCTAAGAAGGGAGATAAAGGAAATACGAAAAAAAAAATTGCACTAATAGGAAAAGGAATA ACGTTCGATTCAGGAGGATATAACTTGAAAGCTGCTCCAGGATCCATGATAGACTTGATG AAGTTTGATATGAGTGGTTGTGCAGCTGTGTTAGGATGTGCCTACTGTATAGGTACCATG AGACCAGACAATGTAGAAGTTCACTTCTTAAGTGCAGTGTGTGAAAATATGGTTTCCAAA AATTCCTATCGCCCTGGTGATATCATCACAGCGTCCAATGGAAAAACTATAGAAGTTGGT AACACCGATGCAGAGGGAAGACTAACATTAGCTGATGCCTTAGTCTATGCAGAAAAGTTA GGTGTGGATTACATCGTAGACATTGCCACCTTAACAGGAGCTATGCTGTACTCTCTAGGA ACTAGTTATGCTGGCGTTTTTGGAAACAACGATCAGTTAATAAATAAAATTTTAAATTCA TCTAAGACATCTAATGAGCCAGCCTGGTGGTTACCCATCATTAATGAATATAGATCCTCC CTAAATTCAAAGTATGCTGACTTGAATAATATTTCTTCCAGTGTGAAAGCTTCCTCTGTT GTGGCTTCACTATTTCTAAAGGAGTTTATTGAGAAAACCCCCTGGGCCCATATAGATATT GCGGGAGTGTCATGGAATTTCAAGGCCAGAAAACCCAAGGGTTTTGGTGTTCGTCTGTTA ACTGAGTTCGTCCTTAACGATGCGGTGTAA
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  • Fasta :-

    MHLLKLSPQIKNTYWNIPQKNFRTSLTQFGERKKNRILHLYPTCKSESRDRKLPFFESQR FSTINNKKEIRKMATIVPQVVSLDPTTIPIDYHTPIDDLNIEVKDINKEACPADEGLIVF LLNSAPKDNSKSDKGESSGAIKINSNMNDKTINEFLKEGNMENFTGKVGTSKSFYVANEK KKYISLAYVGCGPANEETELEIRKIAYTLATLLHENKNKKVSIVFELKLEENLFRFFLEH LFYEYVTDERFKSADKSTNIDYIKSLSLYMANADIYKGQVDKARVYFYGTYYAAQLIAAP SNYCNPVSLSNAAVELAQKVNLECKILDVKELEDLKMGAYLSVGKGSMYPNKFIHLTYKG AKKGDKGNTKKKIALIGKGITFDSGGYNLKAAPGSMIDLMKFDMSGCAAVLGCAYCIGTM RPDNVEVHFLSAVCENMVSKNSYRPGDIITASNGKTIEVGNTDAEGRLTLADALVYAEKL GVDYIVDIATLTGAMLYSLGTSYAGVFGNNDQLINKILNSSKTSNEPAWWLPIINEYRSS LNSKYADLNNISSSVKASSVVASLFLKEFIEKTPWAHIDIAGVSWNFKARKPKGFGVRLL TEFVLNDAV

  • title: Substrate-binding/catalytic site
  • coordinates: K378,D383,K390,D403,D463,E465,R467,L491
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PKNH_1236000132 SDNSKSDKGE0.993unspPKNH_1236000132 SDNSKSDKGE0.993unspPKNH_1236000132 SDNSKSDKGE0.993unspPKNH_1236000442 SVSKNSYRPG0.994unspPKNH_123600062 SSQRFSTINN0.995unspPKNH_1236000130 SPKDNSKSDK0.991unsp

PK14_2065c      PKH_126020      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India