PKNH_1240600 | mitochondrial inner membrane protease ATP23, putative

_IDPredictionOTHERSPmTPCS_Position
PKNH_1240600OTHER0.9999950.0000020.000003
No Results

  • Fasta :-

    >PKNH_1240600 MEEVRKRVERAKEKIKQIGREIHQFDLKKSVEKFFLENGKEKQLSDMLFLVQYSLKYKNV CKWPNYNDLLVINYNINDHFKSMLQKNGRFVQQYKNGTPDGGTDSTTTMSRDRETALGSS DKSATINHNVEGNAPQTAQKEIDANSQNGMASNIKNSRSSEDREEQIFPDGTHLTKGELP HNFLPDNSVPKSLTSKEFTPQSTPPENSARRKKENKFVTYFNEDISPYDKIKLQIFMYFV LNNYRVKILVDALSALNRPINVIYINCPNNKEQKRTFFEKVASFFTPQYKLGDVFVNNKN NYVPKSKENCSCSELSPIRYSNNPTTSSSKDGNSNYVGGYNPINNTIWICSNNIKNYYKL KYILTHELIHAFDFARANIDMYNCHHIACSEIRAYNMSNQCSYFNSKYFSPDHDVFTNFK TPSIRATPKNKCIYNNVYSSLNQYKPCTNNTHQYINEVFEKCLHDYWPFMCSPEQDSKYK PSKIFKKDF
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_1240600.fa Sequence name : PKNH_1240600 Sequence length : 489 VALUES OF COMPUTED PARAMETERS Coef20 : 3.902 CoefTot : 0.000 ChDiff : 15 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : -0.071 1.071 -0.171 0.368 MesoH : -1.122 0.017 -0.567 0.093 MuHd_075 : 13.807 11.755 5.537 4.325 MuHd_095 : 42.829 28.796 12.848 8.313 MuHd_100 : 52.612 36.029 15.530 10.337 MuHd_105 : 51.546 35.260 14.909 10.200 Hmax_075 : -19.717 2.333 -6.378 0.723 Hmax_095 : -4.300 11.200 -1.540 2.380 Hmax_100 : 7.600 17.200 1.038 4.760 Hmax_105 : -4.113 11.112 -1.713 1.977 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7276 0.2724 DFMC : 0.8903 0.1097
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 489 PKNH_1240600 MEEVRKRVERAKEKIKQIGREIHQFDLKKSVEKFFLENGKEKQLSDMLFLVQYSLKYKNVCKWPNYNDLLVINYNINDHF 80 KSMLQKNGRFVQQYKNGTPDGGTDSTTTMSRDRETALGSSDKSATINHNVEGNAPQTAQKEIDANSQNGMASNIKNSRSS 160 EDREEQIFPDGTHLTKGELPHNFLPDNSVPKSLTSKEFTPQSTPPENSARRKKENKFVTYFNEDISPYDKIKLQIFMYFV 240 LNNYRVKILVDALSALNRPINVIYINCPNNKEQKRTFFEKVASFFTPQYKLGDVFVNNKNNYVPKSKENCSCSELSPIRY 320 SNNPTTSSSKDGNSNYVGGYNPINNTIWICSNNIKNYYKLKYILTHELIHAFDFARANIDMYNCHHIACSEIRAYNMSNQ 400 CSYFNSKYFSPDHDVFTNFKTPSIRATPKNKCIYNNVYSSLNQYKPCTNNTHQYINEVFEKCLHDYWPFMCSPEQDSKYK 480 PSKIFKKDF 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ......... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_1240600 5 --MEEVR|KR 0.065 . PKNH_1240600 6 -MEEVRK|RV 0.095 . PKNH_1240600 7 MEEVRKR|VE 0.192 . PKNH_1240600 10 VRKRVER|AK 0.453 . PKNH_1240600 12 KRVERAK|EK 0.086 . PKNH_1240600 14 VERAKEK|IK 0.069 . PKNH_1240600 16 RAKEKIK|QI 0.106 . PKNH_1240600 20 KIKQIGR|EI 0.089 . PKNH_1240600 28 IHQFDLK|KS 0.059 . PKNH_1240600 29 HQFDLKK|SV 0.256 . PKNH_1240600 33 LKKSVEK|FF 0.069 . PKNH_1240600 40 FFLENGK|EK 0.056 . PKNH_1240600 42 LENGKEK|QL 0.098 . PKNH_1240600 56 LVQYSLK|YK 0.063 . PKNH_1240600 58 QYSLKYK|NV 0.088 . PKNH_1240600 62 KYKNVCK|WP 0.061 . PKNH_1240600 81 NINDHFK|SM 0.092 . PKNH_1240600 86 FKSMLQK|NG 0.068 . PKNH_1240600 89 MLQKNGR|FV 0.184 . PKNH_1240600 95 RFVQQYK|NG 0.064 . PKNH_1240600 111 STTTMSR|DR 0.121 . PKNH_1240600 113 TTMSRDR|ET 0.082 . PKNH_1240600 122 ALGSSDK|SA 0.099 . PKNH_1240600 140 APQTAQK|EI 0.075 . PKNH_1240600 155 GMASNIK|NS 0.066 . PKNH_1240600 158 SNIKNSR|SS 0.200 . PKNH_1240600 163 SRSSEDR|EE 0.106 . PKNH_1240600 176 DGTHLTK|GE 0.058 . PKNH_1240600 191 PDNSVPK|SL 0.121 . PKNH_1240600 196 PKSLTSK|EF 0.071 . PKNH_1240600 210 PPENSAR|RK 0.089 . PKNH_1240600 211 PENSARR|KK 0.166 . PKNH_1240600 212 ENSARRK|KE 0.101 . PKNH_1240600 213 NSARRKK|EN 0.346 . PKNH_1240600 216 RRKKENK|FV 0.103 . PKNH_1240600 230 DISPYDK|IK 0.073 . PKNH_1240600 232 SPYDKIK|LQ 0.066 . PKNH_1240600 245 FVLNNYR|VK 0.062 . PKNH_1240600 247 LNNYRVK|IL 0.077 . PKNH_1240600 258 ALSALNR|PI 0.107 . PKNH_1240600 271 INCPNNK|EQ 0.059 . PKNH_1240600 274 PNNKEQK|RT 0.069 . PKNH_1240600 275 NNKEQKR|TF 0.225 . PKNH_1240600 280 KRTFFEK|VA 0.088 . PKNH_1240600 290 FFTPQYK|LG 0.059 . PKNH_1240600 299 DVFVNNK|NN 0.054 . PKNH_1240600 305 KNNYVPK|SK 0.114 . PKNH_1240600 307 NYVPKSK|EN 0.061 . PKNH_1240600 319 SELSPIR|YS 0.080 . PKNH_1240600 330 PTTSSSK|DG 0.061 . PKNH_1240600 355 ICSNNIK|NY 0.067 . PKNH_1240600 359 NIKNYYK|LK 0.061 . PKNH_1240600 361 KNYYKLK|YI 0.086 . PKNH_1240600 376 HAFDFAR|AN 0.110 . PKNH_1240600 393 IACSEIR|AY 0.099 . PKNH_1240600 407 CSYFNSK|YF 0.074 . PKNH_1240600 420 DVFTNFK|TP 0.054 . PKNH_1240600 425 FKTPSIR|AT 0.087 . PKNH_1240600 429 SIRATPK|NK 0.071 . PKNH_1240600 431 RATPKNK|CI 0.070 . PKNH_1240600 445 SSLNQYK|PC 0.074 . PKNH_1240600 461 INEVFEK|CL 0.078 . PKNH_1240600 478 SPEQDSK|YK 0.062 . PKNH_1240600 480 EQDSKYK|PS 0.065 . PKNH_1240600 483 SKYKPSK|IF 0.071 . PKNH_1240600 486 KPSKIFK|KD 0.079 . PKNH_1240600 487 PSKIFKK|DF 0.156 . ____________________________^_________________

  • Fasta :-

    >PKNH_1240600 ATGGAAGAGGTACGCAAAAGGGTGGAACGAGCAAAGGAAAAAATTAAACAAATTGGTAGA GAAATTCACCAATTTGATTTAAAAAAAAGTGTAGAGAAATTTTTCCTCGAAAATGGAAAA GAAAAGCAACTCAGTGATATGTTATTCTTGGTACAATATTCACTCAAGTATAAAAATGTG TGCAAATGGCCAAATTACAATGATCTCTTAGTAATCAATTATAACATAAATGATCATTTC AAATCAATGCTTCAAAAAAATGGGCGATTTGTTCAACAATATAAAAACGGCACACCTGAT GGAGGGACAGATAGCACAACAACCATGAGCCGAGACCGAGAAACCGCACTCGGGAGTAGC GACAAGAGCGCCACAATAAATCACAACGTTGAAGGAAACGCTCCCCAGACAGCACAGAAG GAAATAGATGCTAACTCGCAGAATGGCATGGCAAGCAATATTAAAAATTCGCGCAGTAGC GAAGATAGAGAAGAACAAATTTTCCCTGATGGAACACATTTAACAAAAGGCGAACTTCCA CACAACTTCCTTCCTGATAACTCCGTGCCAAAATCGCTCACGTCGAAGGAATTCACCCCG CAAAGCACTCCCCCTGAAAACAGTGCAAGGAGAAAAAAGGAAAACAAATTTGTTACCTAC TTTAATGAAGACATAAGTCCTTACGACAAAATAAAGTTGCAAATTTTTATGTACTTTGTG TTGAACAATTATAGAGTTAAAATTTTAGTGGACGCATTATCTGCGCTAAATCGCCCAATT AATGTTATATACATAAATTGTCCTAATAATAAAGAGCAGAAGAGGACATTTTTTGAAAAG GTGGCTAGCTTCTTTACTCCCCAGTACAAACTGGGTGATGTTTTCGTGAATAATAAAAAT AATTATGTACCAAAGAGCAAAGAAAATTGCTCATGTTCGGAATTGTCCCCCATTAGATAT AGTAATAATCCAACAACTTCCTCTTCCAAGGATGGAAATTCAAATTACGTAGGTGGTTAC AACCCTATAAACAACACTATTTGGATTTGTTCAAATAATATTAAAAATTATTATAAGCTC AAATATATACTAACGCATGAACTTATACATGCCTTTGATTTTGCAAGGGCAAATATAGAC ATGTACAATTGCCACCATATTGCTTGCTCAGAAATAAGAGCCTATAATATGAGCAATCAG TGCAGTTATTTTAACAGCAAATATTTTTCCCCCGATCATGATGTCTTTACTAATTTTAAA ACACCCTCAATTAGAGCTACACCTAAGAATAAATGCATATATAATAATGTGTATTCATCT CTCAACCAGTACAAGCCTTGTACCAACAACACACATCAGTACATAAATGAAGTATTTGAG AAATGCCTACACGATTATTGGCCCTTCATGTGCTCACCTGAACAGGATAGCAAATACAAG CCCTCCAAGATTTTTAAGAAGGATTTCTGA
  • Download Fasta

  • Fasta :-

    MEEVRKRVERAKEKIKQIGREIHQFDLKKSVEKFFLENGKEKQLSDMLFLVQYSLKYKNV CKWPNYNDLLVINYNINDHFKSMLQKNGRFVQQYKNGTPDGGTDSTTTMSRDRETALGSS DKSATINHNVEGNAPQTAQKEIDANSQNGMASNIKNSRSSEDREEQIFPDGTHLTKGELP HNFLPDNSVPKSLTSKEFTPQSTPPENSARRKKENKFVTYFNEDISPYDKIKLQIFMYFV LNNYRVKILVDALSALNRPINVIYINCPNNKEQKRTFFEKVASFFTPQYKLGDVFVNNKN NYVPKSKENCSCSELSPIRYSNNPTTSSSKDGNSNYVGGYNPINNTIWICSNNIKNYYKL KYILTHELIHAFDFARANIDMYNCHHIACSEIRAYNMSNQCSYFNSKYFSPDHDVFTNFK TPSIRATPKNKCIYNNVYSSLNQYKPCTNNTHQYINEVFEKCLHDYWPFMCSPEQDSKYK PSKIFKKDF

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IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PKNH_1240600195 SKSLTSKEFT0.995unspPKNH_1240600195 SKSLTSKEFT0.995unspPKNH_1240600195 SKSLTSKEFT0.995unspPKNH_1240600226 SNEDISPYDK0.997unspPKNH_1240600159 SKNSRSSEDR0.997unspPKNH_1240600160 SNSRSSEDRE0.998unsp

PK14_1845w      PKH_126460      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India