PKNH_1264300 | mitochondrial intermediate peptidase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004222      

  • Computed_GO_Functions:  metalloendopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:  GO:0005739      

  • Curated_GO_Components:  mitochondrion      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PKNH_1264300OTHER0.7913060.0006510.208043
No Results

  • Fasta :-

    >PKNH_1264300 MMNRRSCQLVEAVCSGTTLEGIKWCATSRKVRSSFLRRFPGGTSRRNFFFKKESEKTGET TNFLAKLNLKNFVKKGRNGGGIIYSEDGDRRKENYNCQSLGQKSKEHLENVDTLSEGDVE RIDKILAELTRVTKQTNGKGHLLELIGLTSSGENVIQASLVCINTCDSILKKMCKEQNIF KIINMVDTVSNNLCKLGDALELLRNLHTNQGVMAKAHEALEKLTTYIDVINIDEKIYHFL KTKYEEHAHALDREHAEVLLNMIMSMENQGVHIKDRKQRQEYLELQAQEKYISFHATSNV GNEYDGVFIQKRRLLPFIDEEVIHNYEKKIKPFIESGKVKKNNTHENYDSAEWIFLLQDS SFIMTVLENVPDEEVARNAHALLKKPNQTFLKNILVLQYYRNMLTQFRNFRNFSEYSLKN CILNSPEKVHYFLRNFFNTVLPHFFEELRFVERYIDATSSRGERTMTRHLEGGAVYCAGE GTSEKVSGNTLEHHTQWFNGADKHPRSMDGGGRRPKLTPENMFYYMNEIRKEKLKEIEAE MKNRLTLYQVIRFVVKLLKDSYALEMVNVAPLPNELWDESILKFEIRDGSYTYGYLYMDL FERENKNHSIAQYTVRCSKNMNACLKHQWFEESAREFPFFYAGIVRDGMDNNKASGTTHD TPNWPSVGRTHEQAYRQTTSTFLVCNFSTKLSAPDGQGASASAPPQDNLFINEKIAYSLG RIKMSIDKVNMFLHEFGHTLHCILSSTYLQHLSGNRGGVDFSEFTSHFFEEYLNSYDALL QLYGENGKETSHSREKTERMIKSYLDSKNILCYYSIMQVTIQSIIDQIFYCLSDKSSCIT ERNELIEKKINEYFSGVYYKDIFILDLFPQIHFSKTTHLVHYPANYFCYLYCSVLSKYVW ERTFKRDLMNPRKGAELVNFMRGGSVDSSLRNIIALVEGDSEKVQYYTENPQHLPLEDYL KHYSGKNKSEEYNTFLEAL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_1264300.fa Sequence name : PKNH_1264300 Sequence length : 979 VALUES OF COMPUTED PARAMETERS Coef20 : 4.454 CoefTot : 0.215 ChDiff : 0 ZoneTo : 10 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.841 1.229 0.084 0.516 MesoH : -0.559 0.324 -0.411 0.178 MuHd_075 : 14.529 1.795 1.550 3.030 MuHd_095 : 27.831 18.060 7.321 5.498 MuHd_100 : 27.343 17.237 7.236 6.056 MuHd_105 : 24.812 15.343 6.729 5.993 Hmax_075 : 4.375 8.283 0.488 1.488 Hmax_095 : 14.350 12.600 3.257 3.456 Hmax_100 : 14.200 12.200 2.864 4.190 Hmax_105 : 14.000 12.250 3.480 4.387 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5195 0.4805 DFMC : 0.6068 0.3932
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 979 PKNH_1264300 MMNRRSCQLVEAVCSGTTLEGIKWCATSRKVRSSFLRRFPGGTSRRNFFFKKESEKTGETTNFLAKLNLKNFVKKGRNGG 80 GIIYSEDGDRRKENYNCQSLGQKSKEHLENVDTLSEGDVERIDKILAELTRVTKQTNGKGHLLELIGLTSSGENVIQASL 160 VCINTCDSILKKMCKEQNIFKIINMVDTVSNNLCKLGDALELLRNLHTNQGVMAKAHEALEKLTTYIDVINIDEKIYHFL 240 KTKYEEHAHALDREHAEVLLNMIMSMENQGVHIKDRKQRQEYLELQAQEKYISFHATSNVGNEYDGVFIQKRRLLPFIDE 320 EVIHNYEKKIKPFIESGKVKKNNTHENYDSAEWIFLLQDSSFIMTVLENVPDEEVARNAHALLKKPNQTFLKNILVLQYY 400 RNMLTQFRNFRNFSEYSLKNCILNSPEKVHYFLRNFFNTVLPHFFEELRFVERYIDATSSRGERTMTRHLEGGAVYCAGE 480 GTSEKVSGNTLEHHTQWFNGADKHPRSMDGGGRRPKLTPENMFYYMNEIRKEKLKEIEAEMKNRLTLYQVIRFVVKLLKD 560 SYALEMVNVAPLPNELWDESILKFEIRDGSYTYGYLYMDLFERENKNHSIAQYTVRCSKNMNACLKHQWFEESAREFPFF 640 YAGIVRDGMDNNKASGTTHDTPNWPSVGRTHEQAYRQTTSTFLVCNFSTKLSAPDGQGASASAPPQDNLFINEKIAYSLG 720 RIKMSIDKVNMFLHEFGHTLHCILSSTYLQHLSGNRGGVDFSEFTSHFFEEYLNSYDALLQLYGENGKETSHSREKTERM 800 IKSYLDSKNILCYYSIMQVTIQSIIDQIFYCLSDKSSCITERNELIEKKINEYFSGVYYKDIFILDLFPQIHFSKTTHLV 880 HYPANYFCYLYCSVLSKYVWERTFKRDLMNPRKGAELVNFMRGGSVDSSLRNIIALVEGDSEKVQYYTENPQHLPLEDYL 960 KHYSGKNKSEEYNTFLEAL 1040 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ................................................................................ 960 ................... 1040 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_1264300 4 ---MMNR|RS 0.083 . PKNH_1264300 5 --MMNRR|SC 0.236 . PKNH_1264300 23 TTLEGIK|WC 0.059 . PKNH_1264300 29 KWCATSR|KV 0.109 . PKNH_1264300 30 WCATSRK|VR 0.089 . PKNH_1264300 32 ATSRKVR|SS 0.472 . PKNH_1264300 37 VRSSFLR|RF 0.108 . PKNH_1264300 38 RSSFLRR|FP 0.205 . PKNH_1264300 45 FPGGTSR|RN 0.076 . PKNH_1264300 46 PGGTSRR|NF 0.131 . PKNH_1264300 51 RRNFFFK|KE 0.096 . PKNH_1264300 52 RNFFFKK|ES 0.149 . PKNH_1264300 56 FKKESEK|TG 0.062 . PKNH_1264300 66 TTNFLAK|LN 0.064 . PKNH_1264300 70 LAKLNLK|NF 0.059 . PKNH_1264300 74 NLKNFVK|KG 0.066 . PKNH_1264300 75 LKNFVKK|GR 0.149 . PKNH_1264300 77 NFVKKGR|NG 0.124 . PKNH_1264300 90 YSEDGDR|RK 0.079 . PKNH_1264300 91 SEDGDRR|KE 0.093 . PKNH_1264300 92 EDGDRRK|EN 0.081 . PKNH_1264300 103 CQSLGQK|SK 0.089 . PKNH_1264300 105 SLGQKSK|EH 0.068 . PKNH_1264300 121 SEGDVER|ID 0.080 . PKNH_1264300 124 DVERIDK|IL 0.098 . PKNH_1264300 131 ILAELTR|VT 0.082 . PKNH_1264300 134 ELTRVTK|QT 0.127 . PKNH_1264300 139 TKQTNGK|GH 0.066 . PKNH_1264300 171 TCDSILK|KM 0.062 . PKNH_1264300 172 CDSILKK|MC 0.110 . PKNH_1264300 175 ILKKMCK|EQ 0.060 . PKNH_1264300 181 KEQNIFK|II 0.068 . PKNH_1264300 195 VSNNLCK|LG 0.067 . PKNH_1264300 204 DALELLR|NL 0.076 . PKNH_1264300 215 NQGVMAK|AH 0.083 . PKNH_1264300 222 AHEALEK|LT 0.065 . PKNH_1264300 235 VINIDEK|IY 0.059 . PKNH_1264300 241 KIYHFLK|TK 0.061 . PKNH_1264300 243 YHFLKTK|YE 0.067 . PKNH_1264300 253 HAHALDR|EH 0.101 . PKNH_1264300 274 NQGVHIK|DR 0.070 . PKNH_1264300 276 GVHIKDR|KQ 0.105 . PKNH_1264300 277 VHIKDRK|QR 0.076 . PKNH_1264300 279 IKDRKQR|QE 0.282 . PKNH_1264300 290 ELQAQEK|YI 0.074 . PKNH_1264300 311 DGVFIQK|RR 0.052 . PKNH_1264300 312 GVFIQKR|RL 0.165 . PKNH_1264300 313 VFIQKRR|LL 0.111 . PKNH_1264300 328 VIHNYEK|KI 0.066 . PKNH_1264300 329 IHNYEKK|IK 0.128 . PKNH_1264300 331 NYEKKIK|PF 0.071 . PKNH_1264300 338 PFIESGK|VK 0.057 . PKNH_1264300 340 IESGKVK|KN 0.087 . PKNH_1264300 341 ESGKVKK|NN 0.118 . PKNH_1264300 377 PDEEVAR|NA 0.129 . PKNH_1264300 384 NAHALLK|KP 0.060 . PKNH_1264300 385 AHALLKK|PN 0.103 . PKNH_1264300 392 PNQTFLK|NI 0.062 . PKNH_1264300 401 LVLQYYR|NM 0.073 . PKNH_1264300 408 NMLTQFR|NF 0.068 . PKNH_1264300 411 TQFRNFR|NF 0.194 . PKNH_1264300 419 FSEYSLK|NC 0.057 . PKNH_1264300 428 ILNSPEK|VH 0.058 . PKNH_1264300 434 KVHYFLR|NF 0.086 . PKNH_1264300 449 HFFEELR|FV 0.136 . PKNH_1264300 453 ELRFVER|YI 0.106 . PKNH_1264300 461 IDATSSR|GE 0.108 . PKNH_1264300 464 TSSRGER|TM 0.304 . PKNH_1264300 468 GERTMTR|HL 0.119 . PKNH_1264300 485 GEGTSEK|VS 0.070 . PKNH_1264300 503 WFNGADK|HP 0.063 . PKNH_1264300 506 GADKHPR|SM 0.252 . PKNH_1264300 513 SMDGGGR|RP 0.065 . PKNH_1264300 514 MDGGGRR|PK 0.137 . PKNH_1264300 516 GGGRRPK|LT 0.127 . PKNH_1264300 530 YYMNEIR|KE 0.071 . PKNH_1264300 531 YMNEIRK|EK 0.082 . PKNH_1264300 533 NEIRKEK|LK 0.134 . PKNH_1264300 535 IRKEKLK|EI 0.091 . PKNH_1264300 542 EIEAEMK|NR 0.056 . PKNH_1264300 544 EAEMKNR|LT 0.088 . PKNH_1264300 552 TLYQVIR|FV 0.183 . PKNH_1264300 556 VIRFVVK|LL 0.065 . PKNH_1264300 559 FVVKLLK|DS 0.067 . PKNH_1264300 583 WDESILK|FE 0.060 . PKNH_1264300 587 ILKFEIR|DG 0.110 . PKNH_1264300 603 YMDLFER|EN 0.067 . PKNH_1264300 606 LFERENK|NH 0.137 . PKNH_1264300 616 IAQYTVR|CS 0.090 . PKNH_1264300 619 YTVRCSK|NM 0.113 . PKNH_1264300 626 NMNACLK|HQ 0.070 . PKNH_1264300 635 WFEESAR|EF 0.078 . PKNH_1264300 646 FYAGIVR|DG 0.098 . PKNH_1264300 653 DGMDNNK|AS 0.069 . PKNH_1264300 669 NWPSVGR|TH 0.104 . PKNH_1264300 676 THEQAYR|QT 0.085 . PKNH_1264300 690 VCNFSTK|LS 0.067 . PKNH_1264300 714 NLFINEK|IA 0.064 . PKNH_1264300 721 IAYSLGR|IK 0.095 . PKNH_1264300 723 YSLGRIK|MS 0.069 . PKNH_1264300 728 IKMSIDK|VN 0.054 . PKNH_1264300 756 QHLSGNR|GG 0.062 . PKNH_1264300 788 LYGENGK|ET 0.066 . PKNH_1264300 794 KETSHSR|EK 0.074 . PKNH_1264300 796 TSHSREK|TE 0.062 . PKNH_1264300 799 SREKTER|MI 0.148 . PKNH_1264300 802 KTERMIK|SY 0.158 . PKNH_1264300 808 KSYLDSK|NI 0.058 . PKNH_1264300 835 FYCLSDK|SS 0.079 . PKNH_1264300 842 SSCITER|NE 0.080 . PKNH_1264300 848 RNELIEK|KI 0.063 . PKNH_1264300 849 NELIEKK|IN 0.081 . PKNH_1264300 860 FSGVYYK|DI 0.081 . PKNH_1264300 875 PQIHFSK|TT 0.064 . PKNH_1264300 897 YCSVLSK|YV 0.086 . PKNH_1264300 902 SKYVWER|TF 0.096 . PKNH_1264300 905 VWERTFK|RD 0.082 . PKNH_1264300 906 WERTFKR|DL 0.269 . PKNH_1264300 912 RDLMNPR|KG 0.076 . PKNH_1264300 913 DLMNPRK|GA 0.113 . PKNH_1264300 922 ELVNFMR|GG 0.079 . PKNH_1264300 931 SVDSSLR|NI 0.082 . PKNH_1264300 943 VEGDSEK|VQ 0.058 . PKNH_1264300 961 PLEDYLK|HY 0.071 . PKNH_1264300 966 LKHYSGK|NK 0.094 . PKNH_1264300 968 HYSGKNK|SE 0.101 . ____________________________^_________________

  • Fasta :-

    >PKNH_1264300 ATGATGAACCGCAGATCTTGTCAGCTGGTCGAGGCGGTGTGTAGTGGGACGACACTTGAA GGTATAAAATGGTGCGCTACTTCTAGAAAAGTTCGTAGCTCCTTTTTGAGGAGATTCCCT GGGGGGACATCCCGTAGAAATTTCTTCTTCAAAAAGGAGAGCGAAAAAACAGGAGAAACG ACAAATTTTCTGGCAAAACTGAATTTAAAAAATTTTGTAAAAAAAGGAAGAAATGGGGGA GGGATAATCTACTCGGAGGATGGGGATCGAAGGAAGGAGAATTACAATTGCCAATCGTTA GGCCAAAAGAGTAAGGAGCATCTTGAAAATGTAGACACGCTAAGTGAAGGTGATGTAGAA AGAATAGATAAAATTCTTGCAGAGTTAACCAGAGTAACAAAACAGACAAATGGAAAGGGG CACCTGCTAGAACTGATTGGATTAACAAGCAGCGGAGAAAATGTCATACAAGCCAGCCTC GTCTGCATAAATACATGCGATAGTATACTAAAGAAAATGTGCAAAGAGCAAAATATTTTC AAAATTATCAACATGGTAGATACAGTTTCAAATAACTTATGCAAATTAGGAGATGCACTG GAATTGCTCAGAAATCTACACACTAACCAAGGGGTAATGGCCAAGGCACATGAGGCTTTG GAGAAGCTGACCACGTATATTGACGTAATTAATATTGATGAAAAAATTTACCATTTTTTA AAAACGAAATATGAAGAGCATGCACATGCGTTGGATCGGGAGCACGCAGAAGTTCTGCTC AACATGATAATGTCCATGGAAAATCAGGGGGTCCATATAAAGGATAGGAAGCAGAGACAA GAATATTTGGAACTCCAGGCACAAGAAAAATATATTTCCTTTCATGCTACATCGAATGTC GGAAATGAGTATGACGGTGTGTTCATACAAAAGAGGAGACTCCTACCTTTTATCGATGAG GAGGTTATACATAATTACGAGAAAAAAATAAAACCTTTTATTGAAAGTGGTAAAGTAAAG AAAAATAACACACATGAAAATTACGATTCAGCTGAATGGATATTTCTCCTCCAGGACAGC TCGTTCATCATGACGGTGCTTGAAAATGTCCCTGATGAAGAAGTAGCAAGGAACGCCCAT GCGCTACTGAAGAAGCCAAACCAGACATTCCTAAAAAACATACTGGTGTTGCAGTATTAT AGAAATATGCTAACTCAATTTCGAAATTTTAGAAACTTCAGTGAATACTCTCTAAAAAAT TGCATTCTAAACAGCCCGGAGAAGGTGCACTATTTTTTGAGGAATTTTTTTAATACTGTT TTGCCCCACTTTTTTGAAGAGCTGCGTTTTGTGGAAAGGTACATCGACGCGACTTCATCC AGAGGGGAAAGGACGATGACGAGACATCTCGAGGGGGGTGCAGTATACTGTGCGGGGGAA GGCACCTCAGAAAAGGTCTCTGGAAATACGTTAGAACACCACACGCAGTGGTTCAACGGA GCTGATAAGCACCCACGCAGTATGGACGGAGGAGGGAGGCGCCCCAAGCTAACCCCGGAA AATATGTTCTACTACATGAACGAAATACGGAAGGAGAAGCTCAAAGAGATCGAGGCGGAA ATGAAAAATCGATTGACTCTGTATCAGGTTATTCGTTTTGTCGTAAAGCTCTTGAAGGAT TCCTACGCTCTGGAGATGGTGAACGTTGCACCGTTGCCGAACGAACTGTGGGACGAGAGC ATATTAAAATTTGAAATAAGGGACGGGAGTTACACTTACGGGTATTTATATATGGATCTT TTCGAGCGCGAAAACAAGAACCACTCAATTGCTCAATACACCGTTCGGTGCTCCAAGAAT ATGAACGCCTGCTTGAAGCACCAGTGGTTTGAGGAAAGCGCGCGAGAGTTCCCCTTCTTC TACGCGGGCATCGTGCGAGACGGCATGGACAACAATAAAGCCAGCGGAACAACCCACGAC ACGCCCAACTGGCCATCTGTTGGGCGAACCCATGAACAAGCATACCGACAAACCACATCC ACCTTCCTTGTGTGCAACTTCAGTACAAAATTGAGCGCCCCGGATGGACAAGGCGCCTCC GCGAGTGCCCCCCCTCAGGATAACCTCTTCATAAATGAAAAAATAGCCTACTCACTTGGA AGAATAAAAATGTCCATCGACAAGGTAAACATGTTTCTACACGAATTTGGACACACCCTC CACTGCATACTGAGCTCGACATATCTGCAGCATCTGTCAGGAAATAGAGGTGGCGTAGAT TTCTCAGAATTCACATCTCATTTTTTCGAGGAATATTTAAACAGTTACGATGCGTTGTTG CAACTATATGGAGAAAATGGAAAAGAAACAAGCCATAGCCGCGAGAAGACCGAAAGAATG ATAAAAAGTTATTTGGATAGCAAAAATATTCTCTGCTATTATTCCATCATGCAGGTGACG ATTCAGTCCATCATTGATCAGATTTTTTATTGTCTATCGGACAAATCCAGTTGCATTACT GAGCGAAATGAATTAATTGAGAAAAAAATAAATGAGTACTTCTCCGGGGTCTACTACAAG GATATATTTATACTGGACTTATTTCCCCAGATCCATTTTTCCAAAACGACACATCTCGTC CATTATCCTGCCAATTATTTCTGCTACCTGTACTGCTCCGTGCTGTCCAAGTATGTTTGG GAGCGCACATTCAAGAGGGATTTGATGAATCCGAGGAAGGGTGCCGAACTTGTGAACTTC ATGCGCGGGGGCTCGGTCGACTCCAGCTTAAGAAACATCATTGCATTGGTGGAAGGTGAC TCGGAGAAGGTTCAGTACTACACGGAAAATCCGCAACACCTGCCACTTGAAGATTATTTG AAACATTACTCGGGGAAAAACAAGAGCGAGGAATACAACACCTTTTTGGAGGCCCTTTAA
  • Download Fasta

  • Fasta :-

    MMNRRSCQLVEAVCSGTTLEGIKWCATSRKVRSSFLRRFPGGTSRRNFFFKKESEKTGET TNFLAKLNLKNFVKKGRNGGGIIYSEDGDRRKENYNCQSLGQKSKEHLENVDTLSEGDVE RIDKILAELTRVTKQTNGKGHLLELIGLTSSGENVIQASLVCINTCDSILKKMCKEQNIF KIINMVDTVSNNLCKLGDALELLRNLHTNQGVMAKAHEALEKLTTYIDVINIDEKIYHFL KTKYEEHAHALDREHAEVLLNMIMSMENQGVHIKDRKQRQEYLELQAQEKYISFHATSNV GNEYDGVFIQKRRLLPFIDEEVIHNYEKKIKPFIESGKVKKNNTHENYDSAEWIFLLQDS SFIMTVLENVPDEEVARNAHALLKKPNQTFLKNILVLQYYRNMLTQFRNFRNFSEYSLKN CILNSPEKVHYFLRNFFNTVLPHFFEELRFVERYIDATSSRGERTMTRHLEGGAVYCAGE GTSEKVSGNTLEHHTQWFNGADKHPRSMDGGGRRPKLTPENMFYYMNEIRKEKLKEIEAE MKNRLTLYQVIRFVVKLLKDSYALEMVNVAPLPNELWDESILKFEIRDGSYTYGYLYMDL FERENKNHSIAQYTVRCSKNMNACLKHQWFEESAREFPFFYAGIVRDGMDNNKASGTTHD TPNWPSVGRTHEQAYRQTTSTFLVCNFSTKLSAPDGQGASASAPPQDNLFINEKIAYSLG RIKMSIDKVNMFLHEFGHTLHCILSSTYLQHLSGNRGGVDFSEFTSHFFEEYLNSYDALL QLYGENGKETSHSREKTERMIKSYLDSKNILCYYSIMQVTIQSIIDQIFYCLSDKSSCIT ERNELIEKKINEYFSGVYYKDIFILDLFPQIHFSKTTHLVHYPANYFCYLYCSVLSKYVW ERTFKRDLMNPRKGAELVNFMRGGSVDSSLRNIIALVEGDSEKVQYYTENPQHLPLEDYL KHYSGKNKSEEYNTFLEAL

  • title: Zn binding site
  • coordinates: H734,H738,E763
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
PKNH_126430054 SFKKESEKTG0.992unspPKNH_1264300793 SETSHSREKT0.997unsp

PK13_3680c      PKH_121670      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India