PKNH_1301100 | lysophospholipase, putative

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_IDPredictionOTHERSPmTPCS_Position
PKNH_1301100OTHER0.9998360.0001250.000039
No Results

  • Fasta :-

    >PKNH_1301100 MVENEVYNQDMRTVLRREQLDGRPTIRSFFNKDGLLLRTYGWIERNAIGIILLIHGLNSH TRFSFLRHNVHVLNNNRAILMDGNNYYIYKDSWIEHFNKHRYSVFGIDLQGHGESEGWEN LSLNVKKFDDLVYDVLEYIPKIQEDSMRYLNNDSNNNGSSGSSRRSNRNNRGGDSSRNYH RGNRIATPLPVYIIGQSMGGNVALRTLQLVGKNRGLNRRLNIRGCVSLSGMVAIEPLGLP SSYTYKCFFMPLSKIFSDFLPTLRILCKLPYKKFQYIRDIGRYDRMRYRNGITCKFAYEL LRAMDNLDHDVRYMPRDIPILFIHSEKDRLCYPEGVVSFYNRLNIANKELHMLNYMEHML SMEPGNERVLSKIMNWLHNMSRS
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_1301100.fa Sequence name : PKNH_1301100 Sequence length : 383 VALUES OF COMPUTED PARAMETERS Coef20 : 3.903 CoefTot : 0.000 ChDiff : 15 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.135 1.235 0.199 0.531 MesoH : -0.355 0.408 -0.259 0.191 MuHd_075 : 28.660 21.873 7.785 6.686 MuHd_095 : 18.552 14.854 5.215 6.764 MuHd_100 : 12.641 5.444 2.336 4.172 MuHd_105 : 13.167 4.031 0.891 3.236 Hmax_075 : -6.067 8.283 -2.968 2.683 Hmax_095 : -13.037 2.362 -4.615 1.593 Hmax_100 : -8.900 0.400 -5.324 0.840 Hmax_105 : -5.512 -0.000 -4.539 1.260 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6106 0.3894 DFMC : 0.7915 0.2085
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 383 PKNH_1301100 MVENEVYNQDMRTVLRREQLDGRPTIRSFFNKDGLLLRTYGWIERNAIGIILLIHGLNSHTRFSFLRHNVHVLNNNRAIL 80 MDGNNYYIYKDSWIEHFNKHRYSVFGIDLQGHGESEGWENLSLNVKKFDDLVYDVLEYIPKIQEDSMRYLNNDSNNNGSS 160 GSSRRSNRNNRGGDSSRNYHRGNRIATPLPVYIIGQSMGGNVALRTLQLVGKNRGLNRRLNIRGCVSLSGMVAIEPLGLP 240 SSYTYKCFFMPLSKIFSDFLPTLRILCKLPYKKFQYIRDIGRYDRMRYRNGITCKFAYELLRAMDNLDHDVRYMPRDIPI 320 LFIHSEKDRLCYPEGVVSFYNRLNIANKELHMLNYMEHMLSMEPGNERVLSKIMNWLHNMSRS 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ............................................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_1301100 12 VYNQDMR|TV 0.091 . PKNH_1301100 16 DMRTVLR|RE 0.069 . PKNH_1301100 17 MRTVLRR|EQ 0.217 . PKNH_1301100 23 REQLDGR|PT 0.090 . PKNH_1301100 27 DGRPTIR|SF 0.123 . PKNH_1301100 32 IRSFFNK|DG 0.085 . PKNH_1301100 38 KDGLLLR|TY 0.113 . PKNH_1301100 45 TYGWIER|NA 0.098 . PKNH_1301100 62 GLNSHTR|FS 0.112 . PKNH_1301100 67 TRFSFLR|HN 0.121 . PKNH_1301100 77 HVLNNNR|AI 0.075 . PKNH_1301100 90 NNYYIYK|DS 0.078 . PKNH_1301100 99 WIEHFNK|HR 0.064 . PKNH_1301100 101 EHFNKHR|YS 0.098 . PKNH_1301100 126 NLSLNVK|KF 0.066 . PKNH_1301100 127 LSLNVKK|FD 0.135 . PKNH_1301100 141 VLEYIPK|IQ 0.067 . PKNH_1301100 148 IQEDSMR|YL 0.097 . PKNH_1301100 164 GSSGSSR|RS 0.120 . PKNH_1301100 165 SSGSSRR|SN 0.343 . PKNH_1301100 168 SSRRSNR|NN 0.439 . PKNH_1301100 171 RSNRNNR|GG 0.423 . PKNH_1301100 177 RGGDSSR|NY 0.103 . PKNH_1301100 181 SSRNYHR|GN 0.122 . PKNH_1301100 184 NYHRGNR|IA 0.265 . PKNH_1301100 205 GGNVALR|TL 0.092 . PKNH_1301100 212 TLQLVGK|NR 0.066 . PKNH_1301100 214 QLVGKNR|GL 0.106 . PKNH_1301100 218 KNRGLNR|RL 0.091 . PKNH_1301100 219 NRGLNRR|LN 0.148 . PKNH_1301100 223 NRRLNIR|GC 0.087 . PKNH_1301100 246 PSSYTYK|CF 0.071 . PKNH_1301100 254 FFMPLSK|IF 0.072 . PKNH_1301100 264 DFLPTLR|IL 0.067 . PKNH_1301100 268 TLRILCK|LP 0.069 . PKNH_1301100 272 LCKLPYK|KF 0.062 . PKNH_1301100 273 CKLPYKK|FQ 0.081 . PKNH_1301100 278 KKFQYIR|DI 0.178 . PKNH_1301100 282 YIRDIGR|YD 0.082 . PKNH_1301100 285 DIGRYDR|MR 0.182 . PKNH_1301100 287 GRYDRMR|YR 0.116 . PKNH_1301100 289 YDRMRYR|NG 0.085 . PKNH_1301100 295 RNGITCK|FA 0.095 . PKNH_1301100 302 FAYELLR|AM 0.086 . PKNH_1301100 312 NLDHDVR|YM 0.078 . PKNH_1301100 316 DVRYMPR|DI 0.110 . PKNH_1301100 327 LFIHSEK|DR 0.065 . PKNH_1301100 329 IHSEKDR|LC 0.113 . PKNH_1301100 342 VVSFYNR|LN 0.093 . PKNH_1301100 348 RLNIANK|EL 0.070 . PKNH_1301100 368 MEPGNER|VL 0.099 . PKNH_1301100 372 NERVLSK|IM 0.069 . PKNH_1301100 382 WLHNMSR|S- 0.142 . ____________________________^_________________

  • Fasta :-

    >PKNH_1301100 ATGGTTGAAAATGAAGTATATAACCAGGATATGAGAACAGTGCTTAGAAGGGAACAGCTA GATGGAAGACCAACGATTCGTTCATTTTTTAATAAGGATGGTTTGCTATTAAGAACATAT GGTTGGATAGAAAGGAATGCGATAGGCATTATATTACTAATTCATGGATTAAATTCACAC ACGAGGTTTTCATTCTTAAGGCATAATGTCCATGTATTAAATAATAATAGAGCAATATTA ATGGACGGAAATAATTATTACATTTATAAAGATAGCTGGATAGAGCATTTTAATAAACAT AGGTATTCCGTTTTTGGAATAGATTTACAAGGACATGGGGAATCAGAAGGATGGGAAAAT TTAAGCCTTAATGTGAAAAAATTTGATGATTTAGTATATGATGTGCTTGAATATATTCCG AAAATTCAAGAAGATAGCATGCGATATTTAAATAATGACAGTAACAATAATGGTAGCAGT GGCAGTAGTCGTAGGAGTAATAGGAACAACAGAGGTGGTGACTCCTCTCGTAATTATCAC AGGGGCAATAGAATAGCGACACCTCTTCCAGTTTATATAATTGGTCAATCTATGGGCGGA AACGTTGCTCTAAGAACATTACAGCTAGTTGGAAAAAATAGGGGGCTTAATCGAAGACTA AATATAAGAGGTTGTGTATCATTATCTGGTATGGTTGCTATAGAACCATTAGGATTACCG AGCTCATATACGTATAAATGTTTCTTTATGCCCTTGTCAAAAATTTTTTCTGATTTCTTA CCAACATTAAGAATTCTATGCAAACTTCCTTATAAAAAGTTTCAATATATTCGTGACATA GGTCGATATGACAGAATGCGTTATAGAAATGGTATAACATGCAAATTTGCCTATGAACTT TTAAGGGCAATGGATAATTTAGACCATGATGTGAGATACATGCCCAGAGATATTCCTATA TTGTTTATTCATTCAGAGAAAGACAGATTGTGCTATCCTGAAGGTGTCGTTTCATTTTAT AATAGACTAAATATTGCTAATAAGGAACTGCACATGTTAAATTATATGGAGCATATGCTA AGTATGGAACCAGGAAATGAAAGGGTCTTAAGTAAAATTATGAATTGGCTTCACAACATG TCGAGGTCGTAA
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  • Fasta :-

    MVENEVYNQDMRTVLRREQLDGRPTIRSFFNKDGLLLRTYGWIERNAIGIILLIHGLNSH TRFSFLRHNVHVLNNNRAILMDGNNYYIYKDSWIEHFNKHRYSVFGIDLQGHGESEGWEN LSLNVKKFDDLVYDVLEYIPKIQEDSMRYLNNDSNNNGSSGSSRRSNRNNRGGDSSRNYH RGNRIATPLPVYIIGQSMGGNVALRTLQLVGKNRGLNRRLNIRGCVSLSGMVAIEPLGLP SSYTYKCFFMPLSKIFSDFLPTLRILCKLPYKKFQYIRDIGRYDRMRYRNGITCKFAYEL LRAMDNLDHDVRYMPRDIPILFIHSEKDRLCYPEGVVSFYNRLNIANKELHMLNYMEHML SMEPGNERVLSKIMNWLHNMSRS

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PKNH_1301100325 SLFIHSEKDR0.995unspPKNH_1301100325 SLFIHSEKDR0.995unspPKNH_1301100325 SLFIHSEKDR0.995unspPKNH_1301100163 SSSGSSRRSN0.995unspPKNH_1301100166 SSSRRSNRNN0.997unsp

PKH_130004      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India