PKNH_1320400 | alpha/beta hydrolase, putative

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_IDPredictionOTHERSPmTPCS_Position
PKNH_1320400OTHER0.9999920.0000020.000007
No Results

  • Fasta :-

    >PKNH_1320400 MRSEEDAGNVGITEEVEEKEECNTIVMEKRKKYFQILSSEQKDTHSDDRIEQPQLNHGGV FPEDTSPHSQEEEEERKKQKRDKKKDDSYPLLVVNKKGTIPKDDDRAKNQMLTTEEVINS PEETSRKGCLLKGERKYLLALKSIIRTRDGRHANGANGESGNHSGGCFDRGSDNHRRYSY FAKNTPRDETVNAEMHSHVLMDKSNGNRGSAWTPNVEKDPCVEASQGEKSEESARRKKWN FRRRIIGRIGHRAKGEDVCEEANKAAQPTIQSSTRSSTHHPANPSTEENNFVVYKVPRYL KKKNIKCPFVYRKVFFGKYGIINYDLKGNKKGTLVITFHGLNGTNLTFLDIQKTLVKYKY QVLNFDLYGHGLSACPKYNHRKKTYGINFFLTQTEELLTHLKLLHKDFYLIGFSMGCVIA ISFAKKYIKQVKKIILISPVGILEKKPFALKVLKLFPFLINISSFFMLPCFISKKNFKKA PKGASKKRQKSGNKEDPQCDTNDAYKDATDKSLEQDTQDDSDNDTSDYLYNRIMWQAFVK KNITHSILGCINNLKMWSAHDIFKEVGLHHIPVLILCGEKDNICSVHVFKNTSKFFINCH MIIFRNASHLVLVEKSKEINSCVLTFFHFPNNADLKTVHHMFPVDTLGNSVLCQRGDLL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_1320400.fa Sequence name : PKNH_1320400 Sequence length : 659 VALUES OF COMPUTED PARAMETERS Coef20 : 2.727 CoefTot : 0.247 ChDiff : 24 ZoneTo : 3 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.171 2.012 0.454 0.766 MesoH : 0.131 1.037 -0.211 0.397 MuHd_075 : 15.885 14.813 5.935 2.652 MuHd_095 : 28.614 13.576 7.165 5.640 MuHd_100 : 11.846 6.226 2.444 3.324 MuHd_105 : 9.763 5.717 3.155 1.600 Hmax_075 : -8.900 1.300 -3.191 0.790 Hmax_095 : -5.300 2.800 -2.605 2.620 Hmax_100 : -11.100 -0.300 -4.884 1.400 Hmax_105 : -12.133 -0.117 -4.089 0.385 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7734 0.2266 DFMC : 0.8298 0.1702
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 659 PKNH_1320400 MRSEEDAGNVGITEEVEEKEECNTIVMEKRKKYFQILSSEQKDTHSDDRIEQPQLNHGGVFPEDTSPHSQEEEEERKKQK 80 RDKKKDDSYPLLVVNKKGTIPKDDDRAKNQMLTTEEVINSPEETSRKGCLLKGERKYLLALKSIIRTRDGRHANGANGES 160 GNHSGGCFDRGSDNHRRYSYFAKNTPRDETVNAEMHSHVLMDKSNGNRGSAWTPNVEKDPCVEASQGEKSEESARRKKWN 240 FRRRIIGRIGHRAKGEDVCEEANKAAQPTIQSSTRSSTHHPANPSTEENNFVVYKVPRYLKKKNIKCPFVYRKVFFGKYG 320 IINYDLKGNKKGTLVITFHGLNGTNLTFLDIQKTLVKYKYQVLNFDLYGHGLSACPKYNHRKKTYGINFFLTQTEELLTH 400 LKLLHKDFYLIGFSMGCVIAISFAKKYIKQVKKIILISPVGILEKKPFALKVLKLFPFLINISSFFMLPCFISKKNFKKA 480 PKGASKKRQKSGNKEDPQCDTNDAYKDATDKSLEQDTQDDSDNDTSDYLYNRIMWQAFVKKNITHSILGCINNLKMWSAH 560 DIFKEVGLHHIPVLILCGEKDNICSVHVFKNTSKFFINCHMIIFRNASHLVLVEKSKEINSCVLTFFHFPNNADLKTVHH 640 MFPVDTLGNSVLCQRGDLL 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_1320400 2 -----MR|SE 0.181 . PKNH_1320400 19 TEEVEEK|EE 0.061 . PKNH_1320400 29 NTIVMEK|RK 0.054 . PKNH_1320400 30 TIVMEKR|KK 0.175 . PKNH_1320400 31 IVMEKRK|KY 0.124 . PKNH_1320400 32 VMEKRKK|YF 0.087 . PKNH_1320400 42 ILSSEQK|DT 0.083 . PKNH_1320400 49 DTHSDDR|IE 0.094 . PKNH_1320400 76 QEEEEER|KK 0.074 . PKNH_1320400 77 EEEEERK|KQ 0.062 . PKNH_1320400 78 EEEERKK|QK 0.087 . PKNH_1320400 80 EERKKQK|RD 0.073 . PKNH_1320400 81 ERKKQKR|DK 0.340 . PKNH_1320400 83 KKQKRDK|KK 0.086 . PKNH_1320400 84 KQKRDKK|KD 0.270 . PKNH_1320400 85 QKRDKKK|DD 0.187 . PKNH_1320400 96 PLLVVNK|KG 0.056 . PKNH_1320400 97 LLVVNKK|GT 0.123 . PKNH_1320400 102 KKGTIPK|DD 0.091 . PKNH_1320400 106 IPKDDDR|AK 0.112 . PKNH_1320400 108 KDDDRAK|NQ 0.059 . PKNH_1320400 126 SPEETSR|KG 0.074 . PKNH_1320400 127 PEETSRK|GC 0.072 . PKNH_1320400 132 RKGCLLK|GE 0.071 . PKNH_1320400 135 CLLKGER|KY 0.068 . PKNH_1320400 136 LLKGERK|YL 0.079 . PKNH_1320400 142 KYLLALK|SI 0.072 . PKNH_1320400 146 ALKSIIR|TR 0.068 . PKNH_1320400 148 KSIIRTR|DG 0.116 . PKNH_1320400 151 IRTRDGR|HA 0.370 . PKNH_1320400 170 SGGCFDR|GS 0.127 . PKNH_1320400 176 RGSDNHR|RY 0.095 . PKNH_1320400 177 GSDNHRR|YS 0.174 . PKNH_1320400 183 RYSYFAK|NT 0.083 . PKNH_1320400 187 FAKNTPR|DE 0.106 . PKNH_1320400 203 SHVLMDK|SN 0.086 . PKNH_1320400 208 DKSNGNR|GS 0.095 . PKNH_1320400 218 WTPNVEK|DP 0.066 . PKNH_1320400 229 EASQGEK|SE 0.080 . PKNH_1320400 235 KSEESAR|RK 0.085 . PKNH_1320400 236 SEESARR|KK 0.129 . PKNH_1320400 237 EESARRK|KW 0.087 . PKNH_1320400 238 ESARRKK|WN 0.283 . PKNH_1320400 242 RKKWNFR|RR 0.095 . PKNH_1320400 243 KKWNFRR|RI 0.170 . PKNH_1320400 244 KWNFRRR|II 0.337 . PKNH_1320400 248 RRRIIGR|IG 0.110 . PKNH_1320400 252 IGRIGHR|AK 0.090 . PKNH_1320400 254 RIGHRAK|GE 0.084 . PKNH_1320400 264 VCEEANK|AA 0.069 . PKNH_1320400 275 TIQSSTR|SS 0.160 . PKNH_1320400 295 NNFVVYK|VP 0.060 . PKNH_1320400 298 VVYKVPR|YL 0.110 . PKNH_1320400 301 KVPRYLK|KK 0.092 . PKNH_1320400 302 VPRYLKK|KN 0.114 . PKNH_1320400 303 PRYLKKK|NI 0.108 . PKNH_1320400 306 LKKKNIK|CP 0.069 . PKNH_1320400 312 KCPFVYR|KV 0.119 . PKNH_1320400 313 CPFVYRK|VF 0.090 . PKNH_1320400 318 RKVFFGK|YG 0.074 . PKNH_1320400 327 IINYDLK|GN 0.069 . PKNH_1320400 330 YDLKGNK|KG 0.054 . PKNH_1320400 331 DLKGNKK|GT 0.100 . PKNH_1320400 353 TFLDIQK|TL 0.059 . PKNH_1320400 357 IQKTLVK|YK 0.070 . PKNH_1320400 359 KTLVKYK|YQ 0.062 . PKNH_1320400 377 GLSACPK|YN 0.084 . PKNH_1320400 381 CPKYNHR|KK 0.095 . PKNH_1320400 382 PKYNHRK|KT 0.105 . PKNH_1320400 383 KYNHRKK|TY 0.164 . PKNH_1320400 402 ELLTHLK|LL 0.058 . PKNH_1320400 406 HLKLLHK|DF 0.070 . PKNH_1320400 425 IAISFAK|KY 0.072 . PKNH_1320400 426 AISFAKK|YI 0.203 . PKNH_1320400 429 FAKKYIK|QV 0.084 . PKNH_1320400 432 KYIKQVK|KI 0.067 . PKNH_1320400 433 YIKQVKK|II 0.109 . PKNH_1320400 445 PVGILEK|KP 0.056 . PKNH_1320400 446 VGILEKK|PF 0.073 . PKNH_1320400 451 KKPFALK|VL 0.052 . PKNH_1320400 454 FALKVLK|LF 0.054 . PKNH_1320400 474 LPCFISK|KN 0.065 . PKNH_1320400 475 PCFISKK|NF 0.099 . PKNH_1320400 478 ISKKNFK|KA 0.076 . PKNH_1320400 479 SKKNFKK|AP 0.102 . PKNH_1320400 482 NFKKAPK|GA 0.088 . PKNH_1320400 486 APKGASK|KR 0.064 . PKNH_1320400 487 PKGASKK|RQ 0.088 . PKNH_1320400 488 KGASKKR|QK 0.288 . PKNH_1320400 490 ASKKRQK|SG 0.095 . PKNH_1320400 494 RQKSGNK|ED 0.058 . PKNH_1320400 506 DTNDAYK|DA 0.082 . PKNH_1320400 511 YKDATDK|SL 0.081 . PKNH_1320400 532 SDYLYNR|IM 0.088 . PKNH_1320400 540 MWQAFVK|KN 0.066 . PKNH_1320400 541 WQAFVKK|NI 0.135 . PKNH_1320400 555 GCINNLK|MW 0.066 . PKNH_1320400 564 SAHDIFK|EV 0.086 . PKNH_1320400 580 LILCGEK|DN 0.062 . PKNH_1320400 590 CSVHVFK|NT 0.075 . PKNH_1320400 594 VFKNTSK|FF 0.065 . PKNH_1320400 605 CHMIIFR|NA 0.106 . PKNH_1320400 615 HLVLVEK|SK 0.079 . PKNH_1320400 617 VLVEKSK|EI 0.071 . PKNH_1320400 636 PNNADLK|TV 0.090 . PKNH_1320400 655 NSVLCQR|GD 0.072 . ____________________________^_________________

  • Fasta :-

    >PKNH_1320400 ATGAGAAGTGAAGAAGATGCTGGAAATGTAGGAATCACTGAAGAAGTTGAAGAAAAGGAA GAATGCAACACAATCGTAATGGAGAAACGGAAGAAATATTTCCAAATTTTGTCAAGTGAA CAAAAGGACACACATTCGGATGATCGTATAGAACAACCCCAACTGAATCATGGGGGGGTG TTCCCCGAAGATACATCACCACATTCCCAAGAAGAGGAGGAAGAAAGAAAGAAGCAAAAA CGAGATAAAAAAAAGGATGATAGTTATCCCCTCCTCGTAGTAAACAAAAAGGGGACAATA CCAAAGGATGATGATCGTGCAAAGAATCAAATGCTCACAACAGAAGAAGTAATAAACAGC CCCGAGGAAACATCTCGAAAGGGATGCCTGCTAAAAGGTGAAAGAAAATATCTGCTCGCG CTGAAAAGCATAATTAGGACAAGGGATGGTCGGCACGCAAACGGCGCGAATGGGGAAAGT GGTAATCACAGCGGTGGATGCTTCGACCGCGGAAGCGACAACCACAGAAGATACAGTTAC TTCGCAAAGAACACCCCGCGGGACGAAACCGTAAATGCAGAAATGCACTCCCATGTATTA ATGGACAAGTCGAATGGCAATAGGGGCTCCGCATGGACCCCCAATGTGGAGAAAGACCCG TGTGTAGAAGCCAGTCAGGGAGAGAAGAGCGAAGAAAGCGCAAGGAGAAAGAAATGGAAC TTTAGGCGCAGGATTATTGGCAGGATTGGACACAGAGCGAAGGGGGAAGATGTGTGTGAG GAGGCCAACAAAGCAGCGCAACCAACGATTCAATCATCGACGCGGTCATCCACGCACCAC CCTGCTAACCCATCCACCGAGGAAAACAATTTTGTCGTATACAAAGTGCCAAGGTACCTG AAGAAAAAAAACATCAAGTGCCCTTTCGTCTACAGGAAGGTCTTCTTTGGAAAATACGGA ATAATAAATTATGATTTGAAAGGAAACAAAAAGGGCACGCTCGTCATAACATTTCATGGA CTGAACGGAACAAACTTAACTTTCCTCGACATACAGAAAACGCTAGTCAAATATAAGTAC CAGGTTCTCAACTTTGATTTGTATGGGCATGGATTATCTGCCTGTCCCAAATATAATCAC CGAAAAAAAACCTACGGAATAAATTTTTTTTTAACACAGACGGAGGAATTGCTTACCCAT TTAAAATTACTACATAAGGATTTTTATCTGATAGGTTTTTCCATGGGCTGCGTAATTGCC ATCAGCTTTGCAAAGAAGTATATAAAACAGGTGAAGAAAATTATTTTGATATCCCCTGTT GGCATTTTGGAGAAAAAGCCCTTTGCCCTAAAGGTTCTAAAGTTGTTCCCCTTCCTGATC AACATTTCCTCCTTTTTTATGTTGCCTTGTTTTATTTCCAAGAAAAATTTTAAGAAAGCG CCCAAAGGTGCTTCTAAGAAGAGGCAAAAAAGTGGCAACAAAGAGGACCCCCAGTGTGAC ACCAATGATGCCTATAAAGATGCTACAGACAAATCGCTCGAACAGGATACCCAAGACGAC TCCGATAACGACACTTCCGACTACCTGTACAACCGAATCATGTGGCAGGCTTTTGTGAAA AAAAATATCACCCATTCAATATTGGGCTGCATTAACAACTTAAAAATGTGGAGTGCGCAT GACATATTCAAAGAAGTCGGACTGCATCATATACCCGTCCTAATTCTCTGCGGAGAGAAA GACAACATCTGTAGCGTCCACGTTTTCAAGAATACGTCCAAATTTTTCATCAATTGCCAC ATGATAATTTTTAGGAATGCCTCTCATTTAGTTTTGGTAGAGAAGAGCAAAGAAATTAAC TCCTGTGTGTTGACATTCTTCCACTTCCCCAACAACGCTGATTTGAAGACCGTCCATCAC ATGTTTCCTGTGGACACTCTGGGGAATTCCGTCCTCTGTCAGCGGGGCGACCTTTTATGA
  • Download Fasta

  • Fasta :-

    MRSEEDAGNVGITEEVEEKEECNTIVMEKRKKYFQILSSEQKDTHSDDRIEQPQLNHGGV FPEDTSPHSQEEEEERKKQKRDKKKDDSYPLLVVNKKGTIPKDDDRAKNQMLTTEEVINS PEETSRKGCLLKGERKYLLALKSIIRTRDGRHANGANGESGNHSGGCFDRGSDNHRRYSY FAKNTPRDETVNAEMHSHVLMDKSNGNRGSAWTPNVEKDPCVEASQGEKSEESARRKKWN FRRRIIGRIGHRAKGEDVCEEANKAAQPTIQSSTRSSTHHPANPSTEENNFVVYKVPRYL KKKNIKCPFVYRKVFFGKYGIINYDLKGNKKGTLVITFHGLNGTNLTFLDIQKTLVKYKY QVLNFDLYGHGLSACPKYNHRKKTYGINFFLTQTEELLTHLKLLHKDFYLIGFSMGCVIA ISFAKKYIKQVKKIILISPVGILEKKPFALKVLKLFPFLINISSFFMLPCFISKKNFKKA PKGASKKRQKSGNKEDPQCDTNDAYKDATDKSLEQDTQDDSDNDTSDYLYNRIMWQAFVK KNITHSILGCINNLKMWSAHDIFKEVGLHHIPVLILCGEKDNICSVHVFKNTSKFFINCH MIIFRNASHLVLVEKSKEINSCVLTFFHFPNNADLKTVHHMFPVDTLGNSVLCQRGDLL

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PKNH_1320400120 SEVINSPEET0.997unspPKNH_1320400120 SEVINSPEET0.997unspPKNH_1320400120 SEVINSPEET0.997unspPKNH_1320400185 TFAKNTPRDE0.992unspPKNH_1320400230 SQGEKSEESA0.996unspPKNH_1320400233 SKSEESARRK0.991unspPKNH_1320400277 SSTRSSTHHP0.993unspPKNH_1320400485 SPKGASKKRQ0.996unspPKNH_1320400491 SKRQKSGNKE0.996unspPKNH_1320400521 STQDDSDNDT0.995unspPKNH_132040066 SPEDTSPHSQ0.991unspPKNH_132040069 STSPHSQEEE0.998unsp

PK8_2800c      PKH_050460      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India