PKNH_1328500 | plasmepsin IX, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0004190      

  • Computed_GO_Functions:  aspartic-type endopeptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:  GO:0020008      

  • Curated_GO_Components:  rhoptry      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PKNH_1328500OTHER0.6217860.3505830.027631
No Results

  • Fasta :-

    >PKNH_1328500 MPPHRFQKLGNRLLSTLLIHPKASLLFVVHLFLFRQGTCLRPSGSNTFATDLTWEEGRKL DLPTCNTCDADDACSVCIHEKGESENIIPMVAIPSKRKYLQEKIEKIKSELHQNLPEQKW KKKKKKESYSFFEGEDDDKGEVDEEEGDSTSHATMDNQIFHHNKGTHYEGEDKHPDEFQK CATSDCHMNKDASGIPDYLRHFMDGSEEKAQTSWSSWSSAFKKKEVSSSTDQVTLPLQQL QDSQYVGYIQIGNPPQTIRPIFDTGSTNIWVVSTKCKDDTCLKVHRYDYKLSKSFRYYKP RTNLDIMFGTGIIQGVIGVENFRIGPFKLFNQPFGLVKREKRSEAKSNVFERINFEGIVG LAFPAMLSTGKTTIYENLMDTYKLSHNEFSIYIGKDNKHSALIFGGVDRRFFEGDIYMFP VVKEYYWEIEFDGLYIDHQKFCCDSSSIVYDMRKKEKKKGKVHRNSFVRKYLKKKTDLMN MSSVWHHRREGAEVDSKEDQSGIDLSEEEKDGEHSIRGEVNTYGVHPGRHGKGVHSRQQR RHRRHGWRRHMRRVNHRGKDNKLKKNKNYLIFDSGTSYNSVPKSEIKYFFKILPSKKCDD SNIEEVVASYPNLTYVINNMPFTLTPAQYLVRKSNMCKPAFMEIEVSPEYGHAYILGNAT FMRYYYTVYRRGDGNKSSYVGIAKAVHAEDNEEYLTNLQRKMNQME
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_1328500.fa Sequence name : PKNH_1328500 Sequence length : 706 VALUES OF COMPUTED PARAMETERS Coef20 : 3.823 CoefTot : -0.793 ChDiff : 13 ZoneTo : 50 KR : 6 DE : 0 CleavSite : 43 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.288 1.788 0.089 0.645 MesoH : -0.665 0.198 -0.376 0.188 MuHd_075 : 34.441 27.321 10.068 8.269 MuHd_095 : 37.605 25.567 11.223 9.605 MuHd_100 : 38.530 21.202 10.242 9.181 MuHd_105 : 39.287 16.881 9.027 8.628 Hmax_075 : 16.500 20.700 3.611 6.240 Hmax_095 : 18.700 17.325 3.702 6.388 Hmax_100 : 11.300 11.500 1.922 5.220 Hmax_105 : 12.367 12.833 1.922 5.075 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.1295 0.8705 DFMC : 0.1773 0.8227 This protein is probably imported in mitochondria. f(Ser) = 0.0800 f(Arg) = 0.0800 CMi = 0.43956 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 706 PKNH_1328500 MPPHRFQKLGNRLLSTLLIHPKASLLFVVHLFLFRQGTCLRPSGSNTFATDLTWEEGRKLDLPTCNTCDADDACSVCIHE 80 KGESENIIPMVAIPSKRKYLQEKIEKIKSELHQNLPEQKWKKKKKKESYSFFEGEDDDKGEVDEEEGDSTSHATMDNQIF 160 HHNKGTHYEGEDKHPDEFQKCATSDCHMNKDASGIPDYLRHFMDGSEEKAQTSWSSWSSAFKKKEVSSSTDQVTLPLQQL 240 QDSQYVGYIQIGNPPQTIRPIFDTGSTNIWVVSTKCKDDTCLKVHRYDYKLSKSFRYYKPRTNLDIMFGTGIIQGVIGVE 320 NFRIGPFKLFNQPFGLVKREKRSEAKSNVFERINFEGIVGLAFPAMLSTGKTTIYENLMDTYKLSHNEFSIYIGKDNKHS 400 ALIFGGVDRRFFEGDIYMFPVVKEYYWEIEFDGLYIDHQKFCCDSSSIVYDMRKKEKKKGKVHRNSFVRKYLKKKTDLMN 480 MSSVWHHRREGAEVDSKEDQSGIDLSEEEKDGEHSIRGEVNTYGVHPGRHGKGVHSRQQRRHRRHGWRRHMRRVNHRGKD 560 NKLKKNKNYLIFDSGTSYNSVPKSEIKYFFKILPSKKCDDSNIEEVVASYPNLTYVINNMPFTLTPAQYLVRKSNMCKPA 640 FMEIEVSPEYGHAYILGNATFMRYYYTVYRRGDGNKSSYVGIAKAVHAEDNEEYLTNLQRKMNQME 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 .....................P.......................................................... 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 .................................................................. 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ PKNH_1328500 5 --MPPHR|FQ 0.090 . PKNH_1328500 8 PPHRFQK|LG 0.154 . PKNH_1328500 12 FQKLGNR|LL 0.086 . PKNH_1328500 22 TLLIHPK|AS 0.062 . PKNH_1328500 35 VHLFLFR|QG 0.070 . PKNH_1328500 41 RQGTCLR|PS 0.091 . PKNH_1328500 58 LTWEEGR|KL 0.077 . PKNH_1328500 59 TWEEGRK|LD 0.065 . PKNH_1328500 81 SVCIHEK|GE 0.070 . PKNH_1328500 96 MVAIPSK|RK 0.066 . PKNH_1328500 97 VAIPSKR|KY 0.156 . PKNH_1328500 98 AIPSKRK|YL 0.095 . PKNH_1328500 103 RKYLQEK|IE 0.062 . PKNH_1328500 106 LQEKIEK|IK 0.060 . PKNH_1328500 108 EKIEKIK|SE 0.073 . PKNH_1328500 119 QNLPEQK|WK 0.062 . PKNH_1328500 121 LPEQKWK|KK 0.080 . PKNH_1328500 122 PEQKWKK|KK 0.103 . PKNH_1328500 123 EQKWKKK|KK 0.104 . PKNH_1328500 124 QKWKKKK|KK 0.124 . PKNH_1328500 125 KWKKKKK|KE 0.162 . PKNH_1328500 126 WKKKKKK|ES 0.151 . PKNH_1328500 139 EGEDDDK|GE 0.061 . PKNH_1328500 164 QIFHHNK|GT 0.088 . PKNH_1328500 173 HYEGEDK|HP 0.061 . PKNH_1328500 180 HPDEFQK|CA 0.076 . PKNH_1328500 190 SDCHMNK|DA 0.125 . PKNH_1328500 200 GIPDYLR|HF 0.086 . PKNH_1328500 209 MDGSEEK|AQ 0.061 . PKNH_1328500 222 SWSSAFK|KK 0.073 . PKNH_1328500 223 WSSAFKK|KE 0.102 . PKNH_1328500 224 SSAFKKK|EV 0.354 . PKNH_1328500 259 NPPQTIR|PI 0.122 . PKNH_1328500 275 IWVVSTK|CK 0.067 . PKNH_1328500 277 VVSTKCK|DD 0.076 . PKNH_1328500 283 KDDTCLK|VH 0.051 . PKNH_1328500 286 TCLKVHR|YD 0.095 . PKNH_1328500 290 VHRYDYK|LS 0.062 . PKNH_1328500 293 YDYKLSK|SF 0.076 . PKNH_1328500 296 KLSKSFR|YY 0.142 . PKNH_1328500 299 KSFRYYK|PR 0.106 . PKNH_1328500 301 FRYYKPR|TN 0.135 . PKNH_1328500 323 IGVENFR|IG 0.071 . PKNH_1328500 328 FRIGPFK|LF 0.072 . PKNH_1328500 338 QPFGLVK|RE 0.060 . PKNH_1328500 339 PFGLVKR|EK 0.148 . PKNH_1328500 341 GLVKREK|RS 0.072 . PKNH_1328500 342 LVKREKR|SE 0.696 *ProP* PKNH_1328500 346 EKRSEAK|SN 0.084 . PKNH_1328500 352 KSNVFER|IN 0.160 . PKNH_1328500 371 AMLSTGK|TT 0.060 . PKNH_1328500 383 NLMDTYK|LS 0.063 . PKNH_1328500 395 FSIYIGK|DN 0.069 . PKNH_1328500 398 YIGKDNK|HS 0.062 . PKNH_1328500 409 IFGGVDR|RF 0.087 . PKNH_1328500 410 FGGVDRR|FF 0.166 . PKNH_1328500 423 YMFPVVK|EY 0.061 . PKNH_1328500 440 LYIDHQK|FC 0.067 . PKNH_1328500 453 SIVYDMR|KK 0.092 . PKNH_1328500 454 IVYDMRK|KE 0.074 . PKNH_1328500 455 VYDMRKK|EK 0.083 . PKNH_1328500 457 DMRKKEK|KK 0.086 . PKNH_1328500 458 MRKKEKK|KG 0.127 . PKNH_1328500 459 RKKEKKK|GK 0.112 . PKNH_1328500 461 KEKKKGK|VH 0.071 . PKNH_1328500 464 KKGKVHR|NS 0.108 . PKNH_1328500 469 HRNSFVR|KY 0.111 . PKNH_1328500 470 RNSFVRK|YL 0.206 . PKNH_1328500 473 FVRKYLK|KK 0.065 . PKNH_1328500 474 VRKYLKK|KT 0.118 . PKNH_1328500 475 RKYLKKK|TD 0.096 . PKNH_1328500 488 SSVWHHR|RE 0.133 . PKNH_1328500 489 SVWHHRR|EG 0.129 . PKNH_1328500 497 GAEVDSK|ED 0.061 . PKNH_1328500 510 DLSEEEK|DG 0.082 . PKNH_1328500 517 DGEHSIR|GE 0.088 . PKNH_1328500 529 YGVHPGR|HG 0.085 . PKNH_1328500 532 HPGRHGK|GV 0.355 . PKNH_1328500 537 GKGVHSR|QQ 0.135 . PKNH_1328500 540 VHSRQQR|RH 0.251 . PKNH_1328500 541 HSRQQRR|HR 0.190 . PKNH_1328500 543 RQQRRHR|RH 0.325 . PKNH_1328500 544 QQRRHRR|HG 0.420 . PKNH_1328500 548 HRRHGWR|RH 0.100 . PKNH_1328500 549 RRHGWRR|HM 0.257 . PKNH_1328500 552 GWRRHMR|RV 0.486 . PKNH_1328500 553 WRRHMRR|VN 0.241 . PKNH_1328500 557 MRRVNHR|GK 0.164 . PKNH_1328500 559 RVNHRGK|DN 0.071 . PKNH_1328500 562 HRGKDNK|LK 0.064 . PKNH_1328500 564 GKDNKLK|KN 0.066 . PKNH_1328500 565 KDNKLKK|NK 0.115 . PKNH_1328500 567 NKLKKNK|NY 0.061 . PKNH_1328500 583 SYNSVPK|SE 0.089 . PKNH_1328500 587 VPKSEIK|YF 0.085 . PKNH_1328500 591 EIKYFFK|IL 0.063 . PKNH_1328500 596 FKILPSK|KC 0.064 . PKNH_1328500 597 KILPSKK|CD 0.097 . PKNH_1328500 632 PAQYLVR|KS 0.082 . PKNH_1328500 633 AQYLVRK|SN 0.118 . PKNH_1328500 638 RKSNMCK|PA 0.091 . PKNH_1328500 663 GNATFMR|YY 0.143 . PKNH_1328500 670 YYYTVYR|RG 0.075 . PKNH_1328500 671 YYTVYRR|GD 0.127 . PKNH_1328500 676 RRGDGNK|SS 0.096 . PKNH_1328500 684 SYVGIAK|AV 0.092 . PKNH_1328500 700 YLTNLQR|KM 0.086 . PKNH_1328500 701 LTNLQRK|MN 0.101 . ____________________________^_________________

  • Fasta :-

    >PKNH_1328500 ATGCCCCCCCACCGTTTCCAAAAACTGGGGAACAGGCTCCTCTCGACCTTGTTAATTCAC CCCAAGGCATCCCTGCTGTTTGTAGTACATCTTTTCCTTTTTAGACAAGGCACCTGCTTA CGGCCTAGTGGAAGCAACACATTCGCAACTGACCTAACATGGGAGGAAGGGAGGAAGTTA GACTTGCCAACATGTAACACGTGTGACGCGGATGATGCCTGTTCCGTGTGTATCCATGAG AAGGGAGAGTCTGAGAATATAATCCCCATGGTGGCCATCCCAAGCAAGCGCAAATATCTT CAAGAGAAAATTGAGAAAATAAAATCAGAGCTTCACCAAAATTTACCTGAGCAGAAATGG AAGAAAAAAAAGAAAAAAGAATCTTACAGTTTTTTTGAAGGGGAAGACGATGACAAGGGG GAGGTGGACGAAGAAGAAGGAGATTCCACTTCCCACGCGACGATGGACAACCAGATTTTC CATCATAACAAAGGAACCCATTACGAAGGGGAAGACAAGCACCCCGATGAGTTTCAAAAA TGCGCCACTTCGGATTGTCACATGAATAAGGATGCTTCTGGAATTCCTGATTACCTTAGG CACTTTATGGATGGCTCAGAGGAGAAGGCCCAGACATCGTGGAGCAGTTGGAGCAGTGCC TTTAAAAAGAAGGAGGTTTCCTCTTCTACCGACCAAGTGACCCTACCCCTCCAGCAATTG CAAGATAGCCAATACGTTGGGTATATCCAAATAGGCAACCCACCGCAAACGATCAGACCC ATATTTGACACCGGGAGCACGAACATCTGGGTCGTGAGCACCAAGTGCAAGGATGACACT TGTCTGAAGGTGCACCGGTACGACTACAAGCTATCTAAGAGCTTCCGCTACTACAAGCCG CGCACGAATCTGGATATCATGTTTGGCACGGGAATAATCCAAGGCGTGATCGGTGTGGAG AACTTCCGCATAGGACCGTTCAAGTTATTCAACCAACCCTTCGGTCTCGTAAAGCGCGAG AAAAGGAGTGAAGCAAAGTCAAACGTCTTTGAGAGAATTAACTTCGAAGGCATAGTTGGG TTGGCATTCCCAGCAATGCTATCGACAGGAAAAACAACCATCTATGAAAACCTTATGGAC ACATATAAGCTCAGCCATAACGAGTTCTCTATATATATAGGAAAAGACAATAAACATTCA GCTTTAATTTTTGGAGGAGTGGACAGACGCTTTTTCGAGGGAGACATTTATATGTTTCCA GTGGTAAAAGAATACTACTGGGAAATAGAATTTGACGGACTGTACATTGATCATCAGAAA TTTTGTTGTGATTCCAGTTCCATTGTTTACGACATGAGAAAGAAAGAAAAAAAAAAAGGG AAAGTGCACAGAAATTCTTTTGTGAGGAAATACTTGAAAAAAAAAACTGACTTGATGAAT ATGTCGAGTGTTTGGCACCACCGTCGGGAAGGCGCAGAAGTAGACTCAAAGGAGGATCAA TCAGGGATAGATCTCTCTGAGGAGGAGAAAGATGGAGAACATTCCATCAGGGGCGAAGTA AACACATATGGTGTTCATCCGGGAAGACATGGTAAAGGGGTACACAGCCGACAGCAGAGG CGACACAGGCGACATGGATGGAGAAGACACATGAGAAGAGTCAACCACCGAGGAAAGGAT AATAAATTGAAGAAAAACAAAAACTACCTCATCTTCGATTCTGGGACATCTTACAATAGT GTTCCTAAGTCGGAGATCAAGTACTTCTTCAAGATCCTTCCTTCGAAGAAATGTGACGAC AGCAACATAGAGGAAGTAGTGGCTAGTTACCCTAACCTGACCTACGTCATTAACAACATG CCCTTCACGCTGACGCCGGCGCAGTACCTTGTCCGGAAGTCCAACATGTGCAAGCCGGCG TTCATGGAAATAGAAGTTTCGCCTGAATATGGCCACGCATACATTTTGGGGAATGCGACT TTCATGAGATACTACTACACCGTCTACAGACGCGGAGATGGGAACAAGAGCTCCTACGTG GGCATTGCAAAGGCAGTGCACGCAGAAGACAATGAGGAGTATCTGACCAACCTGCAGAGG AAGATGAACCAAATGGAGTAG
  • Download Fasta

  • Fasta :-

    MPPHRFQKLGNRLLSTLLIHPKASLLFVVHLFLFRQGTCLRPSGSNTFATDLTWEEGRKL DLPTCNTCDADDACSVCIHEKGESENIIPMVAIPSKRKYLQEKIEKIKSELHQNLPEQKW KKKKKKESYSFFEGEDDDKGEVDEEEGDSTSHATMDNQIFHHNKGTHYEGEDKHPDEFQK CATSDCHMNKDASGIPDYLRHFMDGSEEKAQTSWSSWSSAFKKKEVSSSTDQVTLPLQQL QDSQYVGYIQIGNPPQTIRPIFDTGSTNIWVVSTKCKDDTCLKVHRYDYKLSKSFRYYKP RTNLDIMFGTGIIQGVIGVENFRIGPFKLFNQPFGLVKREKRSEAKSNVFERINFEGIVG LAFPAMLSTGKTTIYENLMDTYKLSHNEFSIYIGKDNKHSALIFGGVDRRFFEGDIYMFP VVKEYYWEIEFDGLYIDHQKFCCDSSSIVYDMRKKEKKKGKVHRNSFVRKYLKKKTDLMN MSSVWHHRREGAEVDSKEDQSGIDLSEEEKDGEHSIRGEVNTYGVHPGRHGKGVHSRQQR RHRRHGWRRHMRRVNHRGKDNKLKKNKNYLIFDSGTSYNSVPKSEIKYFFKILPSKKCDD SNIEEVVASYPNLTYVINNMPFTLTPAQYLVRKSNMCKPAFMEIEVSPEYGHAYILGNAT FMRYYYTVYRRGDGNKSSYVGIAKAVHAEDNEEYLTNLQRKMNQME

  • title: Active site flap
  • coordinates: D305,I306,M307,F308,I312,I313,Q314,G315
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PKNH_1328500130 SKESYSFFEG0.991unspPKNH_1328500130 SKESYSFFEG0.991unspPKNH_1328500130 SKESYSFFEG0.991unspPKNH_1328500228 SKEVSSSTDQ0.997unspPKNH_1328500496 SAEVDSKEDQ0.998unspPKNH_1328500501 SKEDQSGIDL0.995unspPKNH_1328500506 SGIDLSEEEK0.995unspPKNH_1328500515 SDGEHSIRGE0.99unspPKNH_132850043 SCLRPSGSNT0.996unspPKNH_1328500128 SKKKESYSFF0.992unsp

PK14_1290w      PKH_132010      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India