PKNH_1333400 | enoyl-CoA hydratase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0003824      

  • Computed_GO_Functions:  catalytic activity      

  • Computed_GO_Process_IDs:  GO:0008152      

  • Computed_GO_Processes:  metabolic process      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PKNH_1333400OTHER0.6911380.0140420.294820
No Results

  • Fasta :-

    >PKNH_1333400 MATGRLLLPWLQVDYSFHGYRPITPSMATGRLLLPWLQVDYSFHGYRSITSSMAKGRLLL PFLSSSTAVCPMAMLSRRRSFSKFLMIKTTNGVFREGAPKFGSLPRRYKSTTTNEPEDSP IQEESNHHFNHHRYVDFYRDESMSIGIVRFRNTINGKKNIFGDFLDELRNVIEHVTNIIS NEETNAFYIKEFPQKDNYMVKNLRNRIPYVDNRLKVLILTWDNAKTQGQTTTISSTPDYN SFLKNDEQLNIELSNSFRYLCNTIQHLPLITISTINGQCYNSGMDLLLSTDFKLSSEQST FGFNKTHLGLFPYGGSTQKLFRTIPMSYAKHLLLTGDTISAKDALRINLIDICMNENEDH FINTSCVHFDTKFTKTQKIEILKKSVLTFFADIFSNELFAHKTNDSSFVFSLFFAFQFFF IPTNSLQSIKMSIMEGMSLSEPNLYLDHDRAVFERNVNAPQRGEILAYLKRTINNPTPTP T
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_1333400.fa Sequence name : PKNH_1333400 Sequence length : 481 VALUES OF COMPUTED PARAMETERS Coef20 : 3.644 CoefTot : -1.410 ChDiff : 7 ZoneTo : 114 KR : 16 DE : 3 CleavSite : 109 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.224 1.724 0.289 0.746 MesoH : 0.001 0.438 -0.266 0.273 MuHd_075 : 41.865 26.737 11.131 7.840 MuHd_095 : 43.366 23.465 10.324 9.952 MuHd_100 : 38.747 23.132 9.879 9.425 MuHd_105 : 36.781 20.300 9.422 8.417 Hmax_075 : 9.013 22.867 1.602 4.600 Hmax_095 : 14.800 10.762 2.157 5.460 Hmax_100 : 14.800 17.000 1.667 5.460 Hmax_105 : -3.200 -0.100 1.387 1.380 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0409 0.9591 DFMC : 0.0055 0.9945 This protein is probably imported in mitochondria. f(Ser) = 0.1228 f(Arg) = 0.0965 CMi = 0.59880 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 481 PKNH_1333400 MATGRLLLPWLQVDYSFHGYRPITPSMATGRLLLPWLQVDYSFHGYRSITSSMAKGRLLLPFLSSSTAVCPMAMLSRRRS 80 FSKFLMIKTTNGVFREGAPKFGSLPRRYKSTTTNEPEDSPIQEESNHHFNHHRYVDFYRDESMSIGIVRFRNTINGKKNI 160 FGDFLDELRNVIEHVTNIISNEETNAFYIKEFPQKDNYMVKNLRNRIPYVDNRLKVLILTWDNAKTQGQTTTISSTPDYN 240 SFLKNDEQLNIELSNSFRYLCNTIQHLPLITISTINGQCYNSGMDLLLSTDFKLSSEQSTFGFNKTHLGLFPYGGSTQKL 320 FRTIPMSYAKHLLLTGDTISAKDALRINLIDICMNENEDHFINTSCVHFDTKFTKTQKIEILKKSVLTFFADIFSNELFA 400 HKTNDSSFVFSLFFAFQFFFIPTNSLQSIKMSIMEGMSLSEPNLYLDHDRAVFERNVNAPQRGEILAYLKRTINNPTPTP 480 T 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 . 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_1333400 5 --MATGR|LL 0.083 . PKNH_1333400 21 YSFHGYR|PI 0.120 . PKNH_1333400 31 PSMATGR|LL 0.092 . PKNH_1333400 47 YSFHGYR|SI 0.147 . PKNH_1333400 55 ITSSMAK|GR 0.061 . PKNH_1333400 57 SSMAKGR|LL 0.125 . PKNH_1333400 77 PMAMLSR|RR 0.077 . PKNH_1333400 78 MAMLSRR|RS 0.154 . PKNH_1333400 79 AMLSRRR|SF 0.248 . PKNH_1333400 83 RRRSFSK|FL 0.099 . PKNH_1333400 88 SKFLMIK|TT 0.069 . PKNH_1333400 95 TTNGVFR|EG 0.136 . PKNH_1333400 100 FREGAPK|FG 0.064 . PKNH_1333400 106 KFGSLPR|RY 0.077 . PKNH_1333400 107 FGSLPRR|YK 0.238 . PKNH_1333400 109 SLPRRYK|ST 0.329 . PKNH_1333400 133 HHFNHHR|YV 0.195 . PKNH_1333400 139 RYVDFYR|DE 0.132 . PKNH_1333400 149 MSIGIVR|FR 0.100 . PKNH_1333400 151 IGIVRFR|NT 0.099 . PKNH_1333400 157 RNTINGK|KN 0.060 . PKNH_1333400 158 NTINGKK|NI 0.085 . PKNH_1333400 169 DFLDELR|NV 0.083 . PKNH_1333400 190 TNAFYIK|EF 0.074 . PKNH_1333400 195 IKEFPQK|DN 0.076 . PKNH_1333400 201 KDNYMVK|NL 0.072 . PKNH_1333400 204 YMVKNLR|NR 0.073 . PKNH_1333400 206 VKNLRNR|IP 0.077 . PKNH_1333400 213 IPYVDNR|LK 0.085 . PKNH_1333400 215 YVDNRLK|VL 0.053 . PKNH_1333400 225 LTWDNAK|TQ 0.067 . PKNH_1333400 244 DYNSFLK|ND 0.063 . PKNH_1333400 258 ELSNSFR|YL 0.133 . PKNH_1333400 293 LLSTDFK|LS 0.073 . PKNH_1333400 305 STFGFNK|TH 0.061 . PKNH_1333400 319 YGGSTQK|LF 0.062 . PKNH_1333400 322 STQKLFR|TI 0.093 . PKNH_1333400 330 IPMSYAK|HL 0.069 . PKNH_1333400 342 GDTISAK|DA 0.075 . PKNH_1333400 346 SAKDALR|IN 0.076 . PKNH_1333400 372 CVHFDTK|FT 0.072 . PKNH_1333400 375 FDTKFTK|TQ 0.061 . PKNH_1333400 378 KFTKTQK|IE 0.054 . PKNH_1333400 383 QKIEILK|KS 0.053 . PKNH_1333400 384 KIEILKK|SV 0.213 . PKNH_1333400 402 NELFAHK|TN 0.059 . PKNH_1333400 430 NSLQSIK|MS 0.069 . PKNH_1333400 450 LYLDHDR|AV 0.105 . PKNH_1333400 455 DRAVFER|NV 0.191 . PKNH_1333400 462 NVNAPQR|GE 0.081 . PKNH_1333400 470 EILAYLK|RT 0.053 . PKNH_1333400 471 ILAYLKR|TI 0.169 . ____________________________^_________________

  • Fasta :-

    >PKNH_1333400 ATGGCTACAGGTCGATTACTCCTTCCATGGCTACAGGTCGATTACTCCTTCCATGGCTAC AGGCCGATTACTCCTTCCATGGCTACAGGTCGATTACTCCTTCCATGGCTACAGGTCGAT TACTCCTTCCATGGCTACAGGTCGATTACTTCTTCCATGGCTAAAGGTCGATTACTTCTT CCATTTCTTTCCTCCTCCACCGCTGTGTGCCCGATGGCAATGCTCTCGCGGAGGAGATCC TTTTCAAAGTTCCTGATGATCAAGACGACGAATGGCGTCTTTAGGGAAGGCGCCCCCAAG TTTGGCTCCTTGCCCAGGCGGTACAAAAGTACTACTACGAACGAACCGGAAGACTCACCT ATACAGGAGGAGAGCAACCACCACTTCAATCACCACAGGTATGTGGATTTTTATCGTGAT GAATCAATGAGCATTGGCATTGTACGTTTCAGAAATACTATCAATGGAAAGAAAAATATT TTTGGAGATTTTCTGGACGAGTTAAGGAATGTAATAGAACATGTCACAAATATCATCTCA AATGAGGAGACGAATGCCTTTTACATAAAAGAATTTCCACAGAAGGATAACTACATGGTG AAGAATTTGCGCAACAGGATTCCTTACGTGGACAACCGATTGAAGGTTCTTATACTTACT TGGGATAATGCAAAAACTCAGGGTCAGACTACCACCATTTCCAGTACGCCCGACTATAAT TCCTTCCTTAAAAATGATGAGCAACTGAACATAGAACTTTCCAATTCATTCCGCTACCTG TGCAACACTATCCAACATTTGCCCCTCATCACGATAAGCACAATTAACGGCCAGTGCTAC AACAGTGGAATGGACCTACTACTGTCTACGGATTTCAAATTATCAAGTGAACAGAGTACC TTTGGTTTTAACAAAACACATTTAGGGTTATTTCCCTACGGAGGAAGCACACAGAAGTTG TTCCGAACCATTCCAATGAGTTACGCAAAGCATCTCCTCCTTACAGGAGACACGATAAGC GCTAAGGATGCACTGAGGATTAACCTAATAGATATTTGTATGAATGAGAATGAAGACCAT TTTATTAATACTTCATGTGTTCATTTTGACACGAAGTTTACAAAAACACAGAAGATCGAG ATTTTAAAAAAAAGTGTTTTAACATTCTTTGCAGATATTTTCTCAAACGAATTATTTGCT CACAAGACGAATGATAGCTCTTTTGTCTTTTCTCTTTTCTTTGCCTTCCAGTTTTTTTTC ATTCCGACCAATTCTCTACAGAGTATTAAAATGAGTATCATGGAGGGCATGTCTCTCAGC GAGCCAAACTTGTACTTGGATCACGACAGGGCTGTTTTCGAGCGCAACGTCAACGCGCCT CAGAGGGGCGAAATTCTCGCTTACTTGAAGCGCACAATCAACAACCCGACCCCTACACCC ACGTAG
  • Download Fasta

  • Fasta :-

    MATGRLLLPWLQVDYSFHGYRPITPSMATGRLLLPWLQVDYSFHGYRSITSSMAKGRLLL PFLSSSTAVCPMAMLSRRRSFSKFLMIKTTNGVFREGAPKFGSLPRRYKSTTTNEPEDSP IQEESNHHFNHHRYVDFYRDESMSIGIVRFRNTINGKKNIFGDFLDELRNVIEHVTNIIS NEETNAFYIKEFPQKDNYMVKNLRNRIPYVDNRLKVLILTWDNAKTQGQTTTISSTPDYN SFLKNDEQLNIELSNSFRYLCNTIQHLPLITISTINGQCYNSGMDLLLSTDFKLSSEQST FGFNKTHLGLFPYGGSTQKLFRTIPMSYAKHLLLTGDTISAKDALRINLIDICMNENEDH FINTSCVHFDTKFTKTQKIEILKKSVLTFFADIFSNELFAHKTNDSSFVFSLFFAFQFFF IPTNSLQSIKMSIMEGMSLSEPNLYLDHDRAVFERNVNAPQRGEILAYLKRTINNPTPTP T

  • title: trimer interface
  • coordinates: N262,I270,D291,F292,K293,L294,T306,H307,L308,G309,G315,T317,Q318,K319,F321,R322,S327,Y328,K330,H331,L333,L334,D337,N348,D351
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PKNH_1333400295 SDFKLSSEQS0.991unspPKNH_1333400295 SDFKLSSEQS0.991unspPKNH_1333400295 SDFKLSSEQS0.991unspPKNH_1333400340 SGDTISAKDA0.996unspPKNH_1333400428 SNSLQSIKMS0.993unspPKNH_133340080 SSRRRSFSKF0.992unspPKNH_1333400110 SRRYKSTTTN0.992unsp

PK14_1055c      PKH_132500      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India