PKNH_1347100 | rhomboid protease ROM8, putative

  • Computed_GO_Component_IDs:  GO:0016021      

  • Computed_GO_Components:  integral component of membrane      

  • Computed_GO_Function_IDs:  GO:0004252      

  • Computed_GO_Functions:  serine-type endopeptidase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PKNH_1347100OTHER0.9999970.0000000.000003
No Results

  • Fasta :-

    >PKNH_1347100 MENNKSGENAKAFMESKDKGKKDSDDNDDDDKKGKDDKDKQNVHHKSKGGTTHRKKDGKD NNTKRSGNDNDRVQTNSRGKHSDKNGVTKGGGGAEDSKVNNDSAPPIDSNLPKNPNVTNK IERKSNSMSLSDTSARRSKDKGDRTQQKHKHKHGNAESAERRRRDAKSVKYVKDAENAKH EQGGDEVEDDKTDGETDEDEESADDSLTEEESDSDDDEEKRKNNDPSKAQYKKIEKHPTC ELLNLDRSNTIQFYNLLNGKNKEKDYNSSSSRKERYRSSNLKKEKKLKMSHTYEEFLWDH HDYTSLKVNYKITKKSHYDKTKKRPHLPIFISENKERTLNKSSICTDNAKFLNFLNDNEK NAYYYKNRKRYESRRRKQKKTNIKIKEKNQPKETLDNYIINVKEKNRYHEMMSSENVDKV KVPLEHYPSGLKTDEAYLSELQDTEQKGQMKDQERQKNYASTVEEEKKIIKEKRKIKCSI CCNRRFFIFQKKTLRKRKEKIIIFLNHNYSACENGQFNDHFYKTIHKNDLENLEEERIYI DNNKENTIKKIIYRIFPQFSIFSLILYVTFIQWVIFILLISIKSDFTLTPSNDSLKNFGS NFPHNIFKKAEFYRLFTSLFLHSNFNHICANTYVQLTVGFLLEYLYGTYVVFLVYVFTGI YGIILSSPLTYCYSTTESSSSSSGIIGIFFSEILMMTNFNVDKISISVHLFCFFLLLLFL KFSLNTVSINIYSHFFGFLGGFLIGIILKRNQLKYFLKNNLLIQILSLVFLIVSLAAAIF ISTYVVQNCPK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_1347100.fa Sequence name : PKNH_1347100 Sequence length : 791 VALUES OF COMPUTED PARAMETERS Coef20 : 2.936 CoefTot : 0.000 ChDiff : 27 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.482 3.000 0.543 0.951 MesoH : 1.145 1.495 0.106 0.577 MuHd_075 : 11.230 5.334 3.009 0.488 MuHd_095 : 9.392 5.739 1.371 1.101 MuHd_100 : 16.431 6.850 4.125 1.890 MuHd_105 : 28.831 10.518 7.734 3.387 Hmax_075 : -9.333 -3.033 -5.854 -0.607 Hmax_095 : -15.137 -7.612 -7.615 -1.330 Hmax_100 : -3.300 -2.100 -4.113 0.480 Hmax_105 : -3.300 -1.517 -4.113 0.770 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9948 0.0052 DFMC : 0.9885 0.0115
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 791 PKNH_1347100 MENNKSGENAKAFMESKDKGKKDSDDNDDDDKKGKDDKDKQNVHHKSKGGTTHRKKDGKDNNTKRSGNDNDRVQTNSRGK 80 HSDKNGVTKGGGGAEDSKVNNDSAPPIDSNLPKNPNVTNKIERKSNSMSLSDTSARRSKDKGDRTQQKHKHKHGNAESAE 160 RRRRDAKSVKYVKDAENAKHEQGGDEVEDDKTDGETDEDEESADDSLTEEESDSDDDEEKRKNNDPSKAQYKKIEKHPTC 240 ELLNLDRSNTIQFYNLLNGKNKEKDYNSSSSRKERYRSSNLKKEKKLKMSHTYEEFLWDHHDYTSLKVNYKITKKSHYDK 320 TKKRPHLPIFISENKERTLNKSSICTDNAKFLNFLNDNEKNAYYYKNRKRYESRRRKQKKTNIKIKEKNQPKETLDNYII 400 NVKEKNRYHEMMSSENVDKVKVPLEHYPSGLKTDEAYLSELQDTEQKGQMKDQERQKNYASTVEEEKKIIKEKRKIKCSI 480 CCNRRFFIFQKKTLRKRKEKIIIFLNHNYSACENGQFNDHFYKTIHKNDLENLEEERIYIDNNKENTIKKIIYRIFPQFS 560 IFSLILYVTFIQWVIFILLISIKSDFTLTPSNDSLKNFGSNFPHNIFKKAEFYRLFTSLFLHSNFNHICANTYVQLTVGF 640 LLEYLYGTYVVFLVYVFTGIYGIILSSPLTYCYSTTESSSSSSGIIGIFFSEILMMTNFNVDKISISVHLFCFFLLLLFL 720 KFSLNTVSINIYSHFFGFLGGFLIGIILKRNQLKYFLKNNLLIQILSLVFLIVSLAAAIFISTYVVQNCPK 800 ................................................................................ 80 ................................................................................ 160 ...P..P......................................................................... 240 ..................................P............................................. 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ....................................................................... 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 3 Name Pos Context Score Pred ____________________________v_________________ PKNH_1347100 5 --MENNK|SG 0.074 . PKNH_1347100 11 KSGENAK|AF 0.073 . PKNH_1347100 17 KAFMESK|DK 0.082 . PKNH_1347100 19 FMESKDK|GK 0.063 . PKNH_1347100 21 ESKDKGK|KD 0.071 . PKNH_1347100 22 SKDKGKK|DS 0.142 . PKNH_1347100 32 DNDDDDK|KG 0.054 . PKNH_1347100 33 NDDDDKK|GK 0.107 . PKNH_1347100 35 DDDKKGK|DD 0.084 . PKNH_1347100 38 KKGKDDK|DK 0.077 . PKNH_1347100 40 GKDDKDK|QN 0.067 . PKNH_1347100 46 KQNVHHK|SK 0.133 . PKNH_1347100 48 NVHHKSK|GG 0.075 . PKNH_1347100 54 KGGTTHR|KK 0.093 . PKNH_1347100 55 GGTTHRK|KD 0.098 . PKNH_1347100 56 GTTHRKK|DG 0.108 . PKNH_1347100 59 HRKKDGK|DN 0.101 . PKNH_1347100 64 GKDNNTK|RS 0.064 . PKNH_1347100 65 KDNNTKR|SG 0.347 . PKNH_1347100 72 SGNDNDR|VQ 0.082 . PKNH_1347100 78 RVQTNSR|GK 0.088 . PKNH_1347100 80 QTNSRGK|HS 0.083 . PKNH_1347100 84 RGKHSDK|NG 0.070 . PKNH_1347100 89 DKNGVTK|GG 0.110 . PKNH_1347100 98 GGAEDSK|VN 0.061 . PKNH_1347100 113 IDSNLPK|NP 0.074 . PKNH_1347100 120 NPNVTNK|IE 0.092 . PKNH_1347100 123 VTNKIER|KS 0.077 . PKNH_1347100 124 TNKIERK|SN 0.182 . PKNH_1347100 136 LSDTSAR|RS 0.100 . PKNH_1347100 137 SDTSARR|SK 0.319 . PKNH_1347100 139 TSARRSK|DK 0.323 . PKNH_1347100 141 ARRSKDK|GD 0.103 . PKNH_1347100 144 SKDKGDR|TQ 0.082 . PKNH_1347100 148 GDRTQQK|HK 0.092 . PKNH_1347100 150 RTQQKHK|HK 0.075 . PKNH_1347100 152 QQKHKHK|HG 0.072 . PKNH_1347100 161 NAESAER|RR 0.073 . PKNH_1347100 162 AESAERR|RR 0.132 . PKNH_1347100 163 ESAERRR|RD 0.131 . PKNH_1347100 164 SAERRRR|DA 0.635 *ProP* PKNH_1347100 167 RRRRDAK|SV 0.582 *ProP* PKNH_1347100 170 RDAKSVK|YV 0.136 . PKNH_1347100 173 KSVKYVK|DA 0.090 . PKNH_1347100 179 KDAENAK|HE 0.071 . PKNH_1347100 191 DEVEDDK|TD 0.061 . PKNH_1347100 220 SDDDEEK|RK 0.055 . PKNH_1347100 221 DDDEEKR|KN 0.110 . PKNH_1347100 222 DDEEKRK|NN 0.093 . PKNH_1347100 228 KNNDPSK|AQ 0.075 . PKNH_1347100 232 PSKAQYK|KI 0.086 . PKNH_1347100 233 SKAQYKK|IE 0.093 . PKNH_1347100 236 QYKKIEK|HP 0.058 . PKNH_1347100 247 ELLNLDR|SN 0.104 . PKNH_1347100 260 YNLLNGK|NK 0.059 . PKNH_1347100 262 LLNGKNK|EK 0.070 . PKNH_1347100 264 NGKNKEK|DY 0.070 . PKNH_1347100 272 YNSSSSR|KE 0.078 . PKNH_1347100 273 NSSSSRK|ER 0.088 . PKNH_1347100 275 SSSRKER|YR 0.531 *ProP* PKNH_1347100 277 SRKERYR|SS 0.135 . PKNH_1347100 282 YRSSNLK|KE 0.068 . PKNH_1347100 283 RSSNLKK|EK 0.136 . PKNH_1347100 285 SNLKKEK|KL 0.068 . PKNH_1347100 286 NLKKEKK|LK 0.087 . PKNH_1347100 288 KKEKKLK|MS 0.088 . PKNH_1347100 307 HDYTSLK|VN 0.064 . PKNH_1347100 311 SLKVNYK|IT 0.067 . PKNH_1347100 314 VNYKITK|KS 0.062 . PKNH_1347100 315 NYKITKK|SH 0.115 . PKNH_1347100 320 KKSHYDK|TK 0.065 . PKNH_1347100 322 SHYDKTK|KR 0.064 . PKNH_1347100 323 HYDKTKK|RP 0.073 . PKNH_1347100 324 YDKTKKR|PH 0.206 . PKNH_1347100 335 IFISENK|ER 0.053 . PKNH_1347100 337 ISENKER|TL 0.104 . PKNH_1347100 341 KERTLNK|SS 0.082 . PKNH_1347100 350 ICTDNAK|FL 0.066 . PKNH_1347100 360 FLNDNEK|NA 0.063 . PKNH_1347100 366 KNAYYYK|NR 0.062 . PKNH_1347100 368 AYYYKNR|KR 0.084 . PKNH_1347100 369 YYYKNRK|RY 0.069 . PKNH_1347100 370 YYKNRKR|YE 0.209 . PKNH_1347100 374 RKRYESR|RR 0.097 . PKNH_1347100 375 KRYESRR|RK 0.179 . PKNH_1347100 376 RYESRRR|KQ 0.096 . PKNH_1347100 377 YESRRRK|QK 0.328 . PKNH_1347100 379 SRRRKQK|KT 0.240 . PKNH_1347100 380 RRRKQKK|TN 0.182 . PKNH_1347100 384 QKKTNIK|IK 0.072 . PKNH_1347100 386 KTNIKIK|EK 0.080 . PKNH_1347100 388 NIKIKEK|NQ 0.059 . PKNH_1347100 392 KEKNQPK|ET 0.063 . PKNH_1347100 403 NYIINVK|EK 0.058 . PKNH_1347100 405 IINVKEK|NR 0.076 . PKNH_1347100 407 NVKEKNR|YH 0.085 . PKNH_1347100 419 SSENVDK|VK 0.066 . PKNH_1347100 421 ENVDKVK|VP 0.062 . PKNH_1347100 432 HYPSGLK|TD 0.055 . PKNH_1347100 447 LQDTEQK|GQ 0.059 . PKNH_1347100 451 EQKGQMK|DQ 0.078 . PKNH_1347100 455 QMKDQER|QK 0.086 . PKNH_1347100 457 KDQERQK|NY 0.061 . PKNH_1347100 467 STVEEEK|KI 0.063 . PKNH_1347100 468 TVEEEKK|II 0.115 . PKNH_1347100 471 EEKKIIK|EK 0.062 . PKNH_1347100 473 KKIIKEK|RK 0.065 . PKNH_1347100 474 KIIKEKR|KI 0.254 . PKNH_1347100 475 IIKEKRK|IK 0.086 . PKNH_1347100 477 KEKRKIK|CS 0.149 . PKNH_1347100 484 CSICCNR|RF 0.082 . PKNH_1347100 485 SICCNRR|FF 0.152 . PKNH_1347100 491 RFFIFQK|KT 0.064 . PKNH_1347100 492 FFIFQKK|TL 0.084 . PKNH_1347100 495 FQKKTLR|KR 0.071 . PKNH_1347100 496 QKKTLRK|RK 0.094 . PKNH_1347100 497 KKTLRKR|KE 0.131 . PKNH_1347100 498 KTLRKRK|EK 0.246 . PKNH_1347100 500 LRKRKEK|II 0.173 . PKNH_1347100 523 FNDHFYK|TI 0.071 . PKNH_1347100 527 FYKTIHK|ND 0.055 . PKNH_1347100 537 ENLEEER|IY 0.074 . PKNH_1347100 544 IYIDNNK|EN 0.059 . PKNH_1347100 549 NKENTIK|KI 0.062 . PKNH_1347100 550 KENTIKK|II 0.170 . PKNH_1347100 554 IKKIIYR|IF 0.080 . PKNH_1347100 583 ILLISIK|SD 0.078 . PKNH_1347100 596 PSNDSLK|NF 0.077 . PKNH_1347100 608 FPHNIFK|KA 0.080 . PKNH_1347100 609 PHNIFKK|AE 0.129 . PKNH_1347100 614 KKAEFYR|LF 0.104 . PKNH_1347100 703 TNFNVDK|IS 0.064 . PKNH_1347100 721 LLLLFLK|FS 0.056 . PKNH_1347100 749 LIGIILK|RN 0.054 . PKNH_1347100 750 IGIILKR|NQ 0.122 . PKNH_1347100 754 LKRNQLK|YF 0.071 . PKNH_1347100 758 QLKYFLK|NN 0.060 . PKNH_1347100 791 VVQNCPK|-- 0.066 . ____________________________^_________________

  • Fasta :-

    >PKNH_1347100 ATGGAAAACAACAAATCTGGAGAAAATGCAAAAGCCTTTATGGAGTCAAAGGACAAGGGT AAAAAGGATAGCGATGATAATGACGACGATGATAAAAAGGGGAAAGACGATAAGGACAAG CAGAACGTCCATCATAAAAGTAAAGGTGGAACTACCCACAGGAAGAAAGATGGCAAAGAC AATAATACAAAACGTAGCGGTAACGACAACGATAGGGTTCAGACGAATAGCAGAGGCAAA CATAGTGATAAAAACGGCGTCACTAAAGGGGGTGGCGGTGCGGAAGATTCCAAGGTGAAT AATGATTCTGCCCCTCCGATAGATTCGAACCTCCCGAAAAATCCCAACGTTACGAATAAG ATAGAACGAAAAAGTAATAGCATGTCGCTGAGTGATACCAGCGCAAGGCGCTCGAAAGAC AAGGGAGACAGGACACAGCAAAAACACAAACATAAACATGGAAATGCGGAAAGTGCGGAG AGGAGAAGAAGAGATGCAAAAAGTGTAAAATATGTGAAGGACGCCGAAAATGCGAAGCAC GAACAGGGGGGGGATGAAGTAGAAGATGATAAAACGGATGGCGAGACGGACGAGGACGAG GAATCAGCGGACGACTCGCTGACCGAAGAAGAAAGCGATAGTGATGATGACGAAGAAAAA AGAAAAAATAATGACCCCAGTAAGGCCCAATATAAAAAAATTGAAAAGCATCCAACATGT GAACTACTCAATCTAGACAGAAGCAACACAATCCAATTTTACAATTTACTAAATGGTAAA AATAAAGAAAAAGATTATAACAGTAGCAGTTCAAGGAAGGAAAGATATCGAAGTAGCAAT TTGAAGAAAGAAAAAAAGTTAAAAATGAGTCATACATATGAAGAATTCCTATGGGATCAT CATGATTATACTTCTTTAAAAGTAAATTATAAAATTACCAAAAAAAGTCATTACGATAAA ACGAAAAAAAGACCACACCTTCCCATATTTATAAGTGAAAATAAAGAACGTACTTTAAAT AAGAGTAGTATCTGTACAGATAATGCGAAGTTTTTAAATTTCCTAAATGATAATGAAAAA AATGCTTATTATTATAAGAATCGAAAACGATACGAGAGTAGACGAAGAAAGCAAAAAAAA ACCAATATAAAAATAAAAGAAAAAAATCAACCGAAAGAAACGTTAGACAATTATATAATA AATGTGAAGGAGAAAAATAGATATCATGAAATGATGTCCAGCGAAAATGTAGATAAAGTC AAAGTGCCGCTGGAGCATTATCCTTCTGGCCTAAAAACCGATGAAGCGTACTTAAGCGAA TTACAAGATACTGAACAGAAGGGACAAATGAAAGACCAAGAACGCCAAAAGAATTACGCA AGTACCGTTGAAGAGGAAAAAAAAATTATAAAAGAAAAAAGAAAAATTAAATGTTCCATA TGTTGTAATCGAAGATTTTTTATATTCCAAAAAAAAACGTTAAGAAAAAGAAAGGAAAAA ATTATAATTTTTTTAAATCATAATTATTCTGCATGTGAGAATGGACAATTTAATGACCAT TTTTACAAAACCATTCATAAAAATGATTTGGAAAATTTAGAAGAAGAACGAATTTACATT GACAATAATAAGGAAAATACAATCAAGAAAATTATTTATAGAATATTTCCACAGTTTTCT ATTTTCAGCTTAATCCTCTACGTTACTTTTATTCAATGGGTAATATTTATTCTGCTTATA TCCATCAAATCTGATTTTACCTTAACCCCATCAAATGATTCGTTAAAAAATTTTGGAAGC AATTTCCCACACAATATTTTCAAGAAGGCCGAATTTTATCGCCTTTTCACATCGTTATTT TTACATTCCAATTTTAACCACATTTGTGCAAATACATATGTTCAGTTAACCGTCGGATTC TTGTTAGAATATCTGTATGGTACATATGTTGTTTTTTTAGTATACGTGTTTACGGGCATT TATGGAATAATTTTATCCTCCCCATTAACGTACTGCTACTCGACCACCGAAAGCAGTAGC AGCTCCTCAGGAATTATTGGAATTTTTTTTTCAGAAATTTTAATGATGACAAATTTTAAT GTGGATAAAATTAGCATTAGTGTGCATTTATTTTGTTTTTTTCTCCTCCTCTTATTTCTT AAATTTTCTTTAAACACCGTCAGTATTAATATATACAGCCACTTTTTTGGTTTCCTTGGA GGCTTTCTAATCGGCATAATTTTAAAACGTAACCAACTCAAGTACTTTCTGAAAAATAAT TTGCTAATTCAAATATTGTCCCTGGTCTTCCTGATAGTAAGTTTAGCGGCTGCTATTTTT ATATCAACATATGTCGTGCAGAATTGTCCAAAATAA
  • Download Fasta

  • Fasta :-

    MENNKSGENAKAFMESKDKGKKDSDDNDDDDKKGKDDKDKQNVHHKSKGGTTHRKKDGKD NNTKRSGNDNDRVQTNSRGKHSDKNGVTKGGGGAEDSKVNNDSAPPIDSNLPKNPNVTNK IERKSNSMSLSDTSARRSKDKGDRTQQKHKHKHGNAESAERRRRDAKSVKYVKDAENAKH EQGGDEVEDDKTDGETDEDEESADDSLTEEESDSDDDEEKRKNNDPSKAQYKKIEKHPTC ELLNLDRSNTIQFYNLLNGKNKEKDYNSSSSRKERYRSSNLKKEKKLKMSHTYEEFLWDH HDYTSLKVNYKITKKSHYDKTKKRPHLPIFISENKERTLNKSSICTDNAKFLNFLNDNEK NAYYYKNRKRYESRRRKQKKTNIKIKEKNQPKETLDNYIINVKEKNRYHEMMSSENVDKV KVPLEHYPSGLKTDEAYLSELQDTEQKGQMKDQERQKNYASTVEEEKKIIKEKRKIKCSI CCNRRFFIFQKKTLRKRKEKIIIFLNHNYSACENGQFNDHFYKTIHKNDLENLEEERIYI DNNKENTIKKIIYRIFPQFSIFSLILYVTFIQWVIFILLISIKSDFTLTPSNDSLKNFGS NFPHNIFKKAEFYRLFTSLFLHSNFNHICANTYVQLTVGFLLEYLYGTYVVFLVYVFTGI YGIILSSPLTYCYSTTESSSSSSGIIGIFFSEILMMTNFNVDKISISVHLFCFFLLLLFL KFSLNTVSINIYSHFFGFLGGFLIGIILKRNQLKYFLKNNLLIQILSLVFLIVSLAAAIF ISTYVVQNCPK

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PKNH_134710082 SRGKHSDKNG0.997unspPKNH_134710082 SRGKHSDKNG0.997unspPKNH_134710082 SRGKHSDKNG0.997unspPKNH_1347100125 SIERKSNSMS0.993unspPKNH_1347100129 SSNSMSLSDT0.996unspPKNH_1347100134 SLSDTSARRS0.995unspPKNH_1347100138 SSARRSKDKG0.997unspPKNH_1347100168 SRDAKSVKYV0.993unspPKNH_1347100202 SEDEESADDS0.993unspPKNH_1347100206 SSADDSLTEE0.994unspPKNH_1347100212 STEEESDSDD0.995unspPKNH_1347100214 SEESDSDDDE0.997unspPKNH_1347100271 SNSSSSRKER0.997unspPKNH_1347100316 SITKKSHYDK0.995unspPKNH_1347100373 SKRYESRRRK0.997unspPKNH_1347100594 SPSNDSLKNF0.991unspPKNH_13471006 SENNKSGENA0.992unspPKNH_134710066 SNTKRSGNDN0.993unsp

PK14_0450c      PKH_133640      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India