PKNH_1419900 | ubiquitin carboxyl-terminal hydrolase MINDY, putative

_IDPredictionOTHERSPmTPCS_Position
PKNH_1419900OTHER0.9999550.0000310.000014
No Results

  • Fasta :-

    >PKNH_1419900 MTTMIKLHYDEKNDEEENMIIRSADYETFKSYVLKKYDKVYEIVNYENENINYYSVKWIN FINRRVPILLQNKSGPCPLLCITNILLLRNQLQIDRKIKKISQSFLENKIMNILLESNKK NVTDNTASCNYRKNIIECVDILPQLKYGLDVNCKFTNIHSFEYTKGLCIFDMLNIPLYHG WVISSEDVMFYSYLKDYSYNVIINKIVRYNEYYERKKKKNADDTSNGRTTALYQLEGVEE EKRDDCHFEESYKRDMLMDGPTNTSRGASNCHQKKAAPNDAIGNINKGINKITEKNEKEK GINSVPIFPDDLDKISKENSKKTLFQDSSSVHLITDPPLDADTTKKKSTFFGKKITSRDG SSSKSRTQTNVINVKQSCSIDLEKGANKYSGETGHKSDGFVVKESKTPSNLATSVKKNNA NRNATIGANVNISTIASVVSAISSDNSSGDVNAVPTPKFPEDPLLNNSTSIISVEYSSEG NTQGKSKKSSSDERNIRNNELFMQSNGIASLTSETANADIADNYTENSENFIMKNYNTDI NLTPYEIHEAVIISQFLETYKTQLTLVGLKLLQENLNPNQLVAFFRNNHFNTLFKYENKL FLLAADISFLHLSCTWELFDNVDNDTSYYDNNFRCISNQKISEKNLDHSIIYLNYYDGSS AKNNMHCVRSNAPFSNDKKKKKKKCTFM
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_1419900.fa Sequence name : PKNH_1419900 Sequence length : 688 VALUES OF COMPUTED PARAMETERS Coef20 : 2.929 CoefTot : -0.387 ChDiff : 4 ZoneTo : 9 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.282 1.500 0.152 0.607 MesoH : -0.629 0.275 -0.408 0.241 MuHd_075 : 14.069 6.315 3.966 2.269 MuHd_095 : 17.249 8.977 2.816 2.919 MuHd_100 : 15.684 8.402 2.271 2.792 MuHd_105 : 10.389 6.523 0.869 2.448 Hmax_075 : -15.167 -6.300 -6.484 -0.187 Hmax_095 : -10.800 -3.600 -6.770 0.300 Hmax_100 : -13.000 -5.800 -6.788 -0.280 Hmax_105 : -13.000 -6.100 -6.989 -0.390 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9869 0.0131 DFMC : 0.9833 0.0167
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 688 PKNH_1419900 MTTMIKLHYDEKNDEEENMIIRSADYETFKSYVLKKYDKVYEIVNYENENINYYSVKWINFINRRVPILLQNKSGPCPLL 80 CITNILLLRNQLQIDRKIKKISQSFLENKIMNILLESNKKNVTDNTASCNYRKNIIECVDILPQLKYGLDVNCKFTNIHS 160 FEYTKGLCIFDMLNIPLYHGWVISSEDVMFYSYLKDYSYNVIINKIVRYNEYYERKKKKNADDTSNGRTTALYQLEGVEE 240 EKRDDCHFEESYKRDMLMDGPTNTSRGASNCHQKKAAPNDAIGNINKGINKITEKNEKEKGINSVPIFPDDLDKISKENS 320 KKTLFQDSSSVHLITDPPLDADTTKKKSTFFGKKITSRDGSSSKSRTQTNVINVKQSCSIDLEKGANKYSGETGHKSDGF 400 VVKESKTPSNLATSVKKNNANRNATIGANVNISTIASVVSAISSDNSSGDVNAVPTPKFPEDPLLNNSTSIISVEYSSEG 480 NTQGKSKKSSSDERNIRNNELFMQSNGIASLTSETANADIADNYTENSENFIMKNYNTDINLTPYEIHEAVIISQFLETY 560 KTQLTLVGLKLLQENLNPNQLVAFFRNNHFNTLFKYENKLFLLAADISFLHLSCTWELFDNVDNDTSYYDNNFRCISNQK 640 ISEKNLDHSIIYLNYYDGSSAKNNMHCVRSNAPFSNDKKKKKKKCTFM 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................ 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_1419900 6 -MTTMIK|LH 0.056 . PKNH_1419900 12 KLHYDEK|ND 0.066 . PKNH_1419900 22 EENMIIR|SA 0.166 . PKNH_1419900 30 ADYETFK|SY 0.069 . PKNH_1419900 35 FKSYVLK|KY 0.096 . PKNH_1419900 36 KSYVLKK|YD 0.135 . PKNH_1419900 39 VLKKYDK|VY 0.061 . PKNH_1419900 57 INYYSVK|WI 0.081 . PKNH_1419900 64 WINFINR|RV 0.119 . PKNH_1419900 65 INFINRR|VP 0.089 . PKNH_1419900 73 PILLQNK|SG 0.058 . PKNH_1419900 89 TNILLLR|NQ 0.077 . PKNH_1419900 96 NQLQIDR|KI 0.073 . PKNH_1419900 97 QLQIDRK|IK 0.080 . PKNH_1419900 99 QIDRKIK|KI 0.189 . PKNH_1419900 100 IDRKIKK|IS 0.101 . PKNH_1419900 109 QSFLENK|IM 0.064 . PKNH_1419900 119 ILLESNK|KN 0.057 . PKNH_1419900 120 LLESNKK|NV 0.123 . PKNH_1419900 132 TASCNYR|KN 0.109 . PKNH_1419900 133 ASCNYRK|NI 0.094 . PKNH_1419900 146 DILPQLK|YG 0.057 . PKNH_1419900 154 GLDVNCK|FT 0.066 . PKNH_1419900 165 HSFEYTK|GL 0.064 . PKNH_1419900 195 MFYSYLK|DY 0.062 . PKNH_1419900 205 YNVIINK|IV 0.073 . PKNH_1419900 208 IINKIVR|YN 0.125 . PKNH_1419900 215 YNEYYER|KK 0.074 . PKNH_1419900 216 NEYYERK|KK 0.084 . PKNH_1419900 217 EYYERKK|KK 0.079 . PKNH_1419900 218 YYERKKK|KN 0.210 . PKNH_1419900 219 YERKKKK|NA 0.202 . PKNH_1419900 228 DDTSNGR|TT 0.067 . PKNH_1419900 242 EGVEEEK|RD 0.057 . PKNH_1419900 243 GVEEEKR|DD 0.202 . PKNH_1419900 253 HFEESYK|RD 0.054 . PKNH_1419900 254 FEESYKR|DM 0.151 . PKNH_1419900 266 GPTNTSR|GA 0.113 . PKNH_1419900 274 ASNCHQK|KA 0.080 . PKNH_1419900 275 SNCHQKK|AA 0.112 . PKNH_1419900 287 AIGNINK|GI 0.071 . PKNH_1419900 291 INKGINK|IT 0.074 . PKNH_1419900 295 INKITEK|NE 0.060 . PKNH_1419900 298 ITEKNEK|EK 0.062 . PKNH_1419900 300 EKNEKEK|GI 0.083 . PKNH_1419900 314 FPDDLDK|IS 0.056 . PKNH_1419900 317 DLDKISK|EN 0.063 . PKNH_1419900 321 ISKENSK|KT 0.060 . PKNH_1419900 322 SKENSKK|TL 0.107 . PKNH_1419900 345 LDADTTK|KK 0.071 . PKNH_1419900 346 DADTTKK|KS 0.080 . PKNH_1419900 347 ADTTKKK|ST 0.167 . PKNH_1419900 353 KSTFFGK|KI 0.068 . PKNH_1419900 354 STFFGKK|IT 0.113 . PKNH_1419900 358 GKKITSR|DG 0.110 . PKNH_1419900 364 RDGSSSK|SR 0.077 . PKNH_1419900 366 GSSSKSR|TQ 0.139 . PKNH_1419900 375 TNVINVK|QS 0.064 . PKNH_1419900 384 CSIDLEK|GA 0.069 . PKNH_1419900 388 LEKGANK|YS 0.075 . PKNH_1419900 396 SGETGHK|SD 0.081 . PKNH_1419900 403 SDGFVVK|ES 0.065 . PKNH_1419900 406 FVVKESK|TP 0.057 . PKNH_1419900 416 NLATSVK|KN 0.073 . PKNH_1419900 417 LATSVKK|NN 0.086 . PKNH_1419900 422 KKNNANR|NA 0.133 . PKNH_1419900 458 NAVPTPK|FP 0.067 . PKNH_1419900 485 EGNTQGK|SK 0.079 . PKNH_1419900 487 NTQGKSK|KS 0.076 . PKNH_1419900 488 TQGKSKK|SS 0.341 . PKNH_1419900 494 KSSSDER|NI 0.124 . PKNH_1419900 497 SDERNIR|NN 0.195 . PKNH_1419900 534 SENFIMK|NY 0.077 . PKNH_1419900 561 QFLETYK|TQ 0.054 . PKNH_1419900 570 LTLVGLK|LL 0.054 . PKNH_1419900 586 QLVAFFR|NN 0.089 . PKNH_1419900 595 HFNTLFK|YE 0.064 . PKNH_1419900 599 LFKYENK|LF 0.056 . PKNH_1419900 634 YYDNNFR|CI 0.092 . PKNH_1419900 640 RCISNQK|IS 0.071 . PKNH_1419900 644 NQKISEK|NL 0.073 . PKNH_1419900 662 YDGSSAK|NN 0.069 . PKNH_1419900 669 NNMHCVR|SN 0.127 . PKNH_1419900 678 APFSNDK|KK 0.061 . PKNH_1419900 679 PFSNDKK|KK 0.098 . PKNH_1419900 680 FSNDKKK|KK 0.169 . PKNH_1419900 681 SNDKKKK|KK 0.133 . PKNH_1419900 682 NDKKKKK|KK 0.122 . PKNH_1419900 683 DKKKKKK|KC 0.112 . PKNH_1419900 684 KKKKKKK|CT 0.171 . ____________________________^_________________

  • Fasta :-

    >PKNH_1419900 ATGACAACTATGATCAAGCTGCATTATGATGAGAAAAATGACGAAGAAGAAAATATGATC ATTCGGAGCGCCGACTACGAAACTTTCAAATCCTATGTGCTAAAAAAATACGATAAAGTA TACGAAATTGTTAATTACGAAAATGAGAACATAAATTATTATAGCGTCAAATGGATTAAC TTTATAAACAGGAGGGTACCAATTTTGCTCCAAAATAAAAGCGGACCATGTCCTCTTCTT TGCATTACGAACATTCTGCTTCTACGTAACCAGCTACAGATTGACAGGAAAATTAAGAAA ATATCGCAGAGTTTCCTCGAAAATAAAATTATGAACATACTGTTAGAGTCCAATAAGAAA AATGTGACTGATAATACCGCGTCGTGTAATTATAGGAAAAATATTATAGAGTGTGTAGAT ATATTACCTCAGTTAAAATACGGACTAGACGTTAATTGTAAATTTACTAATATTCATTCA TTTGAGTACACCAAAGGGTTGTGCATATTTGACATGCTCAATATCCCATTATATCATGGT TGGGTCATCTCATCGGAAGATGTAATGTTTTACTCCTACCTGAAAGATTATTCCTACAAT GTCATAATAAATAAAATTGTGAGATATAATGAATACTACGAGAGAAAGAAAAAAAAAAAT GCAGACGATACTTCCAATGGGAGAACTACCGCTTTGTATCAGTTGGAGGGTGTGGAGGAG GAAAAAAGGGACGATTGCCATTTTGAAGAATCCTACAAGAGGGATATGCTCATGGATGGC CCGACAAATACTTCAAGAGGAGCCTCCAACTGCCATCAGAAGAAAGCTGCACCCAACGAT GCCATTGGCAACATAAACAAAGGAATCAACAAAATCACAGAAAAAAATGAGAAGGAAAAA GGCATAAATAGTGTACCCATTTTTCCAGATGATCTTGATAAAATATCAAAAGAAAATTCC AAGAAGACATTATTTCAAGACAGCTCCTCTGTGCACCTTATTACTGACCCCCCCTTGGAT GCAGACACAACAAAAAAAAAGAGCACATTTTTTGGTAAGAAAATCACAAGTCGAGATGGG TCTAGCAGTAAGAGCAGAACTCAAACTAACGTAATAAACGTAAAGCAGTCATGCTCCATA GATTTGGAAAAAGGTGCAAATAAGTACAGCGGTGAAACAGGGCACAAGTCGGACGGATTC GTTGTGAAGGAAAGTAAAACGCCAAGTAATTTGGCCACCTCTGTAAAAAAAAACAACGCA AATAGGAACGCCACTATTGGCGCCAATGTAAATATCAGTACCATTGCCAGTGTTGTTAGC GCCATCAGCAGTGATAACAGCAGCGGCGATGTGAATGCGGTACCCACGCCCAAATTTCCG GAGGATCCCTTGCTGAACAATTCTACCAGTATAATTTCAGTTGAATATTCTTCTGAGGGG AATACCCAGGGTAAGTCCAAAAAATCCTCCTCGGACGAAAGGAATATTAGAAATAATGAA TTGTTTATGCAATCAAACGGAATAGCTAGCTTAACTAGCGAAACTGCGAATGCAGACATA GCAGATAATTACACAGAAAATAGTGAAAATTTTATTATGAAAAATTACAATACAGATATA AATTTAACTCCATACGAAATTCACGAAGCGGTAATTATTTCCCAATTTCTGGAAACATAC AAAACTCAATTGACATTAGTTGGGTTGAAATTATTGCAAGAAAATTTGAATCCAAATCAA CTTGTAGCTTTTTTCAGGAATAACCATTTTAACACCCTTTTTAAGTATGAGAATAAATTG TTCTTGTTGGCTGCAGACATTTCCTTTCTACATTTGAGTTGTACATGGGAATTATTTGAC AACGTAGACAATGACACCTCCTACTATGATAACAATTTTAGGTGCATATCAAATCAGAAA ATTTCGGAAAAAAATTTAGACCATTCCATAATTTATTTGAACTATTATGATGGCAGTAGT GCCAAAAATAACATGCATTGTGTGAGGTCCAATGCGCCCTTTTCAAATGATAAAAAGAAG AAGAAAAAAAAGTGTACCTTTATGTAG
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  • Fasta :-

    MTTMIKLHYDEKNDEEENMIIRSADYETFKSYVLKKYDKVYEIVNYENENINYYSVKWIN FINRRVPILLQNKSGPCPLLCITNILLLRNQLQIDRKIKKISQSFLENKIMNILLESNKK NVTDNTASCNYRKNIIECVDILPQLKYGLDVNCKFTNIHSFEYTKGLCIFDMLNIPLYHG WVISSEDVMFYSYLKDYSYNVIINKIVRYNEYYERKKKKNADDTSNGRTTALYQLEGVEE EKRDDCHFEESYKRDMLMDGPTNTSRGASNCHQKKAAPNDAIGNINKGINKITEKNEKEK GINSVPIFPDDLDKISKENSKKTLFQDSSSVHLITDPPLDADTTKKKSTFFGKKITSRDG SSSKSRTQTNVINVKQSCSIDLEKGANKYSGETGHKSDGFVVKESKTPSNLATSVKKNNA NRNATIGANVNISTIASVVSAISSDNSSGDVNAVPTPKFPEDPLLNNSTSIISVEYSSEG NTQGKSKKSSSDERNIRNNELFMQSNGIASLTSETANADIADNYTENSENFIMKNYNTDI NLTPYEIHEAVIISQFLETYKTQLTLVGLKLLQENLNPNQLVAFFRNNHFNTLFKYENKL FLLAADISFLHLSCTWELFDNVDNDTSYYDNNFRCISNQKISEKNLDHSIIYLNYYDGSS AKNNMHCVRSNAPFSNDKKKKKKKCTFM

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IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PKNH_1419900361 SSRDGSSSKS0.996unspPKNH_1419900361 SSRDGSSSKS0.996unspPKNH_1419900361 SSRDGSSSKS0.996unspPKNH_1419900363 SDGSSSKSRT0.993unspPKNH_1419900489 SKSKKSSSDE0.998unspPKNH_1419900491 SKKSSSDERN0.997unspPKNH_1419900642 SNQKISEKNL0.995unspPKNH_1419900316 SLDKISKENS0.992unspPKNH_1419900348 STKKKSTFFG0.991unsp

PK13_1870w      PKH_141830      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India