PKNH_1446200 | ataxin-3, putative

UniProt_ID: B3LCQ8

Computed_GO_Component_IDs:
Computed_GO_Components:
Computed_GO_Function_IDs: GO:0005515 GO:0004843
Computed_GO_Functions: protein binding thiol-dependent ubiquitin-specific protease activity
Computed_GO_Process_IDs: GO:0016579
Computed_GO_Processes: protein deubiquitination
Curated_GO_Component_IDs:
Curated_GO_Components:
Curated_GO_Function_IDs:
Curated_GO_Functions:
Curated_GO_Processes:

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	PKNH_1446200	OTHER	0.999818	0.000021	0.000161

No Results

Fasta :-
>PKNH_1446200 MNKKYVYWEKQGNDRMCGLHCINAILQGPHYSEDVVATIGREIDEKEREFLKSSGGAGEN DMNELMRRNSSNVLDDGFINISVLIECLRRKNISVKNTFEDDLKKILSSDHQDIGYICNL QQHWFCIRKIYNTWYVLDSLKSGPLYIKDINLKYYFNDIINKYHVFSVQNMNPYVSLPKA DINFVTRNRNQFYLCTSEISEISGVSSNGFIMEERVSSGSPVDKSSFFSSTGKDKPNKFK WPEGGGRKLNDQEGSDLVGVGGGAFPSSVNDPDDELQMALRLSMEEYVKNLPPPPPEAST AENCINIMIKLSNGKIHRRFCNTETLADIFYWLEYEWVNGLELGPSLLLRSSYNLYQIYP RRKFCKYQNGTIELQTGDKVEQVQDTPLLDLKFEKEESFILS
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_1446200.fa Sequence name : PKNH_1446200 Sequence length : 402 VALUES OF COMPUTED PARAMETERS Coef20 : 3.057 CoefTot : -0.674 ChDiff : -8 ZoneTo : 8 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.500 1.171 -0.048 0.435 MesoH : -0.987 -0.097 -0.515 0.132 MuHd_075 : 30.318 13.878 7.696 4.539 MuHd_095 : 26.392 11.547 5.907 4.959 MuHd_100 : 21.699 9.597 4.402 4.046 MuHd_105 : 12.607 6.363 2.206 2.522 Hmax_075 : 2.450 1.575 -1.075 1.558 Hmax_095 : -1.750 -1.137 -3.021 1.400 Hmax_100 : -4.000 -3.200 -4.141 1.310 Hmax_105 : -7.817 -3.033 -4.432 1.120 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9741 0.0259 DFMC : 0.9679 0.0321

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 402 PKNH_1446200 MNKKYVYWEKQGNDRMCGLHCINAILQGPHYSEDVVATIGREIDEKEREFLKSSGGAGENDMNELMRRNSSNVLDDGFIN 80 ISVLIECLRRKNISVKNTFEDDLKKILSSDHQDIGYICNLQQHWFCIRKIYNTWYVLDSLKSGPLYIKDINLKYYFNDII 160 NKYHVFSVQNMNPYVSLPKADINFVTRNRNQFYLCTSEISEISGVSSNGFIMEERVSSGSPVDKSSFFSSTGKDKPNKFK 240 WPEGGGRKLNDQEGSDLVGVGGGAFPSSVNDPDDELQMALRLSMEEYVKNLPPPPPEASTAENCINIMIKLSNGKIHRRF 320 CNTETLADIFYWLEYEWVNGLELGPSLLLRSSYNLYQIYPRRKFCKYQNGTIELQTGDKVEQVQDTPLLDLKFEKEESFI 400 LS 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_1446200 3 ----MNK|KY 0.062 . PKNH_1446200 4 ---MNKK|YV 0.148 . PKNH_1446200 10 KYVYWEK|QG 0.066 . PKNH_1446200 15 EKQGNDR|MC 0.087 . PKNH_1446200 41 VVATIGR|EI 0.132 . PKNH_1446200 46 GREIDEK|ER 0.061 . PKNH_1446200 48 EIDEKER|EF 0.071 . PKNH_1446200 52 KEREFLK|SS 0.101 . PKNH_1446200 67 DMNELMR|RN 0.090 . PKNH_1446200 68 MNELMRR|NS 0.184 . PKNH_1446200 89 VLIECLR|RK 0.072 . PKNH_1446200 90 LIECLRR|KN 0.109 . PKNH_1446200 91 IECLRRK|NI 0.093 . PKNH_1446200 96 RKNISVK|NT 0.071 . PKNH_1446200 104 TFEDDLK|KI 0.060 . PKNH_1446200 105 FEDDLKK|IL 0.086 . PKNH_1446200 128 QHWFCIR|KI 0.077 . PKNH_1446200 129 HWFCIRK|IY 0.074 . PKNH_1446200 141 YVLDSLK|SG 0.061 . PKNH_1446200 148 SGPLYIK|DI 0.061 . PKNH_1446200 153 IKDINLK|YY 0.062 . PKNH_1446200 162 FNDIINK|YH 0.056 . PKNH_1446200 179 PYVSLPK|AD 0.056 . PKNH_1446200 187 DINFVTR|NR 0.083 . PKNH_1446200 189 NFVTRNR|NQ 0.069 . PKNH_1446200 215 GFIMEER|VS 0.088 . PKNH_1446200 224 SGSPVDK|SS 0.097 . PKNH_1446200 233 FFSSTGK|DK 0.076 . PKNH_1446200 235 SSTGKDK|PN 0.065 . PKNH_1446200 238 GKDKPNK|FK 0.080 . PKNH_1446200 240 DKPNKFK|WP 0.081 . PKNH_1446200 247 WPEGGGR|KL 0.117 . PKNH_1446200 248 PEGGGRK|LN 0.082 . PKNH_1446200 281 ELQMALR|LS 0.074 . PKNH_1446200 289 SMEEYVK|NL 0.057 . PKNH_1446200 310 CINIMIK|LS 0.069 . PKNH_1446200 315 IKLSNGK|IH 0.057 . PKNH_1446200 318 SNGKIHR|RF 0.104 . PKNH_1446200 319 NGKIHRR|FC 0.156 . PKNH_1446200 350 GPSLLLR|SS 0.143 . PKNH_1446200 361 LYQIYPR|RK 0.076 . PKNH_1446200 362 YQIYPRR|KF 0.158 . PKNH_1446200 363 QIYPRRK|FC 0.096 . PKNH_1446200 366 PRRKFCK|YQ 0.089 . PKNH_1446200 379 ELQTGDK|VE 0.054 . PKNH_1446200 392 TPLLDLK|FE 0.057 . PKNH_1446200 395 LDLKFEK|EE 0.068 . ____________________________^_________________

Fasta :-
>PKNH_1446200 ATGAACAAGAAGTATGTGTATTGGGAGAAACAGGGCAACGACCGTATGTGCGGTCTTCAT TGCATAAACGCCATCCTGCAGGGTCCTCACTACAGCGAAGACGTCGTGGCCACCATCGGT AGAGAAATCGACGAGAAGGAACGGGAGTTCCTGAAGAGCAGCGGAGGAGCTGGGGAAAAT GATATGAATGAACTGATGAGAAGGAATTCATCCAACGTCTTGGACGACGGATTTATAAAT ATCTCAGTTCTCATTGAATGTTTAAGGAGAAAAAATATTTCTGTAAAAAATACATTTGAA GATGACTTAAAAAAAATTTTATCAAGTGACCACCAAGACATAGGGTACATTTGTAATTTG CAGCAACACTGGTTCTGTATAAGAAAAATATACAACACATGGTATGTTTTGGATAGCTTG AAAAGTGGTCCCCTCTACATAAAGGATATCAATTTAAAATATTATTTCAATGATATTATT AATAAGTACCATGTGTTTTCTGTTCAGAACATGAATCCTTATGTGTCTTTACCGAAAGCG GATATTAATTTTGTAACTAGGAATCGTAATCAATTTTATTTATGCACAAGTGAGATTTCT GAAATATCTGGAGTATCCTCCAATGGGTTTATAATGGAAGAAAGGGTTAGTTCCGGTAGC CCTGTGGACAAGAGCTCTTTTTTTTCGTCCACTGGAAAGGATAAACCTAATAAGTTTAAG TGGCCCGAGGGTGGGGGGCGGAAGTTGAATGACCAAGAGGGGAGCGATCTCGTGGGTGTT GGTGGAGGCGCCTTTCCCTCCTCTGTGAATGATCCGGACGATGAGCTACAGATGGCTCTT CGGCTCTCCATGGAGGAGTACGTTAAGAATTTACCACCACCACCACCAGAAGCATCCACT GCGGAAAATTGCATTAACATTATGATTAAACTTTCGAATGGGAAAATCCACAGGCGGTTC TGCAACACGGAGACCTTGGCGGACATCTTCTATTGGCTCGAGTACGAATGGGTCAACGGT CTGGAGCTAGGTCCTTCTCTGCTACTCAGAAGTAGCTACAACCTTTACCAAATATATCCG CGGAGGAAGTTTTGCAAGTACCAAAATGGGACGATAGAGCTGCAGACGGGGGATAAGGTG GAACAAGTGCAGGACACACCCCTACTGGACTTGAAGTTCGAGAAGGAAGAGTCGTTCATA TTGTCTTAA
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Fasta :-

MNKKYVYWEKQGNDRMCGLHCINAILQGPHYSEDVVATIGREIDEKEREFLKSSGGAGEN DMNELMRRNSSNVLDDGFINISVLIECLRRKNISVKNTFEDDLKKILSSDHQDIGYICNL QQHWFCIRKIYNTWYVLDSLKSGPLYIKDINLKYYFNDIINKYHVFSVQNMNPYVSLPKA DINFVTRNRNQFYLCTSEISEISGVSSNGFIMEERVSSGSPVDKSSFFSSTGKDKPNKFK WPEGGGRKLNDQEGSDLVGVGGGAFPSSVNDPDDELQMALRLSMEEYVKNLPPPPPEAST AENCINIMIKLSNGKIHRRFCNTETLADIFYWLEYEWVNGLELGPSLLLRSSYNLYQIYP RRKFCKYQNGTIELQTGDKVEQVQDTPLLDLKFEKEESFILS

No Results

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	PKNH_1446200	220 S	VSSGSPVDK	0.997	unsp	PKNH_1446200	220 S	VSSGSPVDK	0.997	unsp	PKNH_1446200	220 S	VSSGSPVDK	0.997	unsp	PKNH_1446200	268 S	AFPSSVNDP	0.993	unsp	PKNH_1446200	283 S	ALRLSMEEY	0.997	unsp	PKNH_1446200	287 Y	SMEEYVKNL	0.99	unsp	PKNH_1446200	94 S	RKNISVKNT	0.997	unsp	PKNH_1446200	217 S	EERVSSGSP	0.995	unsp

PKNH_1446200 | ataxin-3, putative

ID's

UniProt_ID: B3LCQ8

GEO Functions

Computed_GO_Component_IDs:

Computed_GO_Components:

Computed_GO_Function_IDs: GO:0005515 GO:0004843

Computed_GO_Functions: protein binding thiol-dependent ubiquitin-specific protease activity

Computed_GO_Process_IDs: GO:0016579

Computed_GO_Processes: protein deubiquitination

Curated_GO_Component_IDs:

Curated_GO_Components:

Curated_GO_Function_IDs:

Curated_GO_Functions:

Curated_GO_Processes:

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

PK12_2510w PKH_144360

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India