PKNH_1453800 | microgamete surface protein MiGS, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:  GO:0009986      GO:0044310      

  • Curated_GO_Components:  cell surface      osmiophilic body      

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
PKNH_1453800SP0.0049300.9947630.000307CS pos: 26-27. CSA-DH. Pr: 0.2757
No Results

  • Fasta :-

    >PKNH_1453800 MALIIPLLFTLATLLLHTQNVTVCSADHFGEAIRRKAFKVQRSVRGDPGVNSAITSKRVN GASTTSKGNSLLEAKKREQDYFTLKINEQNFRWSLPLLMGSKKTPLELGIVTSTPITALY CSYNAKPNEEMNNIKYEVNASEGVKYISCKSRYCTAIGQGNTCAPIEHFFKMIHDFGLRK KNCTNRFCTYINDINFLNVNTKLDKRNMSVCSFSSNLGSEQVEGFYFRDSFYLYDTVKFD YKHFGCVTQSGVLTFNNVISGFIGLAYNRADAIANKKESSSILHTLVQKSVSKKNIFGLC FVEGGGFATFGGINNEALRKVLPVSKLQMGFQHLGGEDPQATSHEIVWLAYSDTSKSTYS LLLKEVNMVSTSNRVENAIGRVAVIDSYNYFLSFPAEITAKLKTAIYNSCVGNDNKCSNI INKGVFTLKNGGVDDFPTVELVFDDGKVLIHPKDYLIHEGDGVYRVLINSEETLKLGIPF FLNKYLTFDNENGKIGVGPSDCTFEMKGVSPGVDLSATEADSNDDPEDKDFTIEDFFQEN KLMILALTSLSVVGAIVGGVFFFG
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/PKNH_1453800.fa Sequence name : PKNH_1453800 Sequence length : 564 VALUES OF COMPUTED PARAMETERS Coef20 : 4.446 CoefTot : 0.608 ChDiff : 0 ZoneTo : 26 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.188 2.306 0.435 0.779 MesoH : -0.339 0.340 -0.330 0.229 MuHd_075 : 7.094 6.680 2.481 1.879 MuHd_095 : 9.058 17.860 4.825 3.747 MuHd_100 : 11.613 18.105 5.293 3.994 MuHd_105 : 15.399 22.293 6.302 5.166 Hmax_075 : 15.500 14.300 4.121 4.840 Hmax_095 : 20.500 25.300 4.353 7.520 Hmax_100 : 18.300 22.800 4.003 7.360 Hmax_105 : 17.400 21.500 3.995 6.670 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9628 0.0372 DFMC : 0.9618 0.0382
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 564 PKNH_1453800 MALIIPLLFTLATLLLHTQNVTVCSADHFGEAIRRKAFKVQRSVRGDPGVNSAITSKRVNGASTTSKGNSLLEAKKREQD 80 YFTLKINEQNFRWSLPLLMGSKKTPLELGIVTSTPITALYCSYNAKPNEEMNNIKYEVNASEGVKYISCKSRYCTAIGQG 160 NTCAPIEHFFKMIHDFGLRKKNCTNRFCTYINDINFLNVNTKLDKRNMSVCSFSSNLGSEQVEGFYFRDSFYLYDTVKFD 240 YKHFGCVTQSGVLTFNNVISGFIGLAYNRADAIANKKESSSILHTLVQKSVSKKNIFGLCFVEGGGFATFGGINNEALRK 320 VLPVSKLQMGFQHLGGEDPQATSHEIVWLAYSDTSKSTYSLLLKEVNMVSTSNRVENAIGRVAVIDSYNYFLSFPAEITA 400 KLKTAIYNSCVGNDNKCSNIINKGVFTLKNGGVDDFPTVELVFDDGKVLIHPKDYLIHEGDGVYRVLINSEETLKLGIPF 480 FLNKYLTFDNENGKIGVGPSDCTFEMKGVSPGVDLSATEADSNDDPEDKDFTIEDFFQENKLMILALTSLSVVGAIVGGV 560 FFFG 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 .... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ PKNH_1453800 34 HFGEAIR|RK 0.069 . PKNH_1453800 35 FGEAIRR|KA 0.179 . PKNH_1453800 36 GEAIRRK|AF 0.104 . PKNH_1453800 39 IRRKAFK|VQ 0.079 . PKNH_1453800 42 KAFKVQR|SV 0.229 . PKNH_1453800 45 KVQRSVR|GD 0.311 . PKNH_1453800 57 NSAITSK|RV 0.077 . PKNH_1453800 58 SAITSKR|VN 0.305 . PKNH_1453800 67 GASTTSK|GN 0.078 . PKNH_1453800 75 NSLLEAK|KR 0.063 . PKNH_1453800 76 SLLEAKK|RE 0.077 . PKNH_1453800 77 LLEAKKR|EQ 0.167 . PKNH_1453800 85 QDYFTLK|IN 0.073 . PKNH_1453800 92 INEQNFR|WS 0.093 . PKNH_1453800 102 PLLMGSK|KT 0.056 . PKNH_1453800 103 LLMGSKK|TP 0.080 . PKNH_1453800 126 YCSYNAK|PN 0.080 . PKNH_1453800 135 EEMNNIK|YE 0.062 . PKNH_1453800 145 NASEGVK|YI 0.076 . PKNH_1453800 150 VKYISCK|SR 0.076 . PKNH_1453800 152 YISCKSR|YC 0.190 . PKNH_1453800 171 PIEHFFK|MI 0.074 . PKNH_1453800 179 IHDFGLR|KK 0.062 . PKNH_1453800 180 HDFGLRK|KN 0.079 . PKNH_1453800 181 DFGLRKK|NC 0.088 . PKNH_1453800 186 KKNCTNR|FC 0.122 . PKNH_1453800 202 FLNVNTK|LD 0.061 . PKNH_1453800 205 VNTKLDK|RN 0.057 . PKNH_1453800 206 NTKLDKR|NM 0.119 . PKNH_1453800 228 VEGFYFR|DS 0.114 . PKNH_1453800 238 YLYDTVK|FD 0.069 . PKNH_1453800 242 TVKFDYK|HF 0.075 . PKNH_1453800 269 IGLAYNR|AD 0.071 . PKNH_1453800 276 ADAIANK|KE 0.064 . PKNH_1453800 277 DAIANKK|ES 0.119 . PKNH_1453800 289 LHTLVQK|SV 0.104 . PKNH_1453800 293 VQKSVSK|KN 0.064 . PKNH_1453800 294 QKSVSKK|NI 0.160 . PKNH_1453800 319 INNEALR|KV 0.102 . PKNH_1453800 320 NNEALRK|VL 0.071 . PKNH_1453800 326 KVLPVSK|LQ 0.056 . PKNH_1453800 356 AYSDTSK|ST 0.084 . PKNH_1453800 364 TYSLLLK|EV 0.077 . PKNH_1453800 374 MVSTSNR|VE 0.117 . PKNH_1453800 381 VENAIGR|VA 0.077 . PKNH_1453800 401 PAEITAK|LK 0.066 . PKNH_1453800 403 EITAKLK|TA 0.060 . PKNH_1453800 416 CVGNDNK|CS 0.063 . PKNH_1453800 423 CSNIINK|GV 0.100 . PKNH_1453800 429 KGVFTLK|NG 0.061 . PKNH_1453800 447 LVFDDGK|VL 0.057 . PKNH_1453800 453 KVLIHPK|DY 0.074 . PKNH_1453800 465 EGDGVYR|VL 0.096 . PKNH_1453800 475 NSEETLK|LG 0.056 . PKNH_1453800 484 IPFFLNK|YL 0.065 . PKNH_1453800 494 FDNENGK|IG 0.056 . PKNH_1453800 507 DCTFEMK|GV 0.106 . PKNH_1453800 529 NDDPEDK|DF 0.067 . PKNH_1453800 541 DFFQENK|LM 0.057 . ____________________________^_________________

  • Fasta :-

    >PKNH_1453800 ATGGCGCTAATTATCCCGCTGCTGTTCACCCTGGCGACACTCCTCTTGCACACACAAAAT GTAACAGTTTGTTCTGCGGATCATTTTGGCGAAGCGATCCGAAGGAAGGCTTTCAAGGTT CAACGCAGTGTAAGAGGTGACCCCGGGGTGAACTCTGCCATTACGTCCAAACGGGTGAAC GGCGCTAGTACGACGAGCAAGGGGAACTCCCTCCTAGAAGCGAAAAAAAGGGAGCAGGAC TACTTCACCTTAAAGATAAATGAACAAAATTTCAGGTGGAGTTTGCCCCTCTTGATGGGG TCGAAGAAGACACCACTTGAGTTGGGAATCGTCACGTCCACCCCGATAACTGCCCTTTAC TGTTCCTATAATGCGAAACCAAATGAAGAAATGAATAATATAAAATATGAAGTGAACGCA TCGGAAGGTGTAAAATATATAAGTTGCAAAAGTAGGTACTGCACTGCTATAGGACAAGGA AATACTTGCGCTCCAATAGAACATTTTTTCAAGATGATCCATGATTTTGGGTTGAGAAAA AAAAATTGCACCAATCGATTTTGTACCTACATAAATGATATAAATTTTTTAAATGTGAAT ACCAAGTTAGACAAGAGGAACATGTCCGTGTGTTCCTTTAGTTCAAATCTTGGTTCCGAA CAAGTAGAGGGATTTTATTTTAGAGATTCCTTTTACCTGTACGACACGGTTAAATTCGAC TACAAACACTTTGGCTGTGTAACACAGAGTGGCGTACTAACCTTCAATAATGTTATTTCT GGTTTTATCGGATTAGCATATAACCGTGCAGATGCTATTGCTAACAAGAAAGAATCCTCT TCTATCTTGCATACCCTGGTACAGAAGTCGGTGTCTAAAAAGAACATCTTTGGATTATGC TTTGTTGAAGGAGGGGGTTTTGCAACCTTCGGTGGAATTAACAATGAAGCATTAAGGAAG GTTCTCCCTGTGTCCAAGTTACAGATGGGTTTTCAACACCTGGGGGGAGAAGACCCGCAA GCCACCTCCCACGAAATTGTGTGGCTCGCATATTCAGACACGTCCAAAAGCACCTATAGT CTTCTCTTGAAAGAAGTCAACATGGTGTCGACCTCAAATAGGGTGGAAAATGCGATCGGC AGAGTAGCTGTCATCGATTCATATAATTACTTCCTATCCTTTCCAGCTGAAATCACCGCC AAGTTGAAGACCGCCATCTACAACTCCTGCGTTGGAAATGACAATAAGTGTTCCAACATC ATTAATAAGGGTGTATTCACACTGAAAAACGGAGGGGTGGATGATTTCCCTACGGTGGAG CTCGTCTTCGATGATGGGAAGGTGCTGATCCATCCTAAGGACTACCTAATCCACGAAGGC GACGGAGTTTATAGAGTTTTGATAAATTCAGAGGAAACCCTCAAATTGGGGATTCCCTTT TTCCTAAACAAGTATCTGACCTTCGACAATGAGAATGGAAAAATAGGAGTAGGCCCATCT GACTGCACCTTCGAAATGAAGGGGGTTTCTCCCGGAGTCGACCTGAGCGCTACGGAGGCG GACTCGAATGATGACCCTGAGGATAAGGACTTCACGATCGAAGACTTCTTTCAGGAGAAC AAGTTGATGATTCTGGCGCTCACTTCTTTAAGCGTTGTGGGGGCCATTGTCGGGGGCGTT TTTTTCTTCGGTTGA
  • Download Fasta

  • Fasta :-

    MALIIPLLFTLATLLLHTQNVTVCSADHFGEAIRRKAFKVQRSVRGDPGVNSAITSKRVN GASTTSKGNSLLEAKKREQDYFTLKINEQNFRWSLPLLMGSKKTPLELGIVTSTPITALY CSYNAKPNEEMNNIKYEVNASEGVKYISCKSRYCTAIGQGNTCAPIEHFFKMIHDFGLRK KNCTNRFCTYINDINFLNVNTKLDKRNMSVCSFSSNLGSEQVEGFYFRDSFYLYDTVKFD YKHFGCVTQSGVLTFNNVISGFIGLAYNRADAIANKKESSSILHTLVQKSVSKKNIFGLC FVEGGGFATFGGINNEALRKVLPVSKLQMGFQHLGGEDPQATSHEIVWLAYSDTSKSTYS LLLKEVNMVSTSNRVENAIGRVAVIDSYNYFLSFPAEITAKLKTAIYNSCVGNDNKCSNI INKGVFTLKNGGVDDFPTVELVFDDGKVLIHPKDYLIHEGDGVYRVLINSEETLKLGIPF FLNKYLTFDNENGKIGVGPSDCTFEMKGVSPGVDLSATEADSNDDPEDKDFTIEDFFQEN KLMILALTSLSVVGAIVGGVFFFG

  • title: Active site flap
  • coordinates: S214,S215,N216,L217,Q221,V222,E223,G224
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
PKNH_1453800292 SQKSVSKKNI0.994unspPKNH_1453800292 SQKSVSKKNI0.994unspPKNH_1453800292 SQKSVSKKNI0.994unspPKNH_1453800522 STEADSNDDP0.996unspPKNH_145380043 SKVQRSVRGD0.992unspPKNH_145380070 SSKGNSLLEA0.992unsp

PK12_3280c      PKH_145150      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India